BLASTX nr result

ID: Coptis25_contig00022031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022031
         (1252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267...   318   2e-84
emb|CBI32668.3| unnamed protein product [Vitis vinifera]              297   3e-78
ref|XP_002533008.1| conserved hypothetical protein [Ricinus comm...   291   2e-76
ref|XP_003553529.1| PREDICTED: uncharacterized protein LOC100778...   281   2e-73
ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73

>ref|XP_002277967.1| PREDICTED: uncharacterized protein LOC100267054 [Vitis vinifera]
          Length = 351

 Score =  318 bits (814), Expect = 2e-84
 Identities = 164/288 (56%), Positives = 216/288 (75%), Gaps = 13/288 (4%)
 Frame = -2

Query: 996 KNHHIPKQ------LP-LLKTTCMTIATAALFFSSFT-KPSIATPIPQPIP----EQETV 853
           ++H  PK       LP   K +C+ IA AA+FF+ F  KP IA P     P      ++V
Sbjct: 64  QDHQNPKSPFFETLLPHFFKASCIAIAAAAVFFARFNVKPVIAAPAATVEPFKQSTMDSV 123

Query: 852 PEDEQEKILEQRLSTNPEDVDTLRSLMEIKLKNQNLLEAISIVDKLVQIEPLEKQWCLLR 673
            ++E+E+ +E+ + ++P+DV+ L+SLME+K+KN+ L EA+ ++++L+Q+EP +K+W LL+
Sbjct: 124 SDEEKERTVEEYVESHPDDVEGLKSLMEVKIKNRKLQEAVDVIERLIQLEPDDKEWPLLK 183

Query: 672 AHLYSYSGEVELAKMSFEEILEDDPLFVEAYHGLTMTVSQGESG-ELEILVKRIENAMGQ 496
           AHLYSYSGE ELAK+ FEEIL  +PL VEAYHGL M VSQ +SG EL  ++KRIE AM +
Sbjct: 184 AHLYSYSGESELAKLGFEEILSANPLTVEAYHGLVMAVSQSDSGDELNQVLKRIEAAMER 243

Query: 495 CKKQKRNEDLRDFKLLVGQIRFIEGNYVDALKVYQELVKEEPRDFRPYLYQGIIYTLLRQ 316
           CKK+K+ EDLRDFKLLV QIR IEG Y DALKVYQELVKEEPRDFRPYL QGIIYTLLR+
Sbjct: 244 CKKEKKKEDLRDFKLLVAQIRVIEGKYNDALKVYQELVKEEPRDFRPYLCQGIIYTLLRK 303

Query: 315 TDNAKKQFEKYQRLVPKDHPYARQFEDNIMGSQAFREMMGNQNASSMS 172
            D A+KQF+KY+RLVPK HPYAR F+DN++ ++ F +M  NQ + S S
Sbjct: 304 KDEAEKQFQKYRRLVPKGHPYARYFDDNMIATRVFSQMAENQRSGSKS 351


>emb|CBI32668.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  297 bits (761), Expect = 3e-78
 Identities = 149/245 (60%), Positives = 195/245 (79%), Gaps = 6/245 (2%)
 Frame = -2

Query: 933 AALFFSSFT-KPSIATPIPQPIP----EQETVPEDEQEKILEQRLSTNPEDVDTLRSLME 769
           AA+FF+ F  KP IA P     P      ++V ++E+E+ +E+ + ++P+DV+ L+SLME
Sbjct: 61  AAVFFARFNVKPVIAAPAATVEPFKQSTMDSVSDEEKERTVEEYVESHPDDVEGLKSLME 120

Query: 768 IKLKNQNLLEAISIVDKLVQIEPLEKQWCLLRAHLYSYSGEVELAKMSFEEILEDDPLFV 589
           +K+KN+ L EA+ ++++L+Q+EP +K+W LL+AHLYSYSGE ELAK+ FEEIL  +PL V
Sbjct: 121 VKIKNRKLQEAVDVIERLIQLEPDDKEWPLLKAHLYSYSGESELAKLGFEEILSANPLTV 180

Query: 588 EAYHGLTMTVSQGESG-ELEILVKRIENAMGQCKKQKRNEDLRDFKLLVGQIRFIEGNYV 412
           EAYHGL M VSQ +SG EL  ++KRIE AM +CKK+K+ EDLRDFKLLV QIR IEG Y 
Sbjct: 181 EAYHGLVMAVSQSDSGDELNQVLKRIEAAMERCKKEKKKEDLRDFKLLVAQIRVIEGKYN 240

