BLASTX nr result

ID: Coptis25_contig00022018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022018
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513918.1| Protein brittle-1, chloroplast precursor, pu...   416   e-114
ref|XP_002307382.1| predicted protein [Populus trichocarpa] gi|2...   406   e-111
ref|XP_002866643.1| mitochondrial substrate carrier family prote...   404   e-110
ref|NP_201302.1| Mitochondrial substrate carrier family protein ...   404   e-110
ref|XP_004143464.1| PREDICTED: mitochondrial substrate carrier f...   402   e-110

>ref|XP_002513918.1| Protein brittle-1, chloroplast precursor, putative [Ricinus communis]
            gi|223547004|gb|EEF48501.1| Protein brittle-1,
            chloroplast precursor, putative [Ricinus communis]
          Length = 440

 Score =  416 bits (1069), Expect = e-114
 Identities = 227/362 (62%), Positives = 264/362 (72%), Gaps = 10/362 (2%)
 Frame = +2

Query: 11   SIVNETHENPIFNTGGLFLESNSPCSFPSLILRRNSEFSSCS-IDLKKLVVFRGFKYKEK 187
            SI N T     F  GG+FL+     SF +LI    S   + S +   K  +F GF+ +EK
Sbjct: 25   SIPNST----AFTYGGIFLDPTISSSFVNLISSTTSSIKTTSLVSTTKHAIFTGFR-REK 79

Query: 188  GLRV-----ISHGFLSVSLSIKRGEELVQESNXXXXXXXXXXXXXXXXXXXXXXXS---- 340
               +     I+  FLSVSLS   G ELVQE+                             
Sbjct: 80   NNNINNKAAITGLFLSVSLS-NDGPELVQETKECLVQNKDAKSENDAALKGRRKRKVLVR 138

Query: 341  RRQGAMNTTKHLWSGAVAAMISRTCVAPLERLKLEYIVRGEQRNLFELVQSIATTQGLKG 520
             R+ AMNTTKHLW+GA+AAM+SRT VAPLERLKLEY+VRGEQ+++ EL+++IA TQGLKG
Sbjct: 139  GRRAAMNTTKHLWAGAIAAMVSRTFVAPLERLKLEYMVRGEQKHILELIKTIAATQGLKG 198

Query: 521  FWKGNFLNILRTAPFKAVNFCAYDTYRKQLLKMSRGEETTNFERFXXXXXXXXXXXXXCL 700
            FWKGN +NILRTAPFKAVNFCAYDTYRKQLL+ S  EETTNFERF             CL
Sbjct: 199  FWKGNLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAAAGITATILCL 258

Query: 701  PMDTIRTKIVAPGGESLGGVIGAFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDI 880
            P+DTIRTKIVAPGGE+LGGVIGAFR+MI+TEGFFSLYKGLVPSIISMAPSGAVFYGVYDI
Sbjct: 259  PLDTIRTKIVAPGGEALGGVIGAFRYMIRTEGFFSLYKGLVPSIISMAPSGAVFYGVYDI 318

Query: 881  LKSAYLHSPEGKKRIKHMSQHGKELNALDQLELGPVKTLLYGAIAGACAEATTYPFEVVR 1060
            LKSAYLHSPEG+KRI+++SQHG+ELNALD LELGP++TLLYGAI+GACAEA TYPFEVVR
Sbjct: 319  LKSAYLHSPEGRKRIENLSQHGQELNALDLLELGPIRTLLYGAISGACAEAATYPFEVVR 378

Query: 1061 RR 1066
            R+
Sbjct: 379  RQ 380


>ref|XP_002307382.1| predicted protein [Populus trichocarpa] gi|222856831|gb|EEE94378.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  406 bits (1044), Expect = e-111
 Identities = 195/238 (81%), Positives = 218/238 (91%)
 Frame = +2

Query: 353  AMNTTKHLWSGAVAAMISRTCVAPLERLKLEYIVRGEQRNLFELVQSIATTQGLKGFWKG 532
            AMNTTKHLW+GA+AAM+SRTCVAPLERLKLEYIVRGEQ+N+ EL+++IATTQGLKGFWKG
Sbjct: 38   AMNTTKHLWAGAIAAMVSRTCVAPLERLKLEYIVRGEQKNIVELIKTIATTQGLKGFWKG 97

Query: 533  NFLNILRTAPFKAVNFCAYDTYRKQLLKMSRGEETTNFERFXXXXXXXXXXXXXCLPMDT 712
            N +NILRTAPFKAVNFCAYDTYRKQLL+ S  EETTNFERF             CLP+DT
Sbjct: 98   NLVNILRTAPFKAVNFCAYDTYRKQLLRFSGNEETTNFERFIAGAGAGITATILCLPLDT 157

Query: 713  IRTKIVAPGGESLGGVIGAFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSA 892
            IRTKIVAPGGE+LGGVIGAFRHMIQTEGFFSLYKGLVPSI+S+APSGAVFYGVYDILKSA
Sbjct: 158  IRTKIVAPGGEALGGVIGAFRHMIQTEGFFSLYKGLVPSILSVAPSGAVFYGVYDILKSA 217

