BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022022
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carbox...   248   3e-64
gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/o...   247   6e-64
gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subun...   247   6e-64
dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ...   247   8e-64
sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carbox...   244   7e-63

>sp|Q40250.1|RBS_LACSA RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|217946|dbj|BAA03103.1|
           riburose-1,5-bisphosphate carboxylase/oxygenase small
           subunit precursor [Lactuca sativa]
          Length = 181

 Score =  248 bits (634), Expect = 3e-64
 Identities = 106/127 (83%), Positives = 121/127 (95%)
 Frame = -2

Query: 387 SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLSEASLAKEVDYLLRNKWVPCLEFELEHG 208
           SLPSNGGRVQCMKVWPP+GLKKYETLSYLPPLS+ +L+KE+DYL+RNKW+PCLEFELEHG
Sbjct: 47  SLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHG 106

Query: 207 FVYREHHSSPGYQDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQ 28
           FVYREHH SPGY DGRYW MWKLPMFGCTDS+QV+KE+ EC KEYP+A++R+IGFDN+RQ
Sbjct: 107 FVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQ 166

Query: 27  VQCISFI 7
           VQCISFI
Sbjct: 167 VQCISFI 173


>gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Lactuca sativa]
          Length = 181

 Score =  247 bits (631), Expect = 6e-64
 Identities = 107/127 (84%), Positives = 121/127 (95%)
 Frame = -2

Query: 387 SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLSEASLAKEVDYLLRNKWVPCLEFELEHG 208
           SLPSNGGRVQCMKVWPP+GLKKYETLSYLPPLS+ +L+KE+DYL+RNKWVPCLEFELEHG
Sbjct: 47  SLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEFELEHG 106

Query: 207 FVYREHHSSPGYQDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQ 28
           FVYREHH SPGY DGRYW MWKLPMFGCTDS+QV+KE+ EC KEYP+A++R+IGFD+VRQ
Sbjct: 107 FVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQ 166

Query: 27  VQCISFI 7
           VQCISFI
Sbjct: 167 VQCISFI 173


>gb|AAO25119.1| ribulose-1,5-bisphosphate carboxylase small subunit [Chrysanthemum
           x morifolium]
          Length = 179

 Score =  247 bits (631), Expect = 6e-64
 Identities = 112/129 (86%), Positives = 120/129 (93%)
 Frame = -2

Query: 387 SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLSEASLAKEVDYLLRNKWVPCLEFELEHG 208
           SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPL+E  LAKEV+YLLRNKWVPCLEFELEHG
Sbjct: 46  SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEFELEHG 105

Query: 207 FVYREHHSSPGYQDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQ 28
           F YRE++ SPGY DGRYW MWKLPMFGC D+SQVLKEL+EC KEYP ++VRIIGFDNVRQ
Sbjct: 106 FPYRENNRSPGYYDGRYWTMWKLPMFGCNDASQVLKELNECKKEYPQSWVRIIGFDNVRQ 165

Query: 27  VQCISFIAH 1
           VQCISFIAH
Sbjct: 166 VQCISFIAH 174


>dbj|BAE46384.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Panax ginseng]
          Length = 183

 Score =  247 bits (630), Expect = 8e-64
 Identities = 111/128 (86%), Positives = 120/128 (93%)
 Frame = -2

Query: 387 SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLSEASLAKEVDYLLRNKWVPCLEFELEHG 208
           SLPSNGGRVQCMKVWPPLGLKK+ETLSYLP L++  L+KEVDYLLR+ WVPCLEFELEHG
Sbjct: 48  SLPSNGGRVQCMKVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEFELEHG 107

Query: 207 FVYREHHSSPGYQDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQ 28
           FVYREHH SPGY DGRYW MWKLPMFGCTDSSQVLKE++EC KEYP+AY+RIIGFDNVRQ
Sbjct: 108 FVYREHHHSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQ 167

Query: 27  VQCISFIA 4
           VQCISFIA
Sbjct: 168 VQCISFIA 175


>sp|P07089.1|RBS_FLATR RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|18466|emb|CAA28711.1| unnamed protein
           product [Flaveria trinervia]
          Length = 173

 Score =  244 bits (622), Expect = 7e-63
 Identities = 110/128 (85%), Positives = 119/128 (92%)
 Frame = -2

Query: 387 SLPSNGGRVQCMKVWPPLGLKKYETLSYLPPLSEASLAKEVDYLLRNKWVPCLEFELEHG 208
           +LPSNGGRVQCMKVWPP+G KKYETLSYLP L+EA LAKEVDYLLRNKWVPCLEFELEHG
Sbjct: 40  TLPSNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHG 99

Query: 207 FVYREHHSSPGYQDGRYWVMWKLPMFGCTDSSQVLKELDECVKEYPSAYVRIIGFDNVRQ 28
           FVYRE+ SSPGY DGRYW MWKLPMFGCTDS+QV+KEL EC KEYP A++RIIGFDNVRQ
Sbjct: 100 FVYRENASSPGYYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQ 159

Query: 27  VQCISFIA 4
           VQC+SFIA
Sbjct: 160 VQCVSFIA 167