BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021992
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38862.3| unnamed protein product [Vitis vinifera]              294   9e-78
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi...   294   9e-78
ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2...   261   6e-68
gb|AFK47264.1| unknown [Lotus japonicus]                              249   2e-64
ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ...   249   3e-64

>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  294 bits (753), Expect = 9e-78
 Identities = 146/205 (71%), Positives = 175/205 (85%)
 Frame = -3

Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436
           WI+IGPNI+EAQ+  ISQ+  KM+KR KA +KQIICF   E++   LS +L +WVKIMKP
Sbjct: 11  WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKP 67

Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256
           RRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL
Sbjct: 68  RRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTL 127

Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76
            AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RA
Sbjct: 128 SAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRA 187

Query: 75  GMPDRGEILLGEMEAQEIYAGKEVY 1
           GMPD+GEIL+ EMEA+EIYAG+EVY
Sbjct: 188 GMPDQGEILVKEMEAKEIYAGREVY 212


>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g01970-like [Vitis vinifera]
          Length = 352

 Score =  294 bits (753), Expect = 9e-78
 Identities = 146/205 (71%), Positives = 175/205 (85%)
 Frame = -3

Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436
           WI+IGPNI+EAQ+  ISQ+  KM+KR KA +KQIICF   E++   LS +L +WVKIMKP
Sbjct: 11  WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKP 67

Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256
           RRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL
Sbjct: 68  RRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTL 127

Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76
            AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RA
Sbjct: 128 SAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRA 187

Query: 75  GMPDRGEILLGEMEAQEIYAGKEVY 1
           GMPD+GEIL+ EMEA+EIYAG+EVY
Sbjct: 188 GMPDQGEILVKEMEAKEIYAGREVY 212


>ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  261 bits (668), Expect = 6e-68
 Identities = 131/205 (63%), Positives = 166/205 (80%)
 Frame = -3

Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436
           W++IGPNI E Q++AISQLP KM+KR KA M+QIICF+  +K G +L  +L +WVKIMKP
Sbjct: 75  WVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFN--DKKG-SLRGLLSAWVKIMKP 131

Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256
           RR DWL +LKE++K+E PL  EV E ALLE+SFEAN+RDYTK+I  Y   N+L +AE T 
Sbjct: 132 RRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGMNNQLEEAERTR 191

Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76
            AM++RGF  DQ+TLT +I+MYSK G+L  AEE FEELKLLG PLD+R+YG+MIMAY+RA
Sbjct: 192 LAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRSYGSMIMAYIRA 251

Query: 75  GMPDRGEILLGEMEAQEIYAGKEVY 1
           GMP++GE++L EM+AQEI AG EVY
Sbjct: 252 GMPEKGEMILREMDAQEIRAGSEVY 276


>gb|AFK47264.1| unknown [Lotus japonicus]
          Length = 414

 Score =  249 bits (637), Expect = 2e-64
 Identities = 125/205 (60%), Positives = 159/205 (77%)
 Frame = -3

Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436
           W +IG NI+  Q +AIS+LP KM+KR KA M+QIICF   + N   +S +L +WVKIMKP
Sbjct: 78  WTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGN---VSDLLNAWVKIMKP 134

Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256
            RA+WL VLKE+  +E PL  EV E+ALLE+SFE NIRDYT +I    K N+L +AE  L
Sbjct: 135 IRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENIL 194

Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76
            AMK+RGF CDQ+ LT ++++YSKAG L++AEE FEE++LLG PLDKR+YG+MI AY+RA
Sbjct: 195 TAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254

Query: 75  GMPDRGEILLGEMEAQEIYAGKEVY 1
           GMP+RGE LL EM+A+EIYAG EVY
Sbjct: 255 GMPERGESLLEEMDAREIYAGSEVY 279


>ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498738|gb|AES79941.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  249 bits (636), Expect = 3e-64
 Identities = 125/205 (60%), Positives = 163/205 (79%)
 Frame = -3

Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436
           W +I  +I+E Q++AI++LP +M KR KA M+QIICF  SE+ G  L  +LR+WV+IMKP
Sbjct: 88  WNEIRNDITEEQKQAIAKLPFRMEKRCKAVMRQIICF--SEEKG-RLCDVLRAWVEIMKP 144

Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256
            RADWL VLKE+  ++ PL  EV E+AL+E+SFE N+RDYTKLI  Y+K+N+L  AE   
Sbjct: 145 TRADWLSVLKELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIF 204

Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76
             MK+RGF CDQ+ LT +++MYSKAG L++AEE FEE+KLLG PLDKR+YG+MIMAY+RA
Sbjct: 205 TLMKQRGFICDQVILTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRA 264

Query: 75  GMPDRGEILLGEMEAQEIYAGKEVY 1
           GMP++GE LL EM+AQ+IYAG EVY
Sbjct: 265 GMPEKGESLLEEMDAQDIYAGSEVY 289