BLASTX nr result

ID: Coptis25_contig00021966 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021966
         (864 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273465.1| PREDICTED: uncharacterized protein LOC100263...   119   7e-25
emb|CAN75913.1| hypothetical protein VITISV_022155 [Vitis vinifera]   118   2e-24
ref|XP_002525312.1| conserved hypothetical protein [Ricinus comm...   115   1e-23
ref|XP_002320477.1| predicted protein [Populus trichocarpa] gi|2...   107   3e-21
ref|XP_004144510.1| PREDICTED: uncharacterized protein LOC101204...   107   5e-21

>ref|XP_002273465.1| PREDICTED: uncharacterized protein LOC100263749 [Vitis vinifera]
           gi|297739194|emb|CBI28845.3| unnamed protein product
           [Vitis vinifera]
          Length = 252

 Score =  119 bits (299), Expect = 7e-25
 Identities = 51/91 (56%), Positives = 73/91 (80%)
 Frame = -1

Query: 345 VGMAFFTATTIVFGGAVIAFGVTTSKLELHSSDDIKTKGRDLIQPKFETIREQLNPLRIW 166
           +G AF  AT +VFGGA + FGV  SKL++H+SDDI+ KGR+L+QPKF+ +REQL P+RIW
Sbjct: 158 IGKAFAVATVVVFGGATLMFGVAVSKLQVHNSDDIRIKGRELVQPKFDMLREQLIPMRIW 217

Query: 165 AKKMSAEWHVEKKEAVKDSPLAKELSKRLGS 73
            + +S +WHVE++E +K+ P+ KEL+K LG+
Sbjct: 218 VENVSKKWHVEREEDIKEKPIIKELTKILGA 248


>emb|CAN75913.1| hypothetical protein VITISV_022155 [Vitis vinifera]
          Length = 252

 Score =  118 bits (296), Expect = 2e-24
 Identities = 50/91 (54%), Positives = 73/91 (80%)
 Frame = -1

Query: 345 VGMAFFTATTIVFGGAVIAFGVTTSKLELHSSDDIKTKGRDLIQPKFETIREQLNPLRIW 166
           +G AF  AT +VFGGA + FG+  SKL++H+SDDI+ KGR+L+QPKF+ +REQL P+RIW
Sbjct: 158 IGKAFAVATVVVFGGATLMFGLAVSKLQVHNSDDIRIKGRELVQPKFDMLREQLIPMRIW 217

Query: 165 AKKMSAEWHVEKKEAVKDSPLAKELSKRLGS 73
            + +S +WHVE++E +K+ P+ KEL+K LG+
Sbjct: 218 VENVSKKWHVEREEDIKEKPIIKELTKILGA 248


>ref|XP_002525312.1| conserved hypothetical protein [Ricinus communis]
           gi|223535371|gb|EEF37045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  115 bits (288), Expect = 1e-23
 Identities = 52/91 (57%), Positives = 67/91 (73%)
 Frame = -1

Query: 345 VGMAFFTATTIVFGGAVIAFGVTTSKLELHSSDDIKTKGRDLIQPKFETIREQLNPLRIW 166
           +G AF  AT +VFGGA + F    SK ELH+SDDIK KG+DL+QPK + IREQL PLRIW
Sbjct: 162 IGKAFAVATALVFGGATLVFSFAVSKFELHNSDDIKNKGKDLVQPKLDVIREQLVPLRIW 221

Query: 165 AKKMSAEWHVEKKEAVKDSPLAKELSKRLGS 73
            +  S +WH+ K+E +K+ P+ KELSK LG+
Sbjct: 222 VEGTSKKWHLNKEEDIKEKPIIKELSKFLGA 252


>ref|XP_002320477.1| predicted protein [Populus trichocarpa] gi|222861250|gb|EEE98792.1|
           predicted protein [Populus trichocarpa]
          Length = 255

 Score =  107 bits (268), Expect = 3e-21
 Identities = 48/94 (51%), Positives = 68/94 (72%)
 Frame = -1

Query: 354 LFVVGMAFFTATTIVFGGAVIAFGVTTSKLELHSSDDIKTKGRDLIQPKFETIREQLNPL 175
           L  +G AF  AT IVFGGA + F +  SKL+L +  DI+TKG+DL+QPK + IREQ  PL
Sbjct: 158 LTYIGKAFAVATAIVFGGATLVFSLAASKLDLRNGGDIRTKGKDLVQPKLDVIREQFVPL 217

Query: 174 RIWAKKMSAEWHVEKKEAVKDSPLAKELSKRLGS 73
           + WA+  S +WH++++E VK+ P+ KEL+K LG+
Sbjct: 218 KTWAEDTSKKWHLDRQEDVKEKPMVKELAKILGA 251


>ref|XP_004144510.1| PREDICTED: uncharacterized protein LOC101204303 [Cucumis sativus]
           gi|449493148|ref|XP_004159206.1| PREDICTED:
           uncharacterized LOC101204303 [Cucumis sativus]
          Length = 255

 Score =  107 bits (266), Expect = 5e-21
 Identities = 48/91 (52%), Positives = 68/91 (74%)
 Frame = -1

Query: 345 VGMAFFTATTIVFGGAVIAFGVTTSKLELHSSDDIKTKGRDLIQPKFETIREQLNPLRIW 166
           VG AF  AT +VFGGA + FG T SKL+++++ +I+TKG+ +I+PK E IR+QL P ++W
Sbjct: 161 VGKAFAAATALVFGGATLIFGFTLSKLDVNNASEIQTKGKGMIEPKMEMIRQQLVPFKVW 220

Query: 165 AKKMSAEWHVEKKEAVKDSPLAKELSKRLGS 73
           A  MS +WHVE+   +K+ PL KELSK LG+
Sbjct: 221 ADDMSKKWHVERDNDIKEKPLIKELSKILGA 251


Top