BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022037
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ...   263   3e-68
ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arab...   249   5e-64
ref|NP_177060.3| putative U-box domain-containing protein 42 [Ar...   243   3e-62
ref|NP_001154461.2| putative U-box domain-containing protein 42 ...   243   3e-62
ref|NP_001154460.1| putative U-box domain-containing protein 42 ...   243   3e-62

>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
            vinifera]
          Length = 1055

 Score =  263 bits (671), Expect = 3e-68
 Identities = 136/236 (57%), Positives = 171/236 (72%), Gaps = 1/236 (0%)
 Frame = -1

Query: 705  GNTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFISR-VHNELMNSTEESTEIL 529
            GNT  +KAAFKAL QISSYH N + +VEAGIV I+++E+   R +HNE MNS +E+  IL
Sbjct: 565  GNTLTKKAAFKALEQISSYHPNGKILVEAGIVQIVVEEMLTPRKIHNETMNSIKEAAAIL 624

Query: 528  ANILESGITLDNLEVNTHGHTMGSKYIVYNLIEMLKQSNSETLQFNLINIFLCLLXXXXX 349
             N+LESGI  +NL+VNTHGHTMGS YIVY++I MLK S  + L  NLI I LCL      
Sbjct: 625  GNLLESGIEFENLQVNTHGHTMGSDYIVYSIIHMLKNSTPDKLNTNLIRILLCLAKSPKS 684

Query: 348  XXXXXXXXXXXXXSYTLIGLINSPHEELRTAATKLLISLTPYMGHSLADRLCKIKGQPES 169
                         SYTLI LIN+PHEEL  A+ KLLI+L+PY+GH+ A+RLCK +GQP+S
Sbjct: 685  NATIVSVVRETEASYTLIELINNPHEELGIASMKLLITLSPYLGHTFAERLCKTRGQPQS 744

Query: 168  LIKSPRETCQITENHAVSANFLAKLPAQNLTLNLALLHKETVPTVIQTINEFQRSG 1
            L++SP  T QIT+  AVSANFLA LP QNL LNLALL  ++VP ++Q+I++ QRSG
Sbjct: 745  LLQSPGGTNQITQKQAVSANFLADLPHQNLRLNLALLSNDSVPMILQSIHQMQRSG 800


>ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arabidopsis lyrata subsp.
            lyrata] gi|297334534|gb|EFH64952.1| hypothetical protein
            ARALYDRAFT_339138 [Arabidopsis lyrata subsp. lyrata]
          Length = 1032

 Score =  249 bits (635), Expect = 5e-64
 Identities = 128/234 (54%), Positives = 163/234 (69%)
 Frame = -1

Query: 702  NTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFISRVHNELMNSTEESTEILAN 523
            NT AR+AAFKAL  IS YH NN+ +VE GI+ I+++E+F  RV ++LMNS  E+  ILAN
Sbjct: 545  NTDARRAAFKALAHISLYHPNNQILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILAN 604

Query: 522  ILESGITLDNLEVNTHGHTMGSKYIVYNLIEMLKQSNSETLQFNLINIFLCLLXXXXXXX 343
            ILESG+  +  EVNTHGHT+GS Y VYN+I+MLK S+ + L  NLI I L L        
Sbjct: 605  ILESGLEHETFEVNTHGHTLGSDYFVYNIIQMLKNSSPDDLNINLIRILLSLSKSPRAMA 664

Query: 342  XXXXXXXXXXXSYTLIGLINSPHEELRTAATKLLISLTPYMGHSLADRLCKIKGQPESLI 163
                       S+ +I LIN+PHEEL   A KLLI+LTPY+GH+L++RLCK +GQPE+LI
Sbjct: 665  TIVSVIKETDASFAMIELINNPHEELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLI 724

Query: 162  KSPRETCQITENHAVSANFLAKLPAQNLTLNLALLHKETVPTVIQTINEFQRSG 1
            + P E  QITE HAVSA  LAKLP QNLTLNLAL+++  V  ++  I+  QRSG
Sbjct: 725  QCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSG 778


>ref|NP_177060.3| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
            gi|75333632|sp|Q9CAA7.1|PUB42_ARATH RecName:
            Full=Putative U-box domain-containing protein 42;
            AltName: Full=Plant U-box protein 42
            gi|12323215|gb|AAG51587.1|AC011665_8 hypothetical protein
            [Arabidopsis thaliana] gi|332196744|gb|AEE34865.1|
            putative U-box domain-containing protein 42 [Arabidopsis
            thaliana]
          Length = 1033

