BLASTX nr result

ID: Coptis25_contig00022073 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022073
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [V...   129   2e-28
gb|ADL36686.1| DOF domain class transcription factor [Malus x do...   128   4e-28
ref|XP_004146609.1| PREDICTED: uncharacterized protein LOC101211...   127   7e-28
dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sat...   127   1e-27
gb|AFK34059.1| unknown [Medicago truncatula]                          127   1e-27

>ref|XP_002284108.1| PREDICTED: dof zinc finger protein DOF3.4 [Vitis vinifera]
          Length = 226

 Score =  129 bits (325), Expect = 2e-28
 Identities = 61/85 (71%), Positives = 69/85 (81%), Gaps = 4/85 (4%)
 Frame = +3

Query: 126 RQPAQPCQENNQQP----LTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLR 293
           R+ A+P Q     P    L CPRC+STNTKFCYYNNYNLSQPRH+CKSCRRYWTQGGTLR
Sbjct: 8   RRVARPQQVGGHPPQSEHLPCPRCDSTNTKFCYYNNYNLSQPRHFCKSCRRYWTQGGTLR 67

Query: 294 NIPVGGGTRKNNPKRSRTINIATTS 368
           NIPVGGGTRKN+ KRSRT   +++S
Sbjct: 68  NIPVGGGTRKNS-KRSRTATSSSSS 91


>gb|ADL36686.1| DOF domain class transcription factor [Malus x domestica]
          Length = 241

 Score =  128 bits (322), Expect = 4e-28
 Identities = 61/94 (64%), Positives = 67/94 (71%), Gaps = 5/94 (5%)
 Frame = +3

Query: 102 QSDSICQNRQPAQPCQENNQQP-----LTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRR 266
           Q     QNR+  +  Q     P     L CPRC+STNTKFCYYNNYN SQPRH+CKSCRR
Sbjct: 8   QQQKSSQNRRTVKDAQATGAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRR 67

Query: 267 YWTQGGTLRNIPVGGGTRKNNPKRSRTINIATTS 368
           YWT GGTLR+IPVGGGTRKN  KRSRT   ATT+
Sbjct: 68  YWTHGGTLRDIPVGGGTRKNT-KRSRTATSATTT 100


>ref|XP_004146609.1| PREDICTED: uncharacterized protein LOC101211189 [Cucumis sativus]
           gi|449508912|ref|XP_004163442.1| PREDICTED:
           uncharacterized LOC101211189 [Cucumis sativus]
          Length = 351

 Score =  127 bits (320), Expect = 7e-28
 Identities = 54/87 (62%), Positives = 69/87 (79%)
 Frame = +3

Query: 108 DSICQNRQPAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGT 287
           D+  Q  Q  Q  Q++ Q+PL CPRC+S+NTKFCYYNNY+LSQPRH+CK+C+RYWT+GGT
Sbjct: 51  DNNKQQDQKTQQKQQHQQEPLRCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGT 110

Query: 288 LRNIPVGGGTRKNNPKRSRTINIATTS 368
           LRN+PVGGG RKN   +  TI+  TT+
Sbjct: 111 LRNVPVGGGCRKNKRLKRPTISSTTTT 137


>dbj|BAC81662.1| DNA binding with one finger 5 protein [Pisum sativum]
          Length = 234

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/86 (69%), Positives = 67/86 (77%)
 Frame = +3

Query: 111 SICQNRQPAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTL 290
           SI    +P  P  E  Q+ L CPRC+STNTKFCYYNNYN SQPRH CK+CRRYWT GGTL
Sbjct: 12  SIKPQNRPGAPAPE--QENLPCPRCDSTNTKFCYYNNYNYSQPRHLCKACRRYWTHGGTL 69

Query: 291 RNIPVGGGTRKNNPKRSRTINIATTS 368
           R+IPVGGGTRK N KRSRT ++A TS
Sbjct: 70  RDIPVGGGTRK-NAKRSRTHHVAVTS 94


>gb|AFK34059.1| unknown [Medicago truncatula]
          Length = 229

 Score =  127 bits (318), Expect = 1e-27
 Identities = 58/80 (72%), Positives = 66/80 (82%)
 Frame = +3

Query: 129 QPAQPCQENNQQPLTCPRCESTNTKFCYYNNYNLSQPRHYCKSCRRYWTQGGTLRNIPVG 308
           +P  P  E  Q+ L CPRC+STNTKFCYYNNYN SQPRH+CK+CRRYWT GGTLR+IPVG
Sbjct: 18  RPGAPAPE--QENLPCPRCDSTNTKFCYYNNYNYSQPRHFCKACRRYWTHGGTLRDIPVG 75

Query: 309 GGTRKNNPKRSRTINIATTS 368
           GGTRK N KRSRT ++A TS
Sbjct: 76  GGTRK-NAKRSRTNHVAVTS 94


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