Query: 893  YLHSPEGKKRIKHMSQHGKELNALDQLELGPVKTLLYGAIAGACAEATTYPFEVVRRR 1066
            YLHSPEG+KR+++MS HG+ELNALDQLELGP++TL+YGAIAGACAE +TYPFEVVRRR
Sbjct: 218  YLHSPEGQKRLQYMSHHGQELNALDQLELGPIRTLVYGAIAGACAEFSTYPFEVVRRR 275


>ref|XP_002866643.1| mitochondrial substrate carrier family protein [Arabidopsis lyrata
            subsp. lyrata] gi|297312478|gb|EFH42902.1| mitochondrial
            substrate carrier family protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 426

 Score =  404 bits (1039), Expect = e-110
 Identities = 211/346 (60%), Positives = 249/346 (71%), Gaps = 8/346 (2%)
 Frame = +2

Query: 53   GGLFLESNSPCSFPSLILRRNSEFSSCSIDLKKLVVFRGFKYKEK-GLRVISHGFLSVSL 229
            GGLFL+ + P S  S +  ++   SSC    K     R  K++ + G R     FLSVSL
Sbjct: 25   GGLFLDDSVPSSSVSFLSSKDCSVSSCRFSQKS----RFLKFRRRNGTR--EPLFLSVSL 78

Query: 230  SIKRGEELVQESNXXXXXXXXXXXXXXXXXXXXXXXSRR-------QGAMNTTKHLWSGA 388
            SIK G    +E                         + +        GA+NTTKHLW+GA
Sbjct: 79   SIKEGNGEEEEGEGYNGQNGFKSEKGSVLIGGCQEATEKLMVKENGTGALNTTKHLWAGA 138

Query: 389  VAAMISRTCVAPLERLKLEYIVRGEQRNLFELVQSIATTQGLKGFWKGNFLNILRTAPFK 568
             AAM+SRTC+APLER+KLEYIVRGEQ NL EL+Q IAT +G++GFWKGN +NILRTAPFK
Sbjct: 139  FAAMVSRTCIAPLERMKLEYIVRGEQGNLLELIQRIATNEGIRGFWKGNLVNILRTAPFK 198

Query: 569  AVNFCAYDTYRKQLLKMSRGEETTNFERFXXXXXXXXXXXXXCLPMDTIRTKIVAPGGES 748
            ++NF AYDTYR QLLK+S  EETTNFERF             CLP+DTIRT +VAPGGE+
Sbjct: 199  SINFYAYDTYRGQLLKLSGNEETTNFERFVAGAAAGVTASLLCLPLDTIRTVMVAPGGEA 258

Query: 749  LGGVIGAFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGKKRIK 928
            LGGV+GAFRHMIQTEGFFSLYKGLVPS++SMAPSGAVFYGVYDILKSAYLH+PEGKKR++
Sbjct: 259  LGGVVGAFRHMIQTEGFFSLYKGLVPSLVSMAPSGAVFYGVYDILKSAYLHTPEGKKRLE 318

Query: 929  HMSQHGKELNALDQLELGPVKTLLYGAIAGACAEATTYPFEVVRRR 1066
            HM Q G++LNA DQLELGP++TLLYGAIAGAC+EA TYPFEVVRRR
Sbjct: 319  HMKQEGEDLNAFDQLELGPMRTLLYGAIAGACSEAATYPFEVVRRR 364


>ref|NP_201302.1| Mitochondrial substrate carrier family protein [Arabidopsis thaliana]
            gi|75311621|sp|Q9LV81.1|BRTL3_ARATH RecName:
            Full=Probable mitochondrial adenine nucleotide
            transporter BTL3; AltName: Full=Adenine nucleotide
            transporter BT1-like protein 3 gi|8843761|dbj|BAA97309.1|
            mitochondrial carrier protein-like [Arabidopsis thaliana]
            gi|30793972|gb|AAP40437.1| putative mitochondrial carrier
            protein [Arabidopsis thaliana] gi|53749186|gb|AAU90078.1|
            At5g64970 [Arabidopsis thaliana]
            gi|110737070|dbj|BAF00488.1| mitochondrial carrier
            protein-like [Arabidopsis thaliana]
            gi|332010594|gb|AED97977.1| Mitochondrial substrate
            carrier family protein [Arabidopsis thaliana]
          Length = 428

 Score =  404 bits (1037), Expect = e-110
 Identities = 215/345 (62%), Positives = 248/345 (71%), Gaps = 7/345 (2%)
 Frame = +2

Query: 53   GGLFLESNSPCSFPSLILRRNSEFSSCSIDLKKLVVFRGFKYKEKGLRVISHGFLSVSLS 232
            GGLFLE + P S  S +  ++   +SC    K    F  F+ +  G R     FLSVSLS
Sbjct: 26   GGLFLEESLPSSSVSFLSSKDCSVNSCRFSQKSS--FLKFR-RRNGTR--EPLFLSVSLS 80

