BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021989
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526497.1| ring finger protein, putative [Ricinus commu...   126   2e-27
ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   117   1e-24
ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-...   115   5e-24
ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab...   114   6e-24
gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi...   114   8e-24

>ref|XP_002526497.1| ring finger protein, putative [Ricinus communis]
           gi|223534172|gb|EEF35888.1| ring finger protein,
           putative [Ricinus communis]
          Length = 354

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/104 (55%), Positives = 73/104 (70%)
 Frame = +3

Query: 6   SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185
           SS DCAVCLSKFEP DQLRLLPLCCHAFH+ CIDTWL SN TCPLCRS IH  +S+  K 
Sbjct: 115 SSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTCPLCRSPIHASDSDLLKS 174

Query: 186 LFQETSSNNSSFRVQMGNVXXXXXXXXXXXXXXIGSFEYLLDDD 317
           L  + ++   SFR+++G++              +GSFEY++D+D
Sbjct: 175 LSPD-AAPPESFRLEIGSISRRQTASEPRSSYSVGSFEYVVDED 217


>ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera]
          Length = 342

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 3/107 (2%)
 Frame = +3

Query: 6   SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185
           S  DCAVCLSKFEPHDQLRLLP+CCHAFH  CIDTWL SN TCPLCRS I   E++  K 
Sbjct: 119 SEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADFMKA 178

Query: 186 LFQETSSNNSSFRVQMGNV---XXXXXXXXXXXXXXIGSFEYLLDDD 317
           +   T++ + SFR+++G+V                 +GSF+Y++D +
Sbjct: 179 ILASTNAGD-SFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHE 224


>ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max]
          Length = 359

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 10/113 (8%)
 Frame = +3

Query: 9   SADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKKL 188
           S DCAVCLSKF  HD LRLLPLCCHAFH  CIDTWLQSN +CPLCRSTI   +S+  K L
Sbjct: 136 SGDCAVCLSKFHHHDLLRLLPLCCHAFHAECIDTWLQSNLSCPLCRSTIVADDSDLAKIL 195

Query: 189 FQETSSNNS-SFRVQMGNV---------XXXXXXXXXXXXXXIGSFEYLLDDD 317
              +S+ +S SFR+++GN+                       IGSFEYL+DD+
Sbjct: 196 RPPSSAGSSDSFRLELGNISRRGTDGAAEGGSVARGGSRSYSIGSFEYLIDDE 248


>ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp.
           lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein
           ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 4/109 (3%)
 Frame = +3

Query: 6   SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185
           +S DCAVCLSKFEP +QLRLLPLCCHAFH  CID WL SN TCPLCRS +   ES+  K 
Sbjct: 114 NSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKS 173

Query: 186 LFQETSSNN---SSFRVQMGNV-XXXXXXXXXXXXXXIGSFEYLLDDDD 320
           L    +++N   +SFR+++G++               IGSF+Y++DD D
Sbjct: 174 LVGGNNNSNGGENSFRLEIGSISRRQTESVEQHRSYSIGSFDYIVDDVD 222


>gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana]
          Length = 273

 Score =  114 bits (285), Expect = 8e-24
 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 8/113 (7%)
 Frame = +3

Query: 6   SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185
           +S DCAVCLSKFEP DQLRLLPLCCHAFH  CID WL SN TCPLCRS +   ES+  K 
Sbjct: 52  NSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKS 111

Query: 186 LFQETSSN---NSSFRVQMGNV-----XXXXXXXXXXXXXXIGSFEYLLDDDD 320
           L    S+N    +SFR+++G++                   IGSF+Y++DD D
Sbjct: 112 LAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSIGSFDYIVDDVD 164