BLASTX nr result

ID: Coptis25_contig00021945 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021945
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269053.1| PREDICTED: putative disease resistance prote...    90   2e-16
ref|XP_002518080.1| leucine-rich repeat-containing protein, puta...    90   2e-16
ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocar...    88   6e-16
ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocar...    87   1e-15
ref|XP_002333124.1| cc-nbs resistance protein [Populus trichocar...    87   1e-15

>ref|XP_002269053.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
           vinifera]
          Length = 910

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 50/116 (43%), Positives = 74/116 (63%)
 Frame = -3

Query: 350 MADALVSVVLEQLTSVIXXXXXXXXXXXXXXXXEIGKLSSALTMLQTMLDDAEEKQVNEK 171
           MADAL+S+VL++L S+I                EI  L++ L +++ ++ DAE++QVNE+
Sbjct: 1   MADALLSIVLDRLASLIQQQFHHEVCLVVGVKREIQSLTNTLQIVRAVVADAEKRQVNEE 60

Query: 170 AVKLWLEKLKDVVYDANDVLDEWNTRTIISQIHRVDDDVVNGGIHKKVVSYLFSPC 3
            VK+WLE+LKD+ Y  +DVLDEW+T  + SQI RV+   +     KKV S + SPC
Sbjct: 61  PVKVWLERLKDIAYQMDDVLDEWSTAFLKSQIERVESPSMP---KKKVSSCIPSPC 113


>ref|XP_002518080.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
           gi|223542676|gb|EEF44213.1| leucine-rich
           repeat-containing protein, putative [Ricinus communis]
          Length = 940

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/98 (46%), Positives = 66/98 (67%)
 Frame = -3

Query: 350 MADALVSVVLEQLTSVIXXXXXXXXXXXXXXXXEIGKLSSALTMLQTMLDDAEEKQVNEK 171
           MADALVSVVL+QLTS++                E+ KL++ALT ++ +L+DAE+KQV E 
Sbjct: 1   MADALVSVVLQQLTSILQAEIQQEARLLFGGPEEVQKLTTALTAIRAVLNDAEKKQVKES 60

Query: 170 AVKLWLEKLKDVVYDANDVLDEWNTRTIISQIHRVDDD 57
           +V++WLE LK + YD +D+LDEWNT+    +I R+  D
Sbjct: 61  SVQVWLEGLKAISYDLDDLLDEWNTKIYRPKIERIRKD 98


>ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832447|gb|EEE70924.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 614

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/116 (38%), Positives = 72/116 (62%)
 Frame = -3

Query: 350 MADALVSVVLEQLTSVIXXXXXXXXXXXXXXXXEIGKLSSALTMLQTMLDDAEEKQVNEK 171
           MA+AL+S +LEQLT ++                ++ KL S L ++Q++L+DAE KQV +K
Sbjct: 1   MAEALLSPILEQLTKIVAQQVHEEVTLVGGVKKQVDKLKSNLIVIQSVLEDAERKQVKDK 60

Query: 170 AVKLWLEKLKDVVYDANDVLDEWNTRTIISQIHRVDDDVVNGGIHKKVVSYLFSPC 3
           AV+ W++KLKDV YD +DVLDEW++  +  ++   +++     + K   S+L SPC
Sbjct: 61  AVRDWVDKLKDVCYDMDDVLDEWSSAILTWKMEEAEEN--TRSLQKMRCSFLGSPC 114


>ref|XP_002332295.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832457|gb|EEE70934.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 566

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 47/116 (40%), Positives = 69/116 (59%)
 Frame = -3

Query: 350 MADALVSVVLEQLTSVIXXXXXXXXXXXXXXXXEIGKLSSALTMLQTMLDDAEEKQVNEK 171
           MA+ALVS +LEQLT+++                 + KL S L  +Q++L+DA+ KQV +K
Sbjct: 1   MAEALVSPILEQLTTIVAQQVQEEVNLVVGVKKHVDKLKSNLLAIQSVLEDADRKQVKDK 60

Query: 170 AVKLWLEKLKDVVYDANDVLDEWNTRTIISQIHRVDDDVVNGGIHKKVVSYLFSPC 3
           AV+ WL+KLKDV YD +DVLDEW+T  +  ++   D +     + K   S+  SPC
Sbjct: 61  AVRDWLDKLKDVCYDIDDVLDEWSTEILTWKMG--DAEQYTDSLQKMRCSFQRSPC 114


>ref|XP_002333124.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222834935|gb|EEE73384.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 486

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 45/116 (38%), Positives = 72/116 (62%)
 Frame = -3

Query: 350 MADALVSVVLEQLTSVIXXXXXXXXXXXXXXXXEIGKLSSALTMLQTMLDDAEEKQVNEK 171
           MA+AL+S +LEQLT+V+                ++ KL S L  +Q++L+DA+ KQV +K
Sbjct: 1   MAEALLSPILEQLTTVVAQQVQEEVSLVGGVKKQVDKLKSNLIAIQSVLEDADRKQVKDK 60

Query: 170 AVKLWLEKLKDVVYDANDVLDEWNTRTIISQIHRVDDDVVNGGIHKKVVSYLFSPC 3
           AV+ W++KLKDV YD +DVLDEW++  +  ++   +++     + K   S+L SPC
Sbjct: 61  AVRDWVDKLKDVCYDMDDVLDEWSSAILTWKMEEAEEN--TRSLQKMRCSFLGSPC 114


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