BLASTX nr result

ID: Coptis25_contig00021986 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021986
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32505.3| unnamed protein product [Vitis vinifera]              191   5e-47
ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein ...   191   6e-47
ref|XP_002522369.1| conserved hypothetical protein [Ricinus comm...   189   2e-46
ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|2...   182   3e-44
gb|ABR16110.1| unknown [Picea sitchensis]                             125   3e-27

>emb|CBI32505.3| unnamed protein product [Vitis vinifera]
          Length = 1019

 Score =  191 bits (486), Expect = 5e-47
 Identities = 94/155 (60%), Positives = 114/155 (73%)
 Frame = +1

Query: 1   VNIGIPAYTFVQCFLRSIRSGSIGFLMRDNVEVTNLNRPEGRVFDWLYDPMCVMKEQIKX 180
           +NIGIPAY+F++CFL SI+SGS GFLMRDNVE+T+LNRPEGRVFDW+++PM +MKEQ+K 
Sbjct: 356 INIGIPAYSFLECFLHSIKSGSPGFLMRDNVELTSLNRPEGRVFDWMFEPMSIMKEQLKR 415

Query: 181 XXXXXXXXXXXCKLSLYSADAQRVEAWQNGGVPPNDEIRRAQLEAISRRLQAFCLTLSRL 360
                       K SLY  D +R+EAWQNGG PP DEIRRAQLE ISRRLQ FCLTLSRL
Sbjct: 416 LNLVETEELYLYKFSLYHGDRERMEAWQNGGFPPEDEIRRAQLEGISRRLQGFCLTLSRL 475

Query: 361 PTFRRRYIEVVKALVEEAQKQWRELDDRGSIDAAL 465
           PT RR +  VVK + +EA++     D    + A L
Sbjct: 476 PTSRRWFDGVVKEIEQEARRGLDGFDALDDLTAVL 510


>ref|XP_002281443.1| PREDICTED: uncharacterized membrane protein At3g27390-like [Vitis
           vinifera]
          Length = 547

 Score =  191 bits (485), Expect = 6e-47
 Identities = 95/152 (62%), Positives = 115/152 (75%)
 Frame = +1

Query: 1   VNIGIPAYTFVQCFLRSIRSGSIGFLMRDNVEVTNLNRPEGRVFDWLYDPMCVMKEQIKX 180
           +NIGIPAY+F++CFL SI+SGS GFLMRDNVE+T+LNRPEGRVFDW+++PM +MKEQ+K 
Sbjct: 393 INIGIPAYSFLECFLHSIKSGSPGFLMRDNVELTSLNRPEGRVFDWMFEPMSIMKEQLKR 452

Query: 181 XXXXXXXXXXXCKLSLYSADAQRVEAWQNGGVPPNDEIRRAQLEAISRRLQAFCLTLSRL 360
                       K SLY  D +R+EAWQNGG PP DEIRRAQLE ISRRLQ FCLTLSRL
Sbjct: 453 LNLVETEELYLYKFSLYHGDRERMEAWQNGGFPPEDEIRRAQLEGISRRLQGFCLTLSRL 512

Query: 361 PTFRRRYIEVVKALVEEAQKQWRELDDRGSID 456
           PT RR +  VVK + +EA+   R LD   ++D
Sbjct: 513 PTSRRWFDGVVKEIEQEAR---RGLDGFDALD 541


>ref|XP_002522369.1| conserved hypothetical protein [Ricinus communis]
           gi|223538447|gb|EEF40053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 550

 Score =  189 bits (481), Expect = 2e-46
 Identities = 89/154 (57%), Positives = 116/154 (75%)
 Frame = +1

Query: 1   VNIGIPAYTFVQCFLRSIRSGSIGFLMRDNVEVTNLNRPEGRVFDWLYDPMCVMKEQIKX 180
           +N GIPAY F++CFL SI+S S GF++RD+VE+T++NRPEGRVFDWLY+PMC+MKEQIK 
Sbjct: 396 INTGIPAYAFLECFLHSIKSSSSGFILRDDVEITSVNRPEGRVFDWLYEPMCIMKEQIKS 455

Query: 181 XXXXXXXXXXXCKLSLYSADAQRVEAWQNGGVPPNDEIRRAQLEAISRRLQAFCLTLSRL 360
                       K  LY  DA R+E+W N G+PP+D+IRRAQLE +SRRLQ FCLTLSRL
Sbjct: 456 LSLNKTEELYFYKHCLYGGDAARIESWLNDGIPPDDKIRRAQLEGLSRRLQGFCLTLSRL 515

Query: 361 PTFRRRYIEVVKALVEEAQKQWRELDDRGSIDAA 462
           PT RRR+ EVVKA+ ++A++     D+   ++AA
Sbjct: 516 PTSRRRFFEVVKAIEQDAKESNTLGDEDVDLEAA 549


>ref|XP_002310174.1| predicted protein [Populus trichocarpa] gi|222853077|gb|EEE90624.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  182 bits (462), Expect = 3e-44
 Identities = 84/139 (60%), Positives = 103/139 (74%)
 Frame = +1

Query: 1   VNIGIPAYTFVQCFLRSIRSGSIGFLMRDNVEVTNLNRPEGRVFDWLYDPMCVMKEQIKX 180
           ++ GIPAY F++CFLRS + GS G ++RD VE+T LNRPEGR+FDWLY+PMC+MKEQI  
Sbjct: 395 IDNGIPAYAFLECFLRSFKHGSYGLILRDKVEITRLNRPEGRIFDWLYEPMCIMKEQISS 454

Query: 181 XXXXXXXXXXXCKLSLYSADAQRVEAWQNGGVPPNDEIRRAQLEAISRRLQAFCLTLSRL 360
                       K  LY  D  R++ W NGG PP+DEI+RAQLE ISRRLQ FCLTLSRL
Sbjct: 455 LKLDESEELYFYKHCLYGGDENRIKTWLNGGTPPSDEIKRAQLEGISRRLQGFCLTLSRL 514

Query: 361 PTFRRRYIEVVKALVEEAQ 417
           PT RRR+ EVVKA+ +EA+
Sbjct: 515 PTSRRRFCEVVKAIEQEAK 533


>gb|ABR16110.1| unknown [Picea sitchensis]
          Length = 605

 Score =  125 bits (315), Expect = 3e-27
 Identities = 59/134 (44%), Positives = 87/134 (64%)
 Frame = +1

Query: 1   VNIGIPAYTFVQCFLRSIRSGSIGFLMRDNVEVTNLNRPEGRVFDWLYDPMCVMKEQIKX 180
           +++G+PAY+ +Q  L S +  S GF   D  E+T +NR   R+F+W ++P+ ++KEQIK 
Sbjct: 407 LSVGLPAYSILQNLLCSAKHDSAGFRFTDGTEITAMNRTGDRLFEWFFEPLMIIKEQIKA 466

Query: 181 XXXXXXXXXXXCKLSLYSADAQRVEAWQNGGVPPNDEIRRAQLEAISRRLQAFCLTLSRL 360
                       KL L S    R++AWQNGG+PP D++RRA+LEA+SRRLQ    ++S +
Sbjct: 467 EQLEESEELYLSKLVLLSGFPDRMKAWQNGGIPPPDDVRRAELEALSRRLQGIAASISIM 526

Query: 361 PTFRRRYIEVVKAL 402
           PTFRRR+  VV+ L
Sbjct: 527 PTFRRRFQNVVRNL 540


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