BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021931
         (1547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]   136   2e-31
emb|CBI15337.3| unnamed protein product [Vitis vinifera]              111   4e-26
ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|2...   112   5e-25
ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-13
dbj|BAJ24862.1| S-locus linked F-box protein type-3 [Petunia axi...    81   9e-13

>emb|CAN77786.1| hypothetical protein VITISV_023232 [Vitis vinifera]
          Length = 377

 Score =  136 bits (342), Expect(2) = 2e-31
 Identities = 114/393 (29%), Positives = 181/393 (46%), Gaps = 9/393 (2%)
 Frame = +3

Query: 297  CI*LSKGWYALTKDPVFIGKHLNRSLC-LPRRILLQPQCIDPLNPKSMEPVTSLFLIQSD 473
            C  + K WY LTKD  F      R+   +PR + +             +   S+FL+   
Sbjct: 40   CRSVCKTWYGLTKDSYFFKLQFRRTFYHMPRLMFIS------------KSENSVFLLDGK 87

Query: 474  EWKGKEIPVDNVPGDYGITLCSCHGLLCVFACSTLCSKSAS--LVIYNPITRESLELPET 647
            + K +EI +  V G   I + SC+GLLC      L S+ +   ++I NPITR+ + LPE+
Sbjct: 88   QCKAREIALPTVLGRNLIVMSSCNGLLC------LASEESPNPVIISNPITRKYIVLPES 141

Query: 648  GFDLKAAYLSVGFGFDSTSKKYKVVQFFKFRIGNDQCMKGEIITLGEGSWRELDLSGMVL 827
                 +    VG G+D  + KYKVV+ +   I N +  + EIITLGE SWR+LD+   V+
Sbjct: 142  VNASYSFIQLVGLGYDPWNMKYKVVRSY---IDNSKFTRFEIITLGEASWRQLDVPCRVV 198

Query: 828  CDRVAKSVFLDGALHWMIESEDH---SGCDKILVLDLCDENFQTIKPPSSIIDAIRYPXX 998
            C R ++ ++ +GAL+W+++ + H    GC  IL  DL +E F  I  P +    IR P  
Sbjct: 199  CGRNSRPIYCEGALYWILDKKFHYDGDGC--ILAFDLREEKFGMIALPPN----IRMPTG 252

Query: 999  XXXXXXXXXXXXXXXXXXXXXXIDAIRYPAKVFLLNLGGSLSLVEHNSCEHFCVWRIVHA 1178
                                       Y   + LLN+ G L+++  + C+   +W+++  
Sbjct: 253  NPGL-----------------------YNGSLHLLNVAGCLTVIA-DECQFLHIWQVMR- 287

Query: 1179 NTKKDYKFYKSSHSMTMPYNTFIDNVGLQDVLID---NNFLFHVKLGNLGLGIDRKDHLS 1349
            N  + +        M   ++ F      Q VL+D   ++ L  V       G+  +  L 
Sbjct: 288  NRDRGFSVRYRRSDMHCRWSVF-----SQPVLLDWCKDSLLLSVS----KFGVYSERDLV 338

Query: 1350 LYLPEKGKYQTVMVSGSPKTFNANMFVPCLVSP 1448
             Y PE+ +Y    + G PK F +  F P L+SP
Sbjct: 339  EYFPERKQYAGHHIRGLPKWFRSCSFKPNLISP 371



 Score = 27.3 bits (59), Expect(2) = 2e-31
 Identities = 13/27 (48%), Positives = 22/27 (81%)
 Frame = +1

Query: 220 VVSLLPELISDILSRLTIEDIVRFKSV 300
           +++L  ++++DILS L IEDI+R +SV
Sbjct: 17  LLNLPLDIMADILSLLPIEDILRCRSV 43


>emb|CBI15337.3| unnamed protein product [Vitis vinifera]
          Length = 552

 Score =  111 bits (277), Expect(2) = 4e-26
 Identities = 105/386 (27%), Positives = 168/386 (43%), Gaps = 2/386 (0%)
 Frame = +3

Query: 297  CI*LSKGWYALTKDPVFIGKHLNRSLCLPRRILLQPQCIDPLNPKSMEPVTSLFLIQSDE 476
            C  + K W ++ + P+FI     +S   P R++L+P         +   + SLFL+ ++E
Sbjct: 174  CRSVCKTWNSVIQSPLFINLQARKSHNQPSRVILKPI----FGGVTATTMHSLFLLDTEE 229

Query: 477  WKGKEIPVDNVPGDYGITLCSCHGLLCVFACSTLCSKSASLVIYNPITRESLELP--ETG 650
             K + I   +        + SC+GLLC+ + S L      + I NPITRE + LP  ETG
Sbjct: 230  RKSRRIHDKSWRFSGLQIMSSCNGLLCITSDSEL----GPVYISNPITREFVILPSPETG 285

