BLASTX nr result
ID: Coptis25_contig00021977
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021977 (829 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinu... 142 9e-32 ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helica... 140 5e-31 emb|CBI26949.3| unnamed protein product [Vitis vinifera] 137 3e-30 dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare] 126 5e-27 gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japo... 125 1e-26 >ref|XP_002526307.1| ATP-dependent RNA helicase, putative [Ricinus communis] gi|223534388|gb|EEF36096.1| ATP-dependent RNA helicase, putative [Ricinus communis] Length = 1172 Score = 142 bits (358), Expect = 9e-32 Identities = 90/207 (43%), Positives = 127/207 (61%), Gaps = 21/207 (10%) Frame = -2 Query: 573 MKEKSPSATLYVPPHQRLKSIVV--SSKSNATSSPTHSPLHLXXXXNSVIKPSPCIPLPH 400 MK++ PS+ +YVPPHQRL+S++ S S + +S L+ ++V+ SP +P+ Sbjct: 1 MKDRPPSS-VYVPPHQRLRSVITKPSYTSGSAASSVGDNLNHNHNRSAVLNGSP---VPY 56 Query: 399 FPQQEKQQRKRSWEDDNNN------------VEKEYDIFMETSNFV-------SPREWKC 277 F QQ QQ+ + D N + E+ D ME+S + + +EWK Sbjct: 57 FQQQ--QQQGNGFVDKNISNYKFISAYGDGVFEEGSDREMESSTVLPGASLSDNIQEWKW 114 Query: 276 KINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDL 97 K+ ML R++ +QE+V +DKKDR DF++IA A+ +GLYSQ Y K VV SK+ L NYRFDL Sbjct: 115 KLTMLLRDKEKQELVSRDKKDRRDFDQIAALASGMGLYSQLYVKVVVFSKIPLPNYRFDL 174 Query: 96 DDRRPQREVITKLGLQRRVDALLIEYM 16 DD+RPQREV LGLQ+RVDA L EY+ Sbjct: 175 DDKRPQREVNLPLGLQKRVDAYLGEYL 201 >ref|XP_002280133.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis vinifera] Length = 1195 Score = 140 bits (352), Expect = 5e-31 Identities = 91/199 (45%), Positives = 120/199 (60%), Gaps = 13/199 (6%) Frame = -2 Query: 573 MKEKSPSATL--YVPPHQRLKSIVVSSKS---NATSSPTHSPLHLXXXXNSVIKPSPCIP 409 MK++ P + + Y+PPH RL+S V SS S NA S + S H +++ P Sbjct: 27 MKDRPPPSCVSRYIPPHHRLRSAVTSSASPNLNAASLDSTSRDH----QGTLLNPRNT-S 81 Query: 408 LPHFPQQEKQQRKRSWEDD--NNNVEKEYDIFMETSNFVSPR------EWKCKINMLDRN 253 LPH Q+ QQ+ S D E+ D +E+S+ EWK K ML RN Sbjct: 82 LPHSQPQKLQQKDNSLYDFLYEEVSEEGSDREIESSSHGGASAPDTIDEWKWKFTMLLRN 141 Query: 252 ENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDLDDRRPQRE 73 +++QE+V ++KKDR DFE+IA+ A+++GLYS Y K VV SKV L NYRFDLDDRRPQRE Sbjct: 142 KDKQELVSREKKDRRDFEQIAILASRMGLYSHLYVKVVVFSKVPLPNYRFDLDDRRPQRE 201 Query: 72 VITKLGLQRRVDALLIEYM 16 VI LGL RRV+A L EY+ Sbjct: 202 VILPLGLDRRVEAHLEEYL 220 >emb|CBI26949.3| unnamed protein product [Vitis vinifera] Length = 1181 Score = 137 bits (345), Expect = 3e-30 Identities = 90/211 (42%), Positives = 120/211 (56%), Gaps = 25/211 (11%) Frame = -2 Query: 573 MKEKSPSATL--YVPPHQRLKSIVVSSKS---NATSSPTHSPLHLXXXXNSVIKPSPCIP 409 MK++ P + + Y+PPH RL+S V SS S NA S + S H +++ P Sbjct: 1 MKDRPPPSCVSRYIPPHHRLRSAVTSSASPNLNAASLDSTSRDH----QGTLLNPRNT-S 55 Query: 408 LPHFPQQEKQQRKRSW-----------------EDDNNNVEKEYDIFMETSNFVSPR--- 289 LPH Q+ QQ+ S E ++ V + + E +P Sbjct: 56 LPHSQPQKLQQKDNSLYDFLYEEVSEEGSDREIESSSHGVSLIHLLVCEFGGASAPDTID 115 Query: 288 EWKCKINMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANY 109 EWK K ML RN+++QE+V ++KKDR DFE+IA+ A+++GLYS Y K VV SKV L NY Sbjct: 116 EWKWKFTMLLRNKDKQELVSREKKDRRDFEQIAILASRMGLYSHLYVKVVVFSKVPLPNY 175 Query: 108 RFDLDDRRPQREVITKLGLQRRVDALLIEYM 16 RFDLDDRRPQREVI LGL RRV+A L EY+ Sbjct: 176 RFDLDDRRPQREVILPLGLDRRVEAHLEEYL 206 >dbj|BAJ86954.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 1247 Score = 126 bits (317), Expect = 5e-27 Identities = 76/203 (37%), Positives = 113/203 (55%), Gaps = 24/203 (11%) Frame = -2 Query: 546 LYVPPHQRLKSIVVSSKSNATSSPTHSPLHLXXXXN---SVIKPSPCIPL--------PH 400 +YVPP +RL+S++ S+ N P P S+ PSP P P Sbjct: 59 VYVPPMRRLRSVIASTNGNLAPPPAVQPAWTPDWRADGRSLSPPSPPQPQQRRAAQLPPR 118 Query: 399 FPQQEKQQRKRSW-----------EDDNNNVEKEYDIFME--TSNFVSPREWKCKINMLD 259 P Q + R++S E+D++ + + S + EWK K++ML Sbjct: 119 PPPQTQPLRQQSAGYSRYAYDDFSEEDSDREMDRTSVSSKGGASTLENVDEWKWKLHMLL 178 Query: 258 RNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDLDDRRPQ 79 RN+NEQE++ ++KKDR DF+++A A ++GL+S++Y + +V SKV L NYR DLDD+RPQ Sbjct: 179 RNDNEQEIMSREKKDRRDFDQLAQLADRMGLHSRQYSRIIVFSKVPLPNYRSDLDDKRPQ 238 Query: 78 REVITKLGLQRRVDALLIEYMRK 10 REV GLQR VDALL +Y+ + Sbjct: 239 REVSIPSGLQREVDALLADYLAR 261 >gb|EEE53770.1| hypothetical protein OsJ_00159 [Oryza sativa Japonica Group] Length = 1700 Score = 125 bits (314), Expect = 1e-26 Identities = 80/207 (38%), Positives = 113/207 (54%), Gaps = 28/207 (13%) Frame = -2 Query: 546 LYVPPHQRLKSIVVSSKSN--------ATSSPTHSPLHLXXXXNSVIKPSPCIP----LP 403 +YVPP +RL+S++ S+ + A + P +P + PSP P P Sbjct: 517 VYVPPMRRLRSVIASTNGSLAPPPSAAAQAQPVRAPEWRADGRSLSPPPSPPRPPRRATP 576 Query: 402 HFPQQEKQQRKRSWEDDNNNVEKEYDIFMETSN-------FVSPR---------EWKCKI 271 P+Q Q + + YD F E + VS R EWK K+ Sbjct: 577 PPPRQPPPQPEPFRQRSAGYARYAYDDFSEDDSDREMDRTSVSSRGGSTLDNIDEWKWKL 636 Query: 270 NMLDRNENEQEVVLKDKKDRTDFEEIALFATKLGLYSQKYPKAVVVSKVQLANYRFDLDD 91 +ML RNE+EQEV+ +++KDR DFE+++ A ++GLYS++Y + VV SKV L NYR DLDD Sbjct: 637 HMLLRNEDEQEVISRERKDRRDFEQLSQLAERMGLYSRQYSRIVVFSKVPLPNYRSDLDD 696 Query: 90 RRPQREVITKLGLQRRVDALLIEYMRK 10 +RPQREV GLQR VDALL +Y+ + Sbjct: 697 KRPQREVSIPSGLQREVDALLSDYLAR 723