BLASTX nr result
ID: Coptis25_contig00022024
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022024 (782 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containi... 67 3e-09 ref|XP_002513996.1| pentatricopeptide repeat-containing protein,... 67 6e-09 ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|2... 64 3e-08 >ref|XP_002283946.1| PREDICTED: pentatricopeptide repeat-containing protein At5g27460-like [Vitis vinifera] Length = 475 Score = 67.4 bits (163), Expect = 3e-09 Identities = 32/54 (59%), Positives = 42/54 (77%) Frame = -3 Query: 753 KYVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVK 592 +YV V+ +LG+A LPLYKSLLR+ + Q+P DILKMMEKD IE+D+E LV+ Sbjct: 418 QYVKVIHQLGVAKLPLYKSLLRMHLLFQRPVFDILKMMEKDEIEMDDETSALVQ 471 >ref|XP_002513996.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223547082|gb|EEF48579.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 496 Score = 66.6 bits (161), Expect = 6e-09 Identities = 31/56 (55%), Positives = 41/56 (73%) Frame = -3 Query: 750 YVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLVKCLN 583 ++ V+ LG+ASLPLYK LLR+ + Q+ A DILKMMEKD IE+D+E LV+ N Sbjct: 438 FIQVIHHLGVASLPLYKVLLRMHLHAQRAAFDILKMMEKDKIELDDETSALVQAFN 493 >ref|XP_002307350.1| predicted protein [Populus trichocarpa] gi|222856799|gb|EEE94346.1| predicted protein [Populus trichocarpa] Length = 511 Score = 64.3 bits (155), Expect = 3e-08 Identities = 29/52 (55%), Positives = 39/52 (75%) Frame = -3 Query: 750 YVMVLRRLGIASLPLYKSLLRVFVQVQKPAPDILKMMEKDNIEIDEEVCVLV 595 Y+ + LG+A+LPLYK LR+++ Q+PA DILKMMEKD IE+D+E LV Sbjct: 456 YIKAVHGLGVATLPLYKLFLRMYLNAQRPAWDILKMMEKDRIELDDETSALV 507