BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021968
         (930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126
emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,...   440   e-121
ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   438   e-121
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   436   e-120
ref|XP_002458830.1| hypothetical protein SORBIDRAFT_03g041040 [S...   436   e-120

>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
            predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  456 bits (1174), Expect = e-126
 Identities = 237/297 (79%), Positives = 252/297 (84%)
 Frame = -3

Query: 892  IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 713
            +EYGETDAWLSMELMFHLS+LPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY
Sbjct: 566  VEYGETDAWLSMELMFHLSILPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 625

Query: 712  IVPDKISAREKEAISAKRRMSHGAEGGDADNVDLKGIPSEDGLQQLDQXXXXXGPAYAGG 533
            IVPDK+S+R KEA   KRR+++G E  +AD +D      E+  QQ D      GPAYAGG
Sbjct: 626  IVPDKMSSRVKEAKITKRRINNGIEDRNADELDTDAANFENDNQQSDHGKRKKGPAYAGG 685

Query: 532  LVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSADGSAPRRNLYELWFYAL*L 353
            LVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTVERS DG  PR    +       L
Sbjct: 686  LVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSMDGLVPRLPSSKTTGVLPEL 745

Query: 352  LKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLAELI 173
            LKNLVERR+  K W+K ASGLK QQLDIQQQALKLTANSMYGCLGF NSRFYAKPLAELI
Sbjct: 746  LKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAELI 805

Query: 172  TLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAQAKVIAGKVIQEVNKK 2
            TLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDI +AK IAGKVIQEVNKK
Sbjct: 806  TLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIPKAKAIAGKVIQEVNKK 862


>emb|CBH32589.1| DNA polymerase alpha catalytic subunit,putative,expressed [Triticum
            aestivum]
          Length = 1516

 Score =  440 bits (1131), Expect = e-121
 Identities = 230/298 (77%), Positives = 254/298 (85%), Gaps = 1/298 (0%)
 Frame = -3

Query: 892  IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 713
            +EYGETDAWLS+ELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLH+FHAKK+
Sbjct: 777  VEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHSFHAKKF 836

Query: 712  IVPDKISAREKEAISAKRRMSHGAEGGDADNVDLKGIPS-EDGLQQLDQXXXXXGPAYAG 536
            I+PDK +AR KE  SAKR+++   EGG+A   D    PS +D +   DQ     GP+YAG
Sbjct: 837  IIPDKFAARNKELNSAKRKLNADTEGGNA--ADGAADPSIDDEVHNGDQGKARKGPSYAG 894

Query: 535  GLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSADGSAPRRNLYELWFYAL* 356
            GLVLEPKKGLYDKYILLLDFNSLYPSIIQE+NICFTTVERS+DG+ P     +       
Sbjct: 895  GLVLEPKKGLYDKYILLLDFNSLYPSIIQEFNICFTTVERSSDGNLPNLPNSKATGVLPE 954

Query: 355  LLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLAEL 176
            LLK+LVERR+  K WLKTASGLK QQ DIQQQALKLTANSMYGCLGF NSRF+AKPLAEL
Sbjct: 955  LLKSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFFAKPLAEL 1014

Query: 175  ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAQAKVIAGKVIQEVNKK 2
            ITLQGREILQ+TVDLVQNNLNLEVIYGDTDSIMIY+GLDDI++AK IAGKVIQEVNKK
Sbjct: 1015 ITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIYTGLDDISKAKAIAGKVIQEVNKK 1072


>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  438 bits (1127), Expect = e-121
 Identities = 234/298 (78%), Positives = 247/298 (82%), Gaps = 1/298 (0%)
 Frame = -3

Query: 892  IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 713
            IEYGETDAWLSMELMFHLSVLPLTR LTNISGNLWGKTLQGARAQRVEYLLLH FHAKKY
Sbjct: 780  IEYGETDAWLSMELMFHLSVLPLTRLLTNISGNLWGKTLQGARAQRVEYLLLHEFHAKKY 839

Query: 712  IVPDKISAREKEAISAKRRMSHG-AEGGDADNVDLKGIPSEDGLQQLDQXXXXXGPAYAG 536
            IVPDKIS+  +E    KRRM+ G AE  + D +D+     E+     +Q     GPAY+G
Sbjct: 840  IVPDKISSHLRETKWTKRRMNQGGAEDRNIDELDVDDAHVENDAHHNNQGKGKKGPAYSG 899

Query: 535  GLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSADGSAPRRNLYELWFYAL* 356
            GLVLEPK+GLYDKYILLLDFNSLYPSIIQEYNICFTTVERS DGS PR    +       
Sbjct: 900  GLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSPDGSVPRLPSSKTTGVLPE 959

