BLASTX nr result

ID: Coptis25_contig00022078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022078
         (1518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [...   421   e-115
emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]   416   e-115
ref|XP_002517849.1| transcription factor, putative [Ricinus comm...   420   e-115
ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [...   416   e-114
ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trich...   405   e-110

>ref|XP_002275319.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
            gi|302143344|emb|CBI21905.3| unnamed protein product
            [Vitis vinifera]
          Length = 303

 Score =  421 bits (1082), Expect = e-115
 Identities = 207/294 (70%), Positives = 232/294 (78%), Gaps = 5/294 (1%)
 Frame = -1

Query: 1293 MAWCNDECNEDSGIERRSPSS---GPVTEEKSIVNHSKACPSCGHLIQCEEKTGIHNLPG 1123
            M WCND C+    IE  SP S     V  EK     ++ CPSCGH I+ +E+  IH+LPG
Sbjct: 1    MTWCND-CDNSRMIEGSSPPSTDNSTVIAEKPKDTATRTCPSCGHQIKLQEQARIHDLPG 59

Query: 1122 LPAGVKFDPTDQEILEHLEGKVRSDILKLHPLIDEFIPTIEGDDGICYTHPEKLPGANKE 943
            LPAGVKFDPTDQE+LEHL+GKVR D  KLHPLIDEFIPT+EG++GICYTHPEKLPG +K+
Sbjct: 60   LPAGVKFDPTDQELLEHLDGKVRCDDHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKD 119

Query: 942  GLIRHFFHRPSKAYTTGTRKRRKVQTDDDGSETRWHKTGKTRPVFVGGKTKGYKKILVLY 763
            GLIRHFFHRPSKAYTTGTRKRRKV TD DG ETRWHKTGKTRPVFVGGK KGYKKILVLY
Sbjct: 120  GLIRHFFHRPSKAYTTGTRKRRKVSTDSDGGETRWHKTGKTRPVFVGGKVKGYKKILVLY 179

Query: 762  TNYGKQRKPEKTNWVMHQYHLGNNEEERDGELVVSKVFYQTQPRQCTSSAKDLLPNSSK- 586
            TNYGKQRKPEKTNWVMHQYHLGNNEEE+DGELVVSKVFYQTQPRQC+S  KD LP+  K 
Sbjct: 180  TNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCSSIMKDSLPSKLKD 239

Query: 585  RRSGQVVPTLNDTGLVDYYS-TSVVAYDQSGHNRANQQNHIPNFIVHADGSSFL 427
              SG   P L +  LV+YY+  S +++DQ   NR +    IPNF VH DGS+FL
Sbjct: 240  HHSGHESPNLRNNALVEYYNPNSFISFDQGSQNRLSHARLIPNFTVH-DGSTFL 292


>emb|CAN77470.1| hypothetical protein VITISV_029763 [Vitis vinifera]
          Length = 796

 Score =  416 bits (1070), Expect(2) = e-115
 Identities = 200/297 (67%), Positives = 230/297 (77%), Gaps = 7/297 (2%)
 Frame = -1

Query: 1293 MAWCNDECNEDSGIERRSPSSGPVTEEKSIVNHSK-------ACPSCGHLIQCEEKTGIH 1135
            M WCND  +++  I+  S S     E+KS+++           CPSCGH I+ +++ GIH
Sbjct: 485  MTWCNDS-DDERAIQIISTSC----EDKSVIDAKADDILPTLTCPSCGHQIEFQDQAGIH 539

Query: 1134 NLPGLPAGVKFDPTDQEILEHLEGKVRSDILKLHPLIDEFIPTIEGDDGICYTHPEKLPG 955
            +LPGLPAGVKFDPTDQEILEHLE KV SD  K HPLIDEFIPT+EG++GICYTHPEKLPG
Sbjct: 540  DLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICYTHPEKLPG 599

Query: 954  ANKEGLIRHFFHRPSKAYTTGTRKRRKVQTDDDGSETRWHKTGKTRPVFVGGKTKGYKKI 775
             +K+GLIRHFFHRPSKAYTTGTRKRRKV T++DG ETRWHKTGKTRPVFVGG  KG+KKI
Sbjct: 600  VSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGGAVKGFKKI 659