Query: 411 DALKVYQELVKEEPRDFRPYLYQGIIYTLLRQTDNAKKQFEKYQRLVPKDHPYARQFEDN 232
           DALKVYQELVKEEPRDFRPYL QGIIYTLLR+ D A+KQF+KY+RLVPK HPYAR F+DN
Sbjct: 241 DALKVYQELVKEEPRDFRPYLCQGIIYTLLRKKDEAEKQFQKYRRLVPKGHPYARYFDDN 300

Query: 231 IMGSQ 217
           ++ ++
Sbjct: 301 MIATR 305


>ref|XP_002533008.1| conserved hypothetical protein [Ricinus communis]
            gi|223527219|gb|EEF29383.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 341

 Score =  291 bits (746), Expect = 2e-76
 Identities = 157/332 (47%), Positives = 225/332 (67%), Gaps = 21/332 (6%)
 Frame = -2

Query: 1104 KPLHFSLNPHXXXXXXXXXXXXXXXXKTNLFLKASLKNHHIPKQL---------PLLKTT 952
            +PL+ S NP+                 ++ F   S+K +  P+           P+L+TT
Sbjct: 12   QPLNLSFNPNRPSFTKPIFSLPIRTPSSSPFKTLSIKAYKTPQNPEPSLLRTLNPILRTT 71

Query: 951  CMTI-ATAALFFSS--FTKPSIATPI----PQPIPEQETVPED----EQEKILEQRLSTN 805
            C+T+ ATAALFF +    KP+IA P+    P   P +++ P +    EQE+ LE RL+ N
Sbjct: 72   CITLTATAALFFFNNLHKKPAIAAPVTASPPAVEPAEQSSPSNVSFQEQERALEDRLARN 131

Query: 804  PEDVDTLRSLMEIKLKNQNLLEAISIVDKLVQIEPLEKQWCLLRAHLYSYSGEVELAKMS 625
            P D+DTLRSLME+++K++ LL+AI +VD+L+++EP E +W LL++ ++SYSG+ E A+  
Sbjct: 132  PNDIDTLRSLMEVRIKSRKLLQAIEVVDRLIELEPDEDEWPLLKSQIFSYSGDFESARKG 191

Query: 624  FEEILEDDPLFVEAYHGLTMTVSQGESGE-LEILVKRIENAMGQCKKQKRNEDLRDFKLL 448
            FEEILE DPL VEAYHGL M  +  ESG+ ++ ++KRIE+AM +C+K+K+  DLRDFKLL
Sbjct: 192  FEEILEKDPLRVEAYHGLVM--AHAESGDSVDKVLKRIESAMDKCRKEKKKSDLRDFKLL 249

Query: 447  VGQIRFIEGNYVDALKVYQELVKEEPRDFRPYLYQGIIYTLLRQTDNAKKQFEKYQRLVP 268
            + QIR +E  YVDAL VY+ELVKEEPRDFRPYL QGIIYTLLR+ + A+K+FE++++LVP
Sbjct: 250  IAQIRVMEEKYVDALNVYEELVKEEPRDFRPYLCQGIIYTLLRKKEEAEKKFEQFRKLVP 309

Query: 267  KDHPYARQFEDNIMGSQAFREMMGNQNASSMS 172
            K+HPY   F DN+  +  F E +  + A + S
Sbjct: 310  KNHPYREFFLDNMFATTFFSEKVQREGAGASS 341


>ref|XP_003553529.1| PREDICTED: uncharacterized protein LOC100778644 [Glycine max]
          Length = 351

 Score =  281 bits (719), Expect = 2e-73
 Identities = 138/267 (51%), Positives = 195/267 (73%), Gaps = 3/267 (1%)
 Frame = -2

Query: 969 PLLKTTCMTIATAALFFSSF--TKPSIATPIPQPIPEQETV-PEDEQEKILEQRLSTNPE 799
           P+++TTC+ IA AALFF  F  T P+IA P+  P  E +T   E+E E +LE+RLSTNP 
Sbjct: 84  PVVETTCIVIAAAALFFMRFHHTPPAIAAPLTPPAAESDTAFTEEEAESLLEERLSTNPR 143

