BLASTX nr result

ID: Coptis25_contig00022010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022010
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148603.1| PREDICTED: uncharacterized protein LOC101209...    76   3e-12
ref|XP_003595874.1| Seed maturation protein PM41 [Medicago trunc...    73   3e-11
ref|XP_002315095.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002532797.1| conserved hypothetical protein [Ricinus comm...    71   1e-10
ref|NP_565518.1| uncharacterized protein [Arabidopsis thaliana] ...    70   2e-10

>ref|XP_004148603.1| PREDICTED: uncharacterized protein LOC101209719 [Cucumis sativus]
           gi|449513239|ref|XP_004164271.1| PREDICTED:
           uncharacterized protein LOC101223335 [Cucumis sativus]
          Length = 78

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 35/38 (92%), Positives = 37/38 (97%)
 Frame = -3

Query: 216 IQIDKIEDKVEDAAGKGGPVFGAGKDENKQDLGVTGTG 103
           IQIDKI+DKVEDAAGKGGPVFGAGKD+ KQDLGVTGTG
Sbjct: 41  IQIDKIQDKVEDAAGKGGPVFGAGKDDKKQDLGVTGTG 78


>ref|XP_003595874.1| Seed maturation protein PM41 [Medicago truncatula]
           gi|124360189|gb|ABN08202.1| hypothetical protein
           MtrDRAFT_AC155884g16v2 [Medicago truncatula]
           gi|355484922|gb|AES66125.1| Seed maturation protein PM41
           [Medicago truncatula]
          Length = 80

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 32/38 (84%), Positives = 36/38 (94%)
 Frame = -3

Query: 216 IQIDKIEDKVEDAAGKGGPVFGAGKDENKQDLGVTGTG 103
           IQ+DK+++KV D AGKGGPVFGAGKDENKQDLGVTGTG
Sbjct: 41  IQVDKLQEKVHDPAGKGGPVFGAGKDENKQDLGVTGTG 78


>ref|XP_002315095.1| predicted protein [Populus trichocarpa] gi|222864135|gb|EEF01266.1|
           predicted protein [Populus trichocarpa]
          Length = 79

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 31/38 (81%), Positives = 37/38 (97%)
 Frame = -3

Query: 216 IQIDKIEDKVEDAAGKGGPVFGAGKDENKQDLGVTGTG 103
           IQ+DK+++KV DAAG+GGPVFGAGKDENK+DLGVTGTG
Sbjct: 41  IQVDKLQEKVPDAAGEGGPVFGAGKDENKKDLGVTGTG 78


>ref|XP_002532797.1| conserved hypothetical protein [Ricinus communis]
           gi|223527457|gb|EEF29590.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 80

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/38 (86%), Positives = 36/38 (94%)
 Frame = -3

Query: 216 IQIDKIEDKVEDAAGKGGPVFGAGKDENKQDLGVTGTG 103
           IQIDK +DKV DAAGKGGPVFGAGKDE+K+DLGVTGTG
Sbjct: 41  IQIDKEQDKVADAAGKGGPVFGAGKDEDKKDLGVTGTG 78


>ref|NP_565518.1| uncharacterized protein [Arabidopsis thaliana]
           gi|11692848|gb|AAG40027.1|AF324676_1 At2g21820
           [Arabidopsis thaliana]
           gi|12642934|gb|AAK00409.1|AF339727_1 unknown protein
           [Arabidopsis thaliana] gi|4417276|gb|AAD20401.1|
           expressed protein [Arabidopsis thaliana]
           gi|330252132|gb|AEC07226.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 78

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 31/38 (81%), Positives = 35/38 (92%)
 Frame = -3

Query: 216 IQIDKIEDKVEDAAGKGGPVFGAGKDENKQDLGVTGTG 103
           IQ+DK++DKV DAAG GGPVFGAGKD+ KQDLGVTGTG
Sbjct: 41  IQVDKLQDKVSDAAGLGGPVFGAGKDDKKQDLGVTGTG 78


Top