Query: 774  LVLYTNYGKQRKPEKTNWVMHQYHLGNNEEERDGELVVSKVFYQTQPRQCTSSAKDLLPN 595
            LVLYTNYG+QRKPEKTNWVMHQYHLGNNEEE+DGELVVSKVFYQTQPRQC  S KD L N
Sbjct: 660  LVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGLSIKDSLDN 719

Query: 594  SSKRRSGQVVPTLNDTGLVDYYSTSVVAYDQSGHNRANQQNHIPNFIVHADGSSFLR 424
             S  RS    P +    LV+YY  S ++YDQ  HNR +    IPN +V  DGSSF+R
Sbjct: 720  KSNSRSAHDGPIIKSAALVEYYHPSFISYDQVSHNRESPPQLIPNLVVQGDGSSFIR 776



 Score = 26.6 bits (57), Expect(2) = e-115
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 1363 FGEVEGTREKGSLWDGHKSN 1304
            FGEVE   E+  +WDGH+ +
Sbjct: 462  FGEVEEPGEEIPVWDGHRGS 481


>ref|XP_002517849.1| transcription factor, putative [Ricinus communis]
            gi|223542831|gb|EEF44367.1| transcription factor,
            putative [Ricinus communis]
          Length = 294

 Score =  420 bits (1079), Expect = e-115
 Identities = 203/297 (68%), Positives = 236/297 (79%), Gaps = 8/297 (2%)
 Frame = -1

Query: 1293 MAWCNDECNEDSGIERRSPSSGPVTEEKSIVNHS------KACPSCGHLIQCEEKTGIHN 1132
            M WCND C++   IER SP+  P +   S++         + CPSCGH I+C ++  IH+
Sbjct: 1    MTWCND-CSDVQTIERSSPA--PSSNNTSVIAQRHKESLLRCCPSCGHQIKCPDQARIHD 57

Query: 1131 LPGLPAGVKFDPTDQEILEHLEGKVRSDILKLHPLIDEFIPTIEGDDGICYTHPEKLPGA 952
            LPGLPAGVKFDPTDQE+LEHLEGKV+SD  KLHPLIDEFIPTIEG++GICYTHPEKLPG 
Sbjct: 58   LPGLPAGVKFDPTDQELLEHLEGKVKSDARKLHPLIDEFIPTIEGENGICYTHPEKLPGV 117

Query: 951  NKEGLIRHFFHRPSKAYTTGTRKRRKVQTDDDGSETRWHKTGKTRPVFVGGKTKGYKKIL 772
            +K+GL+RHFFHRPSKAYTTGTRKRRKV TD +G ETRWHKTGKTRPVFVGGK KGYKKIL
Sbjct: 118  SKDGLVRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVFVGGKVKGYKKIL 177

Query: 771  VLYTNYGKQRKPEKTNWVMHQYHLGNNEEERDGELVVSKVFYQTQPRQCTSSAKDLLPNS 592
            VLYTNYGKQRKPEKTNWVMHQYHLGNNEEE+DGELVVSKVFYQTQPRQC S  KD +P+ 
Sbjct: 178  VLYTNYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGSIMKDSIPSK 237

Query: 591  SKRRSGQVVP--TLNDTGLVDYYSTSVVAYDQSGHNRANQQNHIPNFIVHADGSSFL 427
             K +S   V   +L +  LV+YY+ S +++DQ G  R N    +P+F VH DGSSF+
Sbjct: 238  LKGQSVHEVANNSLKNATLVEYYTPSFISFDQGGQTRPNPPQLLPHFAVH-DGSSFI 293


>ref|XP_002278661.1| PREDICTED: NAC domain-containing protein 8 [Vitis vinifera]
          Length = 312

 Score =  416 bits (1070), Expect = e-114
 Identities = 200/297 (67%), Positives = 230/297 (77%), Gaps = 7/297 (2%)
 Frame = -1

Query: 1293 MAWCNDECNEDSGIERRSPSSGPVTEEKSIVNHSK-------ACPSCGHLIQCEEKTGIH 1135
            M WCND  +++  I+  S S     E+KS+++           CPSCGH I+ +++ GIH
Sbjct: 1    MTWCNDS-DDERAIQIISTSC----EDKSVIDAKADDILPTLTCPSCGHQIEFQDQAGIH 55

Query: 1134 NLPGLPAGVKFDPTDQEILEHLEGKVRSDILKLHPLIDEFIPTIEGDDGICYTHPEKLPG 955
            +LPGLPAGVKFDPTDQEILEHLE KV SD  K HPLIDEFIPT+EG++GICYTHPEKLPG
Sbjct: 56   DLPGLPAGVKFDPTDQEILEHLEAKVLSDTHKTHPLIDEFIPTLEGENGICYTHPEKLPG 115

Query: 954  ANKEGLIRHFFHRPSKAYTTGTRKRRKVQTDDDGSETRWHKTGKTRPVFVGGKTKGYKKI 775
             +K+GLIRHFFHRPSKAYTTGTRKRRKV T++DG ETRWHKTGKTRPVFVGG  KG+KKI
Sbjct: 116  VSKDGLIRHFFHRPSKAYTTGTRKRRKVHTNEDGGETRWHKTGKTRPVFVGGAVKGFKKI 175

Query: 774  LVLYTNYGKQRKPEKTNWVMHQYHLGNNEEERDGELVVSKVFYQTQPRQCTSSAKDLLPN 595
            LVLYTNYG+QRKPEKTNWVMHQYHLGNNEEE+DGELVVSKVFYQTQPRQC  S KD L N
Sbjct: 176  LVLYTNYGRQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGLSIKDSLDN 235

Query: 594  SSKRRSGQVVPTLNDTGLVDYYSTSVVAYDQSGHNRANQQNHIPNFIVHADGSSFLR 424
             S  RS    P +    LV+YY  S ++YDQ  HNR +    IPN +V  DGSSF+R
Sbjct: 236  KSNSRSAHDGPIIKSAALVEYYHPSFISYDQVSHNRESPPQLIPNLVVQGDGSSFIR 292


>ref|XP_002309767.1| NAC domain protein, IPR003441 [Populus trichocarpa]
            gi|222852670|gb|EEE90217.1| NAC domain protein, IPR003441
            [Populus trichocarpa]
          Length = 298

 Score =  405 bits (1042), Expect = e-110
 Identities = 201/299 (67%), Positives = 235/299 (78%), Gaps = 10/299 (3%)
 Frame = -1

Query: 1293 MAWCNDECNEDSGIERRSPS--SGPVTEEKSIVNHSKACPSCGHLIQCEEKTGIHNLPGL 1120
            M WCND CN+   IER SP   +  V  ++      ++CPSCGH ++C+++  IH+LPGL
Sbjct: 1    MTWCND-CNDVQTIERSSPPPCNASVIAQRHKECLIRSCPSCGHQMKCQDQARIHDLPGL 59

Query: 1119 PAGVKFDPTDQEILEHLEGKVRSDILKLHPLIDEFIPTIEGDDGICYTHPEKLPGANKEG 940
            PAGVKFDPTD E+LEHLEGKV+SD  K+HPLIDEFIPTI+G++GICYTHPEKLPG +K+G
Sbjct: 60   PAGVKFDPTDLELLEHLEGKVKSDTCKVHPLIDEFIPTIDGENGICYTHPEKLPGVSKDG 119

Query: 939  LIRHFFHRPSKAYTTGTRKRRKVQTDDDGSETRWHKTGKTRPVFVGGKTKGYKKILVLYT 760
            LIRHFFHRPSKAYTTGTRKRRKV TD +G ETRWHKTGKTRPV V GK KGYKKILVLYT
Sbjct: 120  LIRHFFHRPSKAYTTGTRKRRKVHTDTEGGETRWHKTGKTRPVVVVGKVKGYKKILVLYT 179

Query: 759  NYGKQRKPEKTNWVMHQYHLGNNEEERDGELVVSKVFYQTQPRQCTSSAKDLLPNSSK-- 586
            NYGKQRKPEKTNWVMHQYHLGNNEEE+DGELVVSKVFYQTQPRQC S  KD +P  SK  
Sbjct: 180  NYGKQRKPEKTNWVMHQYHLGNNEEEKDGELVVSKVFYQTQPRQCGSLIKDSVPVPSKLK 239

Query: 585  -RRSGQVVPTL-NDTGLVDYYSTSVVAYDQSGHNRANQQNH----IPNFIVHADGSSFL 427
             + SG     L N T LV+YY+ S +++DQSG NR+   N     +P+F +H DGSS +
Sbjct: 240  VQSSGHEGSNLKNSTTLVEYYNPSFISFDQSGQNRSTNPNPPQQLLPHFALH-DGSSLI 297


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