BLASTX nr result
ID: Coptis25_contig00021989
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021989 (420 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526497.1| ring finger protein, putative [Ricinus commu... 126 2e-27 ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 117 1e-24 ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 115 5e-24 ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arab... 114 6e-24 gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsi... 114 8e-24 >ref|XP_002526497.1| ring finger protein, putative [Ricinus communis] gi|223534172|gb|EEF35888.1| ring finger protein, putative [Ricinus communis] Length = 354 Score = 126 bits (317), Expect = 2e-27 Identities = 58/104 (55%), Positives = 73/104 (70%) Frame = +3 Query: 6 SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185 SS DCAVCLSKFEP DQLRLLPLCCHAFH+ CIDTWL SN TCPLCRS IH +S+ K Sbjct: 115 SSGDCAVCLSKFEPQDQLRLLPLCCHAFHIHCIDTWLHSNQTCPLCRSPIHASDSDLLKS 174 Query: 186 LFQETSSNNSSFRVQMGNVXXXXXXXXXXXXXXIGSFEYLLDDD 317 L + ++ SFR+++G++ +GSFEY++D+D Sbjct: 175 LSPD-AAPPESFRLEIGSISRRQTASEPRSSYSVGSFEYVVDED 217 >ref|XP_002269069.2| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Vitis vinifera] Length = 342 Score = 117 bits (293), Expect = 1e-24 Identities = 55/107 (51%), Positives = 71/107 (66%), Gaps = 3/107 (2%) Frame = +3 Query: 6 SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185 S DCAVCLSKFEPHDQLRLLP+CCHAFH CIDTWL SN TCPLCRS I E++ K Sbjct: 119 SEGDCAVCLSKFEPHDQLRLLPICCHAFHARCIDTWLASNQTCPLCRSPIFATEADFMKA 178 Query: 186 LFQETSSNNSSFRVQMGNV---XXXXXXXXXXXXXXIGSFEYLLDDD 317 + T++ + SFR+++G+V +GSF+Y++D + Sbjct: 179 ILASTNAGD-SFRIELGSVSRRRSASESGEARRSYSVGSFDYIVDHE 224 >ref|XP_003530107.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Glycine max] Length = 359 Score = 115 bits (287), Expect = 5e-24 Identities = 60/113 (53%), Positives = 72/113 (63%), Gaps = 10/113 (8%) Frame = +3 Query: 9 SADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKKL 188 S DCAVCLSKF HD LRLLPLCCHAFH CIDTWLQSN +CPLCRSTI +S+ K L Sbjct: 136 SGDCAVCLSKFHHHDLLRLLPLCCHAFHAECIDTWLQSNLSCPLCRSTIVADDSDLAKIL 195 Query: 189 FQETSSNNS-SFRVQMGNV---------XXXXXXXXXXXXXXIGSFEYLLDDD 317 +S+ +S SFR+++GN+ IGSFEYL+DD+ Sbjct: 196 RPPSSAGSSDSFRLELGNISRRGTDGAAEGGSVARGGSRSYSIGSFEYLIDDE 248 >ref|XP_002878324.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata] gi|297324162|gb|EFH54583.1| hypothetical protein ARALYDRAFT_486491 [Arabidopsis lyrata subsp. lyrata] Length = 334 Score = 114 bits (286), Expect = 6e-24 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 4/109 (3%) Frame = +3 Query: 6 SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185 +S DCAVCLSKFEP +QLRLLPLCCHAFH CID WL SN TCPLCRS + ES+ K Sbjct: 114 NSGDCAVCLSKFEPEEQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKS 173 Query: 186 LFQETSSNN---SSFRVQMGNV-XXXXXXXXXXXXXXIGSFEYLLDDDD 320 L +++N +SFR+++G++ IGSF+Y++DD D Sbjct: 174 LVGGNNNSNGGENSFRLEIGSISRRQTESVEQHRSYSIGSFDYIVDDVD 222 >gb|AAC69858.1| RING-H2 finger protein RHX1a, partial [Arabidopsis thaliana] Length = 273 Score = 114 bits (285), Expect = 8e-24 Identities = 58/113 (51%), Positives = 71/113 (62%), Gaps = 8/113 (7%) Frame = +3 Query: 6 SSADCAVCLSKFEPHDQLRLLPLCCHAFHLTCIDTWLQSNHTCPLCRSTIHLQESEQYKK 185 +S DCAVCLSKFEP DQLRLLPLCCHAFH CID WL SN TCPLCRS + ES+ K Sbjct: 52 NSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESDLMKS 111 Query: 186 LFQETSSN---NSSFRVQMGNV-----XXXXXXXXXXXXXXIGSFEYLLDDDD 320 L S+N +SFR+++G++ IGSF+Y++DD D Sbjct: 112 LAVVGSNNGGGENSFRLEIGSISRRRQTPIPESVEQHRTYSIGSFDYIVDDVD 164