Query: 233  IKR--GEELVQESNXXXXXXXXXXXXXXXXXXXXXXXSRR-----QGAMNTTKHLWSGAV 391
            I    GEE   E                          RR      GA+NTTKHLW+GA 
Sbjct: 81   INESNGEEEEGEGYNGQNGFKSEKGSVLIGGGQESKEKRRVKENGAGALNTTKHLWAGAF 140

Query: 392  AAMISRTCVAPLERLKLEYIVRGEQRNLFELVQSIATTQGLKGFWKGNFLNILRTAPFKA 571
            AAM+SRTC+APLER+KLEYIVRGEQ NL EL+Q IAT +G++GFWKGN +NILRTAPFK+
Sbjct: 141  AAMVSRTCIAPLERMKLEYIVRGEQGNLLELIQRIATNEGIRGFWKGNLVNILRTAPFKS 200

Query: 572  VNFCAYDTYRKQLLKMSRGEETTNFERFXXXXXXXXXXXXXCLPMDTIRTKIVAPGGESL 751
            +NF AYDTYR QLLK+S  EETTNFERF             CLP+DTIRT +VAPGGE+L
Sbjct: 201  INFYAYDTYRGQLLKLSGNEETTNFERFVAGAAAGVTASLLCLPLDTIRTVMVAPGGEAL 260

Query: 752  GGVIGAFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAYLHSPEGKKRIKH 931
            GGV+GAFRHMIQTEGFFSLYKGLVPS++SMAPSGAVFYGVYDILKSAYLH+PEGKKR++H
Sbjct: 261  GGVVGAFRHMIQTEGFFSLYKGLVPSLVSMAPSGAVFYGVYDILKSAYLHTPEGKKRLEH 320

Query: 932  MSQHGKELNALDQLELGPVKTLLYGAIAGACAEATTYPFEVVRRR 1066
            M Q G+ELNA DQLELGP++TLLYGAIAGAC+EA TYPFEVVRRR
Sbjct: 321  MKQEGEELNAFDQLELGPMRTLLYGAIAGACSEAATYPFEVVRRR 365


>ref|XP_004143464.1| PREDICTED: mitochondrial substrate carrier family protein B-like
            [Cucumis sativus]
          Length = 439

 Score =  402 bits (1034), Expect = e-110
 Identities = 221/357 (61%), Positives = 255/357 (71%), Gaps = 19/357 (5%)
 Frame = +2

Query: 53   GGLFLESNSPCSFPSLILRRNSEFS-----SCSIDLKKLVVFRGFKYKEKGLRVISHG-- 211
            GGLFL+ N P SF SLI  + S  S     SCS    K +    F+   +G R +S G  
Sbjct: 24   GGLFLDDNLPPSFVSLISSKTSSGSASFSPSCSHSRHKTL---NFQILGRGRRRVSDGGG 80

Query: 212  --FLSVSLS----------IKRGEELVQESNXXXXXXXXXXXXXXXXXXXXXXXSRRQGA 355
              FLSVSLS          I+  E+ + ++                         R  GA
Sbjct: 81   CGFLSVSLSANGSGENGDYIQDSEDYLGQNGNKGSMEKAIHHEEEEEEREEKAVLRGSGA 140

Query: 356  MNTTKHLWSGAVAAMISRTCVAPLERLKLEYIVRGEQRNLFELVQSIATTQGLKGFWKGN 535
            MN TKHLW+GAVAAM+SRT VAPLERLKLEYIVRGEQ+NL EL+++IA++QGL GFWKGN
Sbjct: 141  MNMTKHLWAGAVAAMVSRTFVAPLERLKLEYIVRGEQKNLIELIKTIASSQGLNGFWKGN 200

Query: 536  FLNILRTAPFKAVNFCAYDTYRKQLLKMSRGEETTNFERFXXXXXXXXXXXXXCLPMDTI 715
            F+NILRTAPFKA+NF AYDTYR QLL+ S  EETTNFERF             C+PMDTI
Sbjct: 201  FVNILRTAPFKAINFYAYDTYRNQLLRWSGNEETTNFERFIAGAAAGITATVLCIPMDTI 260

Query: 716  RTKIVAPGGESLGGVIGAFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAY 895
            RTK+VAPGGE+LGGVIG FRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAY
Sbjct: 261  RTKMVAPGGEALGGVIGTFRHMIQTEGFFSLYKGLVPSIISMAPSGAVFYGVYDILKSAY 320

Query: 896  LHSPEGKKRIKHMSQHGKELNALDQLELGPVKTLLYGAIAGACAEATTYPFEVVRRR 1066
            LHSPEG+KRI++M + G+ELNAL+QLELG ++TLLYGAIAGA AEA TYPFEVVRR+
Sbjct: 321  LHSPEGRKRIQNMKEGGQELNALEQLELGTIRTLLYGAIAGAFAEAATYPFEVVRRQ 377


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