BLASTX nr result

ID: Coptis25_contig00022054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022054
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycin...   197   2e-48
gb|AFK40972.1| unknown [Medicago truncatula]                          195   6e-48
ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatul...   195   6e-48
ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatul...   195   6e-48
ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260...   189   4e-46

>ref|NP_001240057.1| uncharacterized protein LOC100787790 [Glycine max]
           gi|255636705|gb|ACU18688.1| unknown [Glycine max]
          Length = 441

 Score =  197 bits (500), Expect = 2e-48
 Identities = 116/207 (56%), Positives = 133/207 (64%), Gaps = 11/207 (5%)
 Frame = -1

Query: 590 IQVEMPTVWMSFKKSLHCRSELSDVHD-SSRNNLSSILTMKTGRSGCSRSISNLRDVIHG 414
           ++  MPTVW S KKSLHC+SE SDVHD  +R  LS+ILT + GRSGCSRSI+NL+DVIHG
Sbjct: 13  VKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKQLSTILTKRAGRSGCSRSIANLKDVIHG 72

Query: 413 SKRHLDKAPICSPRSIGSSELINPIAHEVVLSDSRCELKITGF----INGTNEGGCGSNA 246
           SKRHLDK P CSPRSIGSSE +NPI HEV+LS+SRCELKITG+      G   GG GSNA
Sbjct: 73  SKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGGVGSGGGGSNA 132

Query: 245 --GSTFVGTLRXXXXXXXGSHTMHPQSPPFMXXXXXXXXXXXPLTNGRRSRLKTSATFGD 72
             GSTFVGTLR       G  TMH  +P F              T  R+S   +S   G 
Sbjct: 133 GGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSS----------TPPRKSPFLSSDKEGS 182

Query: 71  G----GLSSNFKSSYAVSSNGSSIVTC 3
           G    GL S+ + S    SNGSS VTC
Sbjct: 183 GPHGAGLHSSNRLSLETDSNGSSTVTC 209


>gb|AFK40972.1| unknown [Medicago truncatula]
          Length = 437

 Score =  195 bits (496), Expect = 6e-48
 Identities = 111/210 (52%), Positives = 133/210 (63%), Gaps = 9/210 (4%)
 Frame = -1

Query: 605 WKERIIQVEMPTVWMSFKKSLHCRSELSDVHD-SSRNNLSSILTMKTG--RSGCSRSISN 435
           +KE+  +  MPTVW S KKSLHC+SE SDVHD  +R +LS+ILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 434 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEVVLSDSRCELKITGFINGTN----- 270
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HEV+LS+SRCELKITGF  G N     
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGNN 121

Query: 269 -EGGCGSNAGSTFVGTLRXXXXXXXGSHTMHPQSPPFMXXXXXXXXXXXPLTNGRRSRLK 93
             GG  S   ST+VGTLR       G  TMH  +P F             L+ G      
Sbjct: 122 ASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEG------ 175

Query: 92  TSATFGDGGLSSNFKSSYAVSSNGSSIVTC 3
           ++   G GG+ S+ + S    SNGSS VTC
Sbjct: 176 SNGFHGGGGVHSSNRMSLETDSNGSSTVTC 205


>ref|XP_003607709.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|355508764|gb|AES89906.1| C2H2 zinc finger protein
           [Medicago truncatula]
          Length = 231

 Score =  195 bits (496), Expect = 6e-48
 Identities = 111/210 (52%), Positives = 133/210 (63%), Gaps = 9/210 (4%)
 Frame = -1

Query: 605 WKERIIQVEMPTVWMSFKKSLHCRSELSDVHD-SSRNNLSSILTMKTG--RSGCSRSISN 435
           +KE+  +  MPTVW S KKSLHC+SE SDVHD  +R +LS+ILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 434 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEVVLSDSRCELKITGFINGTN----- 270
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HEV+LS+SRCELKITGF  G N     
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGNN 121

Query: 269 -EGGCGSNAGSTFVGTLRXXXXXXXGSHTMHPQSPPFMXXXXXXXXXXXPLTNGRRSRLK 93
             GG  S   ST+VGTLR       G  TMH  +P F             L+ G      
Sbjct: 122 ASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEG------ 175

