BLASTX nr result
ID: Coptis25_contig00021992
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021992 (653 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38862.3| unnamed protein product [Vitis vinifera] 294 9e-78 ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi... 294 9e-78 ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|2... 261 6e-68 gb|AFK47264.1| unknown [Lotus japonicus] 249 2e-64 ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ... 249 3e-64 >emb|CBI38862.3| unnamed protein product [Vitis vinifera] Length = 353 Score = 294 bits (753), Expect = 9e-78 Identities = 146/205 (71%), Positives = 175/205 (85%) Frame = -3 Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436 WI+IGPNI+EAQ+ ISQ+ KM+KR KA +KQIICF E++ LS +L +WVKIMKP Sbjct: 11 WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKP 67 Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256 RRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL Sbjct: 68 RRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTL 127 Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76 AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RA Sbjct: 128 SAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRA 187 Query: 75 GMPDRGEILLGEMEAQEIYAGKEVY 1 GMPD+GEIL+ EMEA+EIYAG+EVY Sbjct: 188 GMPDQGEILVKEMEAKEIYAGREVY 212 >ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein At1g01970-like [Vitis vinifera] Length = 352 Score = 294 bits (753), Expect = 9e-78 Identities = 146/205 (71%), Positives = 175/205 (85%) Frame = -3 Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436 WI+IGPNI+EAQ+ ISQ+ KM+KR KA +KQIICF E++ LS +L +WVKIMKP Sbjct: 11 WIEIGPNITEAQKMTISQISLKMTKRCKALVKQIICFSPEERS---LSDLLAAWVKIMKP 67 Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256 RRADWL VLKE+ +L+ PL+ EV E ALLE+SFEANIRDYTK+IDGY KQNRL DAE TL Sbjct: 68 RRADWLSVLKELGRLDHPLLLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTL 127 Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76 AMK+RGF CDQ+TLT +INMYSKAG+LE AE+ FEE+KLLG PLDKR+YG+MIMAY+RA Sbjct: 128 SAMKRRGFICDQVTLTAMINMYSKAGNLELAEKTFEEIKLLGHPLDKRSYGSMIMAYIRA 187 Query: 75 GMPDRGEILLGEMEAQEIYAGKEVY 1 GMPD+GEIL+ EMEA+EIYAG+EVY Sbjct: 188 GMPDQGEILVKEMEAKEIYAGREVY 212 >ref|XP_002320730.1| predicted protein [Populus trichocarpa] gi|222861503|gb|EEE99045.1| predicted protein [Populus trichocarpa] Length = 407 Score = 261 bits (668), Expect = 6e-68 Identities = 131/205 (63%), Positives = 166/205 (80%) Frame = -3 Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436 W++IGPNI E Q++AISQLP KM+KR KA M+QIICF+ +K G +L +L +WVKIMKP Sbjct: 75 WVEIGPNIPEEQKQAISQLPFKMTKRCKALMRQIICFN--DKKG-SLRGLLSAWVKIMKP 131 Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256 RR DWL +LKE++K+E PL EV E ALLE+SFEAN+RDYTK+I Y N+L +AE T Sbjct: 132 RRKDWLSILKELNKMEHPLYLEVVEIALLEESFEANVRDYTKIIHFYGMNNQLEEAERTR 191 Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76 AM++RGF DQ+TLT +I+MYSK G+L AEE FEELKLLG PLD+R+YG+MIMAY+RA Sbjct: 192 LAMEERGFVSDQVTLTAMIHMYSKGGNLTLAEETFEELKLLGQPLDRRSYGSMIMAYIRA 251 Query: 75 GMPDRGEILLGEMEAQEIYAGKEVY 1 GMP++GE++L EM+AQEI AG EVY Sbjct: 252 GMPEKGEMILREMDAQEIRAGSEVY 276 >gb|AFK47264.1| unknown [Lotus japonicus] Length = 414 Score = 249 bits (637), Expect = 2e-64 Identities = 125/205 (60%), Positives = 159/205 (77%) Frame = -3 Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436 W +IG NI+ Q +AIS+LP KM+KR KA M+QIICF + N +S +L +WVKIMKP Sbjct: 78 WTEIGHNITHEQNEAISKLPFKMTKRCKALMRQIICFSAEKGN---VSDLLNAWVKIMKP 134 Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256 RA+WL VLKE+ +E PL EV E+ALLE+SFE NIRDYT +I K N+L +AE L Sbjct: 135 IRAEWLSVLKELETMEHPLYLEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENIL 194 Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76 AMK+RGF CDQ+ LT ++++YSKAG L++AEE FEE++LLG PLDKR+YG+MI AY+RA Sbjct: 195 TAMKQRGFICDQVILTTMVHIYSKAGHLDRAEEYFEEIRLLGEPLDKRSYGSMITAYIRA 254 Query: 75 GMPDRGEILLGEMEAQEIYAGKEVY 1 GMP+RGE LL EM+A+EIYAG EVY Sbjct: 255 GMPERGESLLEEMDAREIYAGSEVY 279 >ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] gi|355498738|gb|AES79941.1| Pentatricopeptide repeat-containing protein [Medicago truncatula] Length = 426 Score = 249 bits (636), Expect = 3e-64 Identities = 125/205 (60%), Positives = 163/205 (79%) Frame = -3 Query: 615 WIKIGPNISEAQEKAISQLPPKMSKRDKAFMKQIICFDYSEKNGVTLSSILRSWVKIMKP 436 W +I +I+E Q++AI++LP +M KR KA M+QIICF SE+ G L +LR+WV+IMKP Sbjct: 88 WNEIRNDITEEQKQAIAKLPFRMEKRCKAVMRQIICF--SEEKG-RLCDVLRAWVEIMKP 144 Query: 435 RRADWLLVLKEMSKLEVPLVSEVTEYALLEDSFEANIRDYTKLIDGYAKQNRLHDAEITL 256 RADWL VLKE+ ++ PL EV E+AL+E+SFE N+RDYTKLI Y+K+N+L AE Sbjct: 145 TRADWLSVLKELKNMDHPLYLEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIF 204 Query: 255 QAMKKRGFTCDQITLTVLINMYSKAGSLEQAEEIFEELKLLGLPLDKRAYGAMIMAYVRA 76 MK+RGF CDQ+ LT +++MYSKAG L++AEE FEE+KLLG PLDKR+YG+MIMAY+RA Sbjct: 205 TLMKQRGFICDQVILTTMVHMYSKAGHLDRAEEYFEEIKLLGEPLDKRSYGSMIMAYIRA 264 Query: 75 GMPDRGEILLGEMEAQEIYAGKEVY 1 GMP++GE LL EM+AQ+IYAG EVY Sbjct: 265 GMPEKGESLLEEMDAQDIYAGSEVY 289