BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022028
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PAR...   292   7e-77
emb|CBI39748.3| unnamed protein product [Vitis vinifera]              282   8e-74
ref|XP_002522771.1| conserved hypothetical protein [Ricinus comm...   280   4e-73
ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PAR...   263   4e-68
ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PAR...   259   9e-67

>ref|XP_002266069.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 734

 Score =  292 bits (748), Expect = 7e-77
 Identities = 158/295 (53%), Positives = 205/295 (69%), Gaps = 11/295 (3%)
 Frame = +1

Query: 1    VQVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYM 180
            VQVD+MRSSNWNSGAKHEAGYDAFMTGCVFAQA S+LGIDFK H  S+   +N+ LQK++
Sbjct: 442  VQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSNLGIDFKKHSSSANLAHNKNLQKHV 501

Query: 181  NHLYVSWRNGSIIDLCTGKIIPETSV-QKSKQRYPKVIFQNIVLLSGFSLNLKPAELKEC 357
            NHLY SW NG IIDL TG  I  T+V    K+RYPK++F NIV++ GF   L   +++EC
Sbjct: 502  NHLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPKILFSNIVIVWGFPSQLSSKKIREC 561

Query: 358  LCKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDG 537
            + K FG  S+++IY+LD+T  F+QFSK ELV+DFL LKE LE   D ++VLHPLS +L+G
Sbjct: 562  ISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKETLETIQDPISVLHPLSVLLEG 621

Query: 538  GNTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTK------EEKLRED---AESEGA 690
            GNT A  YETYK ICSS IS+V+FADQ KAV +K KTK      + K +ED   ++  GA
Sbjct: 622  GNTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSKENGA 681

Query: 691  ENYNSDSVTKNDTGQRSCETANDS-SQFQLSCVELMDTLCGPESQLGKQTRASKL 852
             +  SD   K+ T  R  E   D+ S  ++S  E++D+L   +++L K  R + L
Sbjct: 682  TDAASDPADKSKT--RKIEDVIDNLSDDRISGSEIIDSLYAAQTKLSKHIRTTNL 734


>emb|CBI39748.3| unnamed protein product [Vitis vinifera]
          Length = 715

 Score =  282 bits (722), Expect = 8e-74
 Identities = 139/238 (58%), Positives = 180/238 (75%), Gaps = 1/238 (0%)
 Frame = +1

Query: 1    VQVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYM 180
            VQVD+MRSSNWNSGAKHEAGYDAFMTGCVFAQA S+LGIDFK H  S+   +N+ LQK++
Sbjct: 442  VQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQACSNLGIDFKKHSSSANLAHNKNLQKHV 501

Query: 181  NHLYVSWRNGSIIDLCTGKIIPETSV-QKSKQRYPKVIFQNIVLLSGFSLNLKPAELKEC 357
            NHLY SW NG IIDL TG  I  T+V    K+RYPK++F NIV++ GF   L   +++EC
Sbjct: 502  NHLYFSWVNGDIIDLGTGNRIAATTVCYNLKRRYPKILFSNIVIVWGFPSQLSSKKIREC 561

Query: 358  LCKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDG 537
            + K FG  S+++IY+LD+T  F+QFSK ELV+DFL LKE LE   D ++VLHPLS +L+G
Sbjct: 562  ISKAFGPISVTTIYHLDETAVFVQFSKPELVADFLVLKETLETIQDPISVLHPLSVLLEG 621

Query: 538  GNTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDS 711
            GNT A  YETYK ICSS IS+V+FADQ KAV +K KTK  + +E  +++  E+++ ++
Sbjct: 622  GNTCAASYETYKEICSSPISKVMFADQAKAVGIKWKTKLIESKEKVKTQEDESFSKEN 679


>ref|XP_002522771.1| conserved hypothetical protein [Ricinus communis]
            gi|223538009|gb|EEF39622.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 699

 Score =  280 bits (716), Expect = 4e-73
 Identities = 146/283 (51%), Positives = 193/283 (68%), Gaps = 9/283 (3%)
 Frame = +1

Query: 1    VQVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYM 180
            VQVD+ RSSNW+SG KHEAGYDAFMTGCVFAQA +HLG+DFK    S    +NE+LQK +
Sbjct: 412  VQVDDTRSSNWSSGVKHEAGYDAFMTGCVFAQACNHLGVDFKLKSSSENLAHNEKLQKLI 471

Query: 181  NHLYVSWRNGSIIDLCTGKIIPET-SVQKSKQRYPKVIFQNIVLLSGFSLNLKPAELKEC 357
            N LY+SW N  IIDL TG  + E+      +++ P ++F+NIVL+  F   LK  E++EC
Sbjct: 472  NLLYISWINWDIIDLRTGNRVAESLGFNYLRKQRPNILFKNIVLIWRFPSRLKAGEIREC 531