Query: 651  FDLKAAYLSVGFGFDSTSKKYKVVQFFKFRIGNDQCMKGEIITLGEGSWRELDLSGMVLC 830
            F L      VG GFDS++ KY VV+ +  +    Q  K E I LGE SWR L +  ++  
Sbjct: 286  FSLLRH--QVGLGFDSSNGKYIVVRAYTDK-SKSQVNKFEAIMLGENSWRSLTVPDIIAE 342

Query: 831  DRVAKSVFLDGALHWMIESEDHSGCDKILVLDLCDENFQTIKPPSSIIDAIRYPXXXXXX 1010
              +  SVF +GALHW I+ +    C  +L  D+    F   + P S              
Sbjct: 343  CTINGSVFWNGALHWKIKKKPGREC--MLSFDVSSGKFAVTRFPVS-------------- 386

Query: 1011 XXXXXXXXXXXXXXXXXXIDAIRYPAKVFLLNLGGSLSLVEHNSCEHFCVWRIVHANTKK 1190
                                    P    ++ L G LSLV+    +   +WR+     + 
Sbjct: 387  ---------------------ADVPDDFEMVELDGHLSLVQVYDTQ-MKIWRVTGEKIEG 424

Query: 1191 DYKFYKSSHSMTMPYNTFIDNVGLQDVLIDNNFLFHVKLGNLGLGIDRKDHLSLYLPEKG 1370
                Y+  + M + +N+   N  +    ID  +L  V   + G G   + +L+ Y P+  
Sbjct: 425  LSVCYEDMYCMNVRWNSSF-NCEIIRGYIDEGYLLQVNT-HRGPGGAWRRYLTQYFPKME 482

Query: 1371 KYQTVMVSGSPKTFNANMFVPCLVSP 1448
            ++ ++++   P  F    F P L+SP
Sbjct: 483  QFLSLIIPSIPICFKTISFRPTLISP 508



 Score = 34.7 bits (78), Expect(2) = 4e-26
 Identities = 19/27 (70%), Positives = 22/27 (81%)
 Frame = +1

Query: 220 VVSLLPELISDILSRLTIEDIVRFKSV 300
           V  LLPELIS+ILSRL IE I+R +SV
Sbjct: 151 VNDLLPELISEILSRLPIELILRCRSV 177


>ref|XP_002310062.1| predicted protein [Populus trichocarpa] gi|222852965|gb|EEE90512.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  112 bits (280), Expect(2) = 5e-25
 Identities = 109/409 (26%), Positives = 167/409 (40%), Gaps = 28/409 (6%)
 Frame = +3

Query: 312  KGWYALTKDPVFIGKHLNRSLCLPRRILLQPQCIDPLNPKSMEPVTSLFLIQSDEWKGKE 491
            K W  + + P FI   L  +   P R ++Q Q            ++SL+L+  ++ K +E
Sbjct: 46   KSWCRMIQSPYFISLQLGVTKNKPCRFIVQSQ--------REGDMSSLYLVDIEDLKARE 97

Query: 492  IPVDNVPGDYGITL--------CSCHGLLCVFACSTLCSKSASLVIYNPITRESLELPET 647
            I ++ +     +          C C G LC+ +   L      + I NPIT+ES+ LP +
Sbjct: 98   IQLEKIKCRTRLKFKLPALGVRCFCDGFLCMASEKRL----DPVCICNPITKESVILPLS 153

Query: 648  GFDLKAAYLSVGFGFDSTSKKYKVVQFFKFRIGNDQCMKGEIITLGEGSWRELDLSGMVL 827
                      + FGFD +S KYKV++ ++    N    K +IITLGE SWR+L+    + 
Sbjct: 154  RSKAHLVRHKLAFGFDQSSGKYKVIRDYR-TSSNKHLSKFQIITLGESSWRQLNPPQNLC 212

Query: 828  CDRVAKSVFLDGALHWMIESEDHSGCDKILVLDLCDENFQTIKPPSSIIDAIRYPXXXXX 1007
                  +VF +G+LHW+I  +D +  + IL  DL  E F TI      +    Y      
Sbjct: 213  TSDWDAAVFWNGSLHWII--DDKTIDEPILAFDLSSETFYTIPFHRLCLSHECYE----- 265

Query: 1008 XXXXXXXXXXXXXXXXXXXIDAIRYPAKVFLLNLGGSLSLVEHNSCEHFCVWRIV----- 1172
                                          L  LG SL++VEHNS     +W +      
Sbjct: 266  ------------------------------LQVLGASLTIVEHNS-HMIKIWEVAGNKVK 294

Query: 1173 --HANTKKD---------YKFYKS----SHSMTMPYNTFIDNVGLQDVLIDNNFLFHVKL 1307
               AN +++         Y FYK+    SH   M    FIDN  +               
Sbjct: 295  GFSANCREEHDTYVCWNKYLFYKTISQLSHKSFMLQVCFIDNKNV--------------- 339

Query: 1308 GNLGLGIDRKDHLSLYLPEKGKYQTVMVSGSPKTFNANMFVPCLVSPSA 1454
                    +KD  + ++PEK +Y    + G P+ FN + F P  VSP+A
Sbjct: 340  --------KKDWFTRFVPEKAQYFHQDILGLPEHFNTDHFKPSFVSPNA 380



 Score = 30.0 bits (66), Expect(2) = 5e-25
 Identities = 12/24 (50%), Positives = 19/24 (79%)
 Frame = +1

Query: 229 LLPELISDILSRLTIEDIVRFKSV 300
           L PE+  ++L+RL +E I+RF+SV
Sbjct: 21  LPPEMFCEVLARLPVESILRFRSV 44


>ref|XP_002316992.1| predicted protein [Populus trichocarpa] gi|222860057|gb|EEE97604.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score = 77.4 bits (189), Expect(2) = 2e-13
 Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
 Frame = +3

Query: 297 CI*LSKGWYALTKDPVFIGKHLNRSLCLPRRILLQPQCIDPLNPKSMEPVTSLFLIQSDE 476
           C  + K W  L  DP F+  HL RS   P  +L+Q     P   K    +  + +++ D 
Sbjct: 59  CKSVCKTWLHLMSDPSFVRLHLERS---PTTLLIQKT---PFERKESTEMLLVEIVEEDI 112

Query: 477 WKGKEI------PVDNVPGDYGITLCSCHGLLCVFACSTLCSKSASLV-IYNPITRESLE 635
            K   I      P  N P      L SC+GLLC++  S    KS  +V + NP+  E ++
Sbjct: 113 SKPFYIEIIRLFPTKNFPDTDVRILNSCNGLLCLYEDSG--DKSDMMVHVCNPVLGEYID 170

Query: 636 LPETGFDLKAAYLSVGFGFDSTSKKYKVVQFF--KFRIGNDQCMKGEIITLGEGSWRELD 809
           +P    D K  +  + FGF S S +YKV+Q F  +  +    C+  EI T+G G WR + 
Sbjct: 171 IPVVNTDKKFEH-HLAFGFSSVSNQYKVLQTFYPEKDLTAAPCL-AEIYTVGTGQWRSIG 228

Query: 810 LSGMVLCDRVAKSVFLDGALHWMIESEDHSGCDKILVLDLCDENFQTIK-PPSSII 974
            +   L   +  + FL  ++HW+    +  G   +   D   E F+ +  PP+S I
Sbjct: 229 NASFRL-QSLDANAFLHDSIHWIEYRSNSIGF--VSAFDFVSEQFKLVALPPASQI 281



 Score = 25.8 bits (55), Expect(2) = 2e-13
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
 Frame = +1

Query: 133 MEKVKEL-SLGRKSGASVCVAAVQSNATQE----VVSLLPE-LISDILSRLTIEDIVRFK 294
           M K+K+  S+G K   +       S+++ E    +V+ LP  LI DILSRL I  ++  K
Sbjct: 1   MRKLKKTASVGSKRRRTAKPPGSSSSSSTEQSKCLVAELPNALIIDILSRLPIRPLLNCK 60

Query: 295 SV 300
           SV
Sbjct: 61  SV 62


>dbj|BAJ24862.1| S-locus linked F-box protein type-3 [Petunia axillaris subsp.
           axillaris]
          Length = 385

 Score = 80.9 bits (198), Expect = 9e-13
 Identities = 69/234 (29%), Positives = 100/234 (42%), Gaps = 15/234 (6%)
 Frame = +3

Query: 306 LSKGWYALTKDPVFIGKHLNRSLCLPRRILLQPQCIDPLNPKSMEPVTSLFL--IQSDEW 479
           ++K WYAL +   FI +HLNR+  +    +L  +       +    V S  +  +  D+ 
Sbjct: 30  VTKSWYALIQSVDFINRHLNRATTITDEFILFKRSFK--EQEGFRNVMSFLVGGVGEDDL 87

Query: 480 KGKEIPVDNVPGDYGITLCSCHGLLCVFACSTLCSKSASLVIYNPITRESLELPETGFDL 659
                 VD VP       C CH L        L + S +LV+ NP TR    LP + F +
Sbjct: 88  DPISPDVD-VPYLSTSYSCICHQLTGPCHGLILLTDSTNLVLLNPATRNYRLLPPSPFGI 146

Query: 660 KAAY----LSVGFGFDSTSKKYKVVQFFK------FRIGNDQCMKGEIITLGEGSWRELD 809
           +  +      VGFG+DS  K YKVV+  +      F   +    KGE+      SWRELD
Sbjct: 147 QRGFYRSIAGVGFGYDSVHKTYKVVRISEVYGEPPFNCPSVMEWKGEVYNSSTDSWRELD 206

Query: 810 LSGMVL---CDRVAKSVFLDGALHWMIESEDHSGCDKILVLDLCDENFQTIKPP 962
                L    +     +F +GA HW      H     IL  D+  E F+T++ P
Sbjct: 207 CVDQELPWPYNFAYSEIFYEGAFHWYA----HKNVVLILCFDVNTETFRTMEVP 256