Query: 798 DVDTLRSLMEIKLKNQNLLEAISIVDKLVQIEPLEKQWCLLRAHLYSYSGEVELAKMSFE 619
           D D L +LME+K++ + + EA  ++D+L+++EP E +W LL+A+++ Y+ +   A+  FE
Sbjct: 144 DTDALHALMEVKIRARKMDEAFGVLDRLIELEPEELEWPLLKANMHIYNDDHASARELFE 203

Query: 618 EILEDDPLFVEAYHGLTMTVSQGESGELEILVKRIENAMGQCKKQKRNEDLRDFKLLVGQ 439
           EIL+ DPL VEA+HGL M  SQ     L+ L+KR+E A+  CKKQKR+ D+RDF+LL+ Q
Sbjct: 204 EILKKDPLRVEAFHGLVMATSQSNE-PLKGLLKRVEEAIEVCKKQKRDSDVRDFRLLIAQ 262

Query: 438 IRFIEGNYVDALKVYQELVKEEPRDFRPYLYQGIIYTLLRQTDNAKKQFEKYQRLVPKDH 259
           ++ +EG++ +ALK YQELVKEEPRDFRPYL QGIIYTLLR+ D A KQF+K++RLVPKDH
Sbjct: 263 VKVMEGDFSEALKAYQELVKEEPRDFRPYLCQGIIYTLLRKKDEADKQFDKFRRLVPKDH 322

Query: 258 PYARQFEDNIMGSQAFREMMGNQNASS 178
           PY   FEDN+  ++ F + +  + A +
Sbjct: 323 PYKDYFEDNMFATKFFSQKLEREGAGA 349


>ref|XP_002308480.1| predicted protein [Populus trichocarpa] gi|222854456|gb|EEE92003.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  279 bits (714), Expect = 9e-73
 Identities = 149/320 (46%), Positives = 211/320 (65%), Gaps = 20/320 (6%)
 Frame = -2

Query: 1104 KPLHFSLNPHXXXXXXXXXXXXXXXXKTN---LFLKASLKNHHIPKQLPL-------LKT 955
            +PL+ SLNPH                  +     L  S++     +  PL       +KT
Sbjct: 7    QPLNLSLNPHRPSFPNPIVSLTFKTPPPSSSPFKLSTSIRASSSSRITPLNQSLTTIIKT 66

Query: 954  TCMTI-ATAALFFSSF-TKPSIATPI--------PQPIPEQETVPEDEQEKILEQRLSTN 805
            T +T+ A A LFF+ F +KP+IA+P+        P     +E V  +EQE+ L+  L+ N
Sbjct: 67   TSITLTAAAVLFFTRFNSKPAIASPVAASSSTADPTKESSKENVSFEEQERALQDHLAQN 126

Query: 804  PEDVDTLRSLMEIKLKNQNLLEAISIVDKLVQIEPLEKQWCLLRAHLYSYSGEVELAKMS 625
            P DV+ LRSLME+++K++ L EAI +VD+L+++EP E +W LL++ +Y+YSG+ E AK  
Sbjct: 127  PSDVEALRSLMEVRIKSKKLQEAIEVVDRLIELEPNEDEWPLLKSQIYTYSGDFESAKDG 186

Query: 624  FEEILEDDPLFVEAYHGLTMTVSQGESGELEILVKRIENAMGQCKKQKRNEDLRDFKLLV 445
            FE +L+ DPL VEAYHGL M  S+   G LE+++KRIE+AM +CKK+K+N DLRDFKLL+
Sbjct: 187  FEAVLQKDPLRVEAYHGLVMANSE-SGGSLEVVLKRIESAMNKCKKEKKNSDLRDFKLLI 245

Query: 444  GQIRFIEGNYVDALKVYQELVKEEPRDFRPYLYQGIIYTLLRQTDNAKKQFEKYQRLVPK 265
             Q+R +E  Y DALKVY+ELVKEEPRDFRPYL QG+IYTLLR+ D A+K+FE++++LVPK
Sbjct: 246  AQVRVMEEKYFDALKVYEELVKEEPRDFRPYLCQGMIYTLLRKKDEAEKKFEQFKKLVPK 305

Query: 264  DHPYARQFEDNIMGSQAFRE 205
            +HPY     +N+  +  F E
Sbjct: 306  NHPYREYLVENMFATNFFSE 325


Top