Query: 92  TSATFGDGGLSSNFKSSYAVSSNGSSIVTC 3
           ++   G GG+ S+ + S    SNGSS VTC
Sbjct: 176 SNGFHGGGGVHSSNRMSLETDSNGSSTVTC 205


>ref|XP_003607708.1| C2H2 zinc finger protein [Medicago truncatula]
           gi|358345288|ref|XP_003636713.1| C2H2 zinc finger
           protein [Medicago truncatula]
           gi|355502648|gb|AES83851.1| C2H2 zinc finger protein
           [Medicago truncatula] gi|355508763|gb|AES89905.1| C2H2
           zinc finger protein [Medicago truncatula]
          Length = 437

 Score =  195 bits (496), Expect = 6e-48
 Identities = 111/210 (52%), Positives = 133/210 (63%), Gaps = 9/210 (4%)
 Frame = -1

Query: 605 WKERIIQVEMPTVWMSFKKSLHCRSELSDVHD-SSRNNLSSILTMKTG--RSGCSRSISN 435
           +KE+  +  MPTVW S KKSLHC+SE SDVHD  +R +LS+ILT K G  RSGCSRSI+N
Sbjct: 2   YKEKTKKGNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKKGGGGRSGCSRSIAN 61

Query: 434 LRDVIHGSKRHLDKAPICSPRSIGSSELINPIAHEVVLSDSRCELKITGFINGTN----- 270
           L+DVIHGSKRH++K P CSPRSIGSSE +NPI HEV+LS+SRCELKITGF  G N     
Sbjct: 62  LKDVIHGSKRHIEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFQEGINGGGNN 121

Query: 269 -EGGCGSNAGSTFVGTLRXXXXXXXGSHTMHPQSPPFMXXXXXXXXXXXPLTNGRRSRLK 93
             GG  S   ST+VGTLR       G  TMH  +P F             L+ G      
Sbjct: 122 ASGGSSSGGSSTYVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSEG------ 175

Query: 92  TSATFGDGGLSSNFKSSYAVSSNGSSIVTC 3
           ++   G GG+ S+ + S    SNGSS VTC
Sbjct: 176 SNGFHGGGGVHSSNRMSLETDSNGSSTVTC 205


>ref|XP_002282818.2| PREDICTED: uncharacterized protein LOC100260605 [Vitis vinifera]
          Length = 483

 Score =  189 bits (480), Expect = 4e-46
 Identities = 109/205 (53%), Positives = 130/205 (63%), Gaps = 13/205 (6%)
 Frame = -1

Query: 578 MPTVWMSFKKSLHCRSELSDVHD-SSRNNLSSILTMKTGRSGCSRSISNLRDVIHGSKRH 402
           MPTVW+S ++SLHC+SE SDVHD  +R  LS+ILT K  RSGCSRSI+NL+DVIHGSKRH
Sbjct: 55  MPTVWLSLRRSLHCKSEPSDVHDPKARRQLSTILTKKPCRSGCSRSIANLKDVIHGSKRH 114

Query: 401 LDKAPICSPRSIGSSELINPIAHEVVLSDSRCELKITGF------INGTNEGGCGSNAGS 240
           ++K P CSPRSIGSSE +NPI HEV+LS+SRCELKITGF        G   GG G+  GS
Sbjct: 115 MEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQEGGGGGGGGGVGTGGGS 174

Query: 239 TFVGTLRXXXXXXXGSHTMH----PQSPPFMXXXXXXXXXXXPLTNGRRSRLKTSATF-- 78
           TFVGTLR       G  TMH    P +PP              L++   S    S  F  
Sbjct: 175 TFVGTLRPGTPGPGGHPTMHYFKSPSTPP--------RKSPFLLSDREGSGFGGSTIFGG 226

Query: 77  GDGGLSSNFKSSYAVSSNGSSIVTC 3
           G G + SN ++S    SNG+S VTC
Sbjct: 227 GSGAIHSNNRASLDTDSNGTSAVTC 251


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