BLASTX nr result

ID: Coptis25_contig00022062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022062
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACD99685.1| histone H1-like protein [Camellia sinensis]            100   2e-19
ref|XP_002884107.1| hypothetical protein ARALYDRAFT_480711 [Arab...    99   9e-19
ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis] g...    97   4e-18
gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]         96   6e-18
ref|XP_002327673.1| histone H1 [Populus trichocarpa] gi|22283675...    96   6e-18

>gb|ACD99685.1| histone H1-like protein [Camellia sinensis]
          Length = 207

 Score =  100 bits (250), Expect = 2e-19
 Identities = 50/64 (78%), Positives = 57/64 (89%)
 Frame = -1

Query: 595 MIKEALMALKERTGSSPYAIAKYVEENHKDILSENFKKILTTQLKNNIAKGKLIKIKASY 416
           MIKEAL+AL E++GSSPYAIAKY+EE HK +L ENF+KIL  QLKN+ AKGKLIKIKASY
Sbjct: 59  MIKEALLALNEKSGSSPYAIAKYMEEEHKPVLPENFRKILGLQLKNSAAKGKLIKIKASY 118

Query: 415 KLSE 404
           KLSE
Sbjct: 119 KLSE 122


>ref|XP_002884107.1| hypothetical protein ARALYDRAFT_480711 [Arabidopsis lyrata subsp.
           lyrata] gi|297329947|gb|EFH60366.1| hypothetical protein
           ARALYDRAFT_480711 [Arabidopsis lyrata subsp. lyrata]
          Length = 161

 Score = 99.0 bits (245), Expect = 9e-19
 Identities = 47/64 (73%), Positives = 58/64 (90%)
 Frame = -1

Query: 595 MIKEALMALKERTGSSPYAIAKYVEENHKDILSENFKKILTTQLKNNIAKGKLIKIKASY 416
           MIKEALMALKE+ GSSPYAIAK +EE HK +L E+F+KIL+ QLKN++AKGKL+KI+ASY
Sbjct: 30  MIKEALMALKEKNGSSPYAIAKKIEEKHKSLLPESFRKILSLQLKNSVAKGKLVKIRASY 89

Query: 415 KLSE 404
           KLS+
Sbjct: 90  KLSD 93


>ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis]
           gi|223528872|gb|EEF30873.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 213

 Score = 96.7 bits (239), Expect = 4e-18
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = -1

Query: 595 MIKEALMALKERTGSSPYAIAKYVEENHKDILSENFKKILTTQLKNNIAKGKLIKIKASY 416
           MIKEAL+ L E++GSSPYAIAKY+EE HK +L  NFKKIL  QLKN+ A+GKLIKI+ASY
Sbjct: 58  MIKEALLTLNEKSGSSPYAIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRASY 117

Query: 415 KLSE 404
           KLSE
Sbjct: 118 KLSE 121


>gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
          Length = 202

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = -1

Query: 595 MIKEALMALKERTGSSPYAIAKYVEENHKDILSENFKKILTTQLKNNIAKGKLIKIKASY 416
           MIKEAL+AL E+ GSSPYA+AKY+E+ HKD L  NF+KIL  QLKN+ AKGKLIKIKASY
Sbjct: 55  MIKEALLALNEKGGSSPYAVAKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASY 114

Query: 415 KLSE 404
           KLSE
Sbjct: 115 KLSE 118


>ref|XP_002327673.1| histone H1 [Populus trichocarpa] gi|222836758|gb|EEE75151.1|
           histone H1 [Populus trichocarpa]
          Length = 202

 Score = 96.3 bits (238), Expect = 6e-18
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 595 MIKEALMALKERTGSSPYAIAKYVEENHKDILSENFKKILTTQLKNNIAKGKLIKIKASY 416
           MIKEA++AL E++GSSPYAIAKY+EE HK +L  NFKKIL  QLKN+ A+GKLIKI+ASY
Sbjct: 59  MIKEAILALNEKSGSSPYAIAKYMEEKHKAVLPANFKKILGLQLKNSAARGKLIKIRASY 118

Query: 415 KLSE 404
           KLSE
Sbjct: 119 KLSE 122


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