BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022024
         (782 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_002513996.1| pentatricopeptide repeat-containing protein,...    67   6e-09
ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2...    64   3e-08

>ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27460-like [Vitis vinifera]
          Length = 475

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = -3

Query: 753 KYVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVK 592
           +YV V+ +LG+A LPLYKSLLR+ +  Q+P  DILKMMEKD IE+D+E   LV+
Sbjct: 418 QYVKVIHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQ 471


>ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547082|gb|EEF48579.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 496

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 31/56 (55%), Positives = 41/56 (73%)
 Frame = -3

Query: 750 YVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVKCLN 583
           ++ V+  LG+ASLPLYK LLR+ +  Q+ A DILKMMEKD IE+D+E   LV+  N
Sbjct: 438 FIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQAFN 493


>ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -3

Query: 750 YVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLV 595
           Y+  +  LG+A+LPLYK  LR+++  Q+PA DILKMMEKD IE+D+E   LV
Sbjct: 456 YIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507