 Score =  243 bits (620), Expect = 3e-62
 Identities = 125/234 (53%), Positives = 161/234 (68%)
 Frame = -1

Query: 702  NTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFISRVHNELMNSTEESTEILAN 523
            N  AR+AAFKAL  IS YH NN+ +VE GI+ I+++E+F  RV ++LMNS  E+  ILAN
Sbjct: 546  NIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILAN 605

Query: 522  ILESGITLDNLEVNTHGHTMGSKYIVYNLIEMLKQSNSETLQFNLINIFLCLLXXXXXXX 343
            ILESG+  +  EVNTHGHT+GS Y VYN+I MLK S+ + L  +LI I L L        
Sbjct: 606  ILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMA 665

Query: 342  XXXXXXXXXXXSYTLIGLINSPHEELRTAATKLLISLTPYMGHSLADRLCKIKGQPESLI 163
                       S+ +I LIN+PH+EL   A KLLI+LTPY+GH+L++RLCK +GQPE+LI
Sbjct: 666  TIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLI 725

Query: 162  KSPRETCQITENHAVSANFLAKLPAQNLTLNLALLHKETVPTVIQTINEFQRSG 1
            + P E  QITE HAVSA  LAKLP QNLTLNLAL+++  V  ++  I+  QRSG
Sbjct: 726  QCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSG 779


>ref|NP_001154461.2| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
            gi|332196746|gb|AEE34867.1| putative U-box
            domain-containing protein 42 [Arabidopsis thaliana]
          Length = 1061

 Score =  243 bits (620), Expect = 3e-62
 Identities = 125/234 (53%), Positives = 161/234 (68%)
 Frame = -1

Query: 702  NTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFISRVHNELMNSTEESTEILAN 523
            N  AR+AAFKAL  IS YH NN+ +VE GI+ I+++E+F  RV ++LMNS  E+  ILAN
Sbjct: 546  NIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILAN 605

Query: 522  ILESGITLDNLEVNTHGHTMGSKYIVYNLIEMLKQSNSETLQFNLINIFLCLLXXXXXXX 343
            ILESG+  +  EVNTHGHT+GS Y VYN+I MLK S+ + L  +LI I L L        
Sbjct: 606  ILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMA 665

Query: 342  XXXXXXXXXXXSYTLIGLINSPHEELRTAATKLLISLTPYMGHSLADRLCKIKGQPESLI 163
                       S+ +I LIN+PH+EL   A KLLI+LTPY+GH+L++RLCK +GQPE+LI
Sbjct: 666  TIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLI 725

Query: 162  KSPRETCQITENHAVSANFLAKLPAQNLTLNLALLHKETVPTVIQTINEFQRSG 1
            + P E  QITE HAVSA  LAKLP QNLTLNLAL+++  V  ++  I+  QRSG
Sbjct: 726  QCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSG 779


>ref|NP_001154460.1| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
            gi|332196745|gb|AEE34866.1| putative U-box
            domain-containing protein 42 [Arabidopsis thaliana]
          Length = 1035

 Score =  243 bits (620), Expect = 3e-62
 Identities = 125/234 (53%), Positives = 161/234 (68%)
 Frame = -1

Query: 702  NTSARKAAFKALVQISSYHQNNRTIVEAGIVPILIQELFISRVHNELMNSTEESTEILAN 523
            N  AR+AAFKAL  IS YH NN+ +VE GI+ I+++E+F  RV ++LMNS  E+  ILAN
Sbjct: 546  NIDARRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILAN 605

Query: 522  ILESGITLDNLEVNTHGHTMGSKYIVYNLIEMLKQSNSETLQFNLINIFLCLLXXXXXXX 343
            ILESG+  +  EVNTHGHT+GS Y VYN+I MLK S+ + L  +LI I L L        
Sbjct: 606  ILESGLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMA 665

Query: 342  XXXXXXXXXXXSYTLIGLINSPHEELRTAATKLLISLTPYMGHSLADRLCKIKGQPESLI 163
                       S+ +I LIN+PH+EL   A KLLI+LTPY+GH+L++RLCK +GQPE+LI
Sbjct: 666  TIVSVIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLI 725

Query: 162  KSPRETCQITENHAVSANFLAKLPAQNLTLNLALLHKETVPTVIQTINEFQRSG 1
            + P E  QITE HAVSA  LAKLP QNLTLNLAL+++  V  ++  I+  QRSG
Sbjct: 726  QCPVEANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSG 779