Query: 355  LLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLAEL 176
            LLK LVERRK  K  LKTASGLK QQLDIQQQALKLTANSMYGCLGF NSRFYAKPLAEL
Sbjct: 960  LLKKLVERRKTVKSRLKTASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAEL 1019

Query: 175  ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAQAKVIAGKVIQEVNKK 2
            ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIY+GLDDI +AK IAGKVIQEVNKK
Sbjct: 1020 ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYTGLDDITKAKAIAGKVIQEVNKK 1077


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  436 bits (1121), Expect = e-120
 Identities = 229/298 (76%), Positives = 247/298 (82%), Gaps = 1/298 (0%)
 Frame = -3

Query: 892  IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 713
            IE+GETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY
Sbjct: 780  IEFGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 839

Query: 712  IVPDKISAR-EKEAISAKRRMSHGAEGGDADNVDLKGIPSEDGLQQLDQXXXXXGPAYAG 536
            IVPDK S   +KE    KRR+ +G E  +A+ +D      ++   + D+     GPAY G
Sbjct: 840  IVPDKNSFHLKKETKMTKRRIHNGVEEKNAEELDTDHANFDNDSPENDRGKGKKGPAYVG 899

Query: 535  GLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSADGSAPRRNLYELWFYAL* 356
            GLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTVE+S DG  PR    +       
Sbjct: 900  GLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVEKSTDGLVPRLPSIKTTGVLPE 959

Query: 355  LLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLAEL 176
            LLKNLVERR+  K W+K ASGLK QQLDIQQQALKLTANSMYGCLGF NSRFYAKPLAEL
Sbjct: 960  LLKNLVERRRMVKSWMKNASGLKVQQLDIQQQALKLTANSMYGCLGFSNSRFYAKPLAEL 1019

Query: 175  ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAQAKVIAGKVIQEVNKK 2
            ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGL+DI +AK IAGKVIQEVNKK
Sbjct: 1020 ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLEDITKAKAIAGKVIQEVNKK 1077


>ref|XP_002458830.1| hypothetical protein SORBIDRAFT_03g041040 [Sorghum bicolor]
            gi|241930805|gb|EES03950.1| hypothetical protein
            SORBIDRAFT_03g041040 [Sorghum bicolor]
          Length = 1541

 Score =  436 bits (1120), Expect = e-120
 Identities = 230/298 (77%), Positives = 252/298 (84%), Gaps = 1/298 (0%)
 Frame = -3

Query: 892  IEYGETDAWLSMELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHAFHAKKY 713
            +EYGETDAWLS+ELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLH+FHA+K+
Sbjct: 800  VEYGETDAWLSLELMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLLLHSFHARKF 859

Query: 712  IVPDKISAREKEAISAKRRMSHGAEGGDADNVDLKGIPS-EDGLQQLDQXXXXXGPAYAG 536
            IVPDK  AR KE  S KR+M+   EG +AD  D    PS +D +   DQ     GP+YAG
Sbjct: 860  IVPDKF-ARNKELNSTKRKMNADTEGANAD--DGAADPSVDDEVHNGDQGKARKGPSYAG 916

Query: 535  GLVLEPKKGLYDKYILLLDFNSLYPSIIQEYNICFTTVERSADGSAPRRNLYELWFYAL* 356
            GLVLEPKKGLYDKY+LLLDFNSLYPSIIQEYNICFTTVERS+DGS P     +       
Sbjct: 917  GLVLEPKKGLYDKYVLLLDFNSLYPSIIQEYNICFTTVERSSDGSVPNLPASKATGVLPE 976

Query: 355  LLKNLVERRKNAKRWLKTASGLKYQQLDIQQQALKLTANSMYGCLGFPNSRFYAKPLAEL 176
            LL++LVERR+  K WLKTASGLK QQ DIQQQALKLTANSMYGCLGF NSRFYAKPLAEL
Sbjct: 977  LLRSLVERRRMVKSWLKTASGLKRQQFDIQQQALKLTANSMYGCLGFSNSRFYAKPLAEL 1036

Query: 175  ITLQGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDIAQAKVIAGKVIQEVNKK 2
            ITLQGREILQ+TVDLVQNNLNLEVIYGDTDSIMI++GLDDI++AK IAGKVIQEVNKK
Sbjct: 1037 ITLQGREILQNTVDLVQNNLNLEVIYGDTDSIMIHTGLDDISRAKAIAGKVIQEVNKK 1094