Query: 358  LCKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDG 537
            +CK FGL+S++SIY++D+T  F+QFSK ELVS+FL LKE+L++ ND ++VLHPLSK+LDG
Sbjct: 532  ICKAFGLNSVTSIYHVDETAVFVQFSKAELVSEFLVLKESLDRSNDPISVLHPLSKLLDG 591

Query: 538  GNTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAES--------EGAE 693
            GNT A DYETYK ICSS IS+V FADQ  AV +  KTK  + + DAES        E A 
Sbjct: 592  GNTCAADYETYKEICSSPISKVRFADQAAAVGINWKTKLVESKIDAESQHQDSFYKEDAR 651

Query: 694  NYNSDSVTKNDTGQRSCETANDSSQFQLSCVELMDTLCGPESQ 822
               S S  K++ G  S    +D    + +C +++D+    E Q
Sbjct: 652  TTKSASTKKSNAGDHS--VIDDLLSGRSACDQVIDSFYAAEDQ 692


>ref|XP_003552994.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 714

 Score =  263 bits (673), Expect = 4e-68
 Identities = 131/259 (50%), Positives = 181/259 (69%)
 Frame = +1

Query: 1    VQVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYM 180
            V+VD+ RS +W+ G KHEAGYDAFMTGC+FAQ  S LGIDFK H  S     NE+LQKY+
Sbjct: 434  VEVDDSRSCSWSPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLHDSSKPLALNEKLQKYV 493

Query: 181  NHLYVSWRNGSIIDLCTGKIIPETSVQKSKQRYPKVIFQNIVLLSGFSLNLKPAELKECL 360
            N LY+SW +  IIDL TG  + ++S++   +RYPK++F+NIV++ GFS  LK  E++EC+
Sbjct: 494  NRLYLSWMHRDIIDLNTGNKVADSSLRSLTKRYPKIMFENIVIIWGFSSKLKANEIRECI 553

Query: 361  CKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDGG 540
             KVFG  S+ S+++LD T AF+QFSK ELVSDFL +K++LE+   A++VLHPLSK+L+GG
Sbjct: 554  SKVFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSGGAISVLHPLSKLLEGG 613

Query: 541  NTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDSVTK 720
            NT   +Y+TY+ IC SS+S  LFADQ +AV +K KTK  + +    S G E+ N      
Sbjct: 614  NTCGANYDTYREICGSSLSEGLFADQAEAVGIKWKTKLTEYK--VASRGKEHENPSVQDN 671

Query: 721  NDTGQRSCETANDSSQFQL 777
             +T  ++ E    ++  QL
Sbjct: 672  VNTVMKNVERTKPNTIDQL 690


>ref|XP_003530802.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 718

 Score =  259 bits (661), Expect = 9e-67
 Identities = 140/287 (48%), Positives = 189/287 (65%), Gaps = 12/287 (4%)
 Frame = +1

Query: 1    VQVDEMRSSNWNSGAKHEAGYDAFMTGCVFAQASSHLGIDFKHHIPSSGFTYNERLQKYM 180
            V+VD  RS +WN G KHEAGYDAFMTGC+FAQ  S LGIDFK    S+    NE+LQKY+
Sbjct: 435  VEVDGSRSCSWNPGGKHEAGYDAFMTGCIFAQLCSDLGIDFKLRDSSNQLALNEKLQKYV 494

Query: 181  NHLYVSWRNGSIIDLCTGKIIPETSVQKS-KQRYPKVIFQNIVLLSGFSLNLKPAELKEC 357
            N LY+SW +G IIDL TG  + ++S   S K+RYP ++F+NIV++ GF   LK  E++EC
Sbjct: 495  NRLYLSWIHGDIIDLNTGNKVADSSPSHSLKKRYPTILFENIVIIWGFPSKLKANEVREC 554

Query: 358  LCKVFGLDSISSIYYLDKTTAFIQFSKKELVSDFLSLKENLEKKNDAVAVLHPLSKILDG 537
            + K FG  S+ S+++LD T AF+QFSK ELVSDFL +K++LE+ + A++VLHPLSK+L+G
Sbjct: 555  ISKAFGPTSVVSVFHLDATAAFVQFSKTELVSDFLLVKDSLERSDGAISVLHPLSKLLEG 614

Query: 538  GNTHAIDYETYKVICSSSISRVLFADQVKAVNVKGKTKEEKLREDAESEGAENYNSDSVT 717
            GNT A +Y+TY  IC S +S  LFADQ K V +K KT   KL E   +   E + + S+ 
Sbjct: 615  GNTCAANYDTYNEICGSPLSEGLFADQAKKVGIKWKT---KLTECKVASRGEEHENPSLQ 671

Query: 718  KND--TGQRSCE---------TANDSSQFQLSCVELMDTLCGPESQL 825
             ND  T  ++ E           N SS+ Q+S  E+ D+    E+ L
Sbjct: 672  ANDVNTAMKNVEKTKPNTIDQLGNASSRGQVSTFEIEDSSRVAEANL 718