BLASTX nr result

ID: Coptis25_contig00021928 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021928
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273148.2| PREDICTED: uncharacterized protein LOC100257...   119   2e-25
emb|CBI27324.3| unnamed protein product [Vitis vinifera]              119   2e-25
emb|CAN71713.1| hypothetical protein VITISV_013460 [Vitis vinifera]   119   2e-25
ref|XP_002314922.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
ref|XP_002512034.1| conserved hypothetical protein [Ricinus comm...    74   2e-11

>ref|XP_002273148.2| PREDICTED: uncharacterized protein LOC100257674 [Vitis vinifera]
          Length = 407

 Score =  119 bits (299), Expect = 2e-25
 Identities = 72/173 (41%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
 Frame = +1

Query: 1   LPTGKVISIDDDEISASETENADGGGNHQDSGATSSKASCPSV--SQSSEEANVDECQLN 174
           +P   +ISIDDDE +    EN        DS A+SSK SCP+   SQ+S     +ECQ  
Sbjct: 72  VPLESIISIDDDESTDIHPENGAESRGDLDSDASSSKRSCPASNHSQNSVGLEAEECQFI 131

Query: 175 RKRKIPMKFSKSKRTYSEKTFSRNYFGWGPL-----CXXXXXXXXXXXCEIIEGSCGKIS 339
           R+RK P+K SK KRTYS K  SRN +G  P+                 CE++EGS GK+ 
Sbjct: 132 RERKSPVKLSKCKRTYSGKAPSRNRYGLDPMPESTSPESTSSESGLSDCELMEGSRGKLH 191

Query: 340 EQWDRAALKKRTFEGIPIGQPGLDDEASGSGSFADVPKHVEVENSAEQHVRDP 498
           EQW++A LK++        +  L D+ S SGS  D P ++EVEN  EQH   P
Sbjct: 192 EQWEQAYLKRKDVP--QTAKSDLGDQPSASGSNTDTPPNIEVENMTEQHQETP 242


>emb|CBI27324.3| unnamed protein product [Vitis vinifera]
          Length = 620

 Score =  119 bits (299), Expect = 2e-25
 Identities = 72/173 (41%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
 Frame = +1

Query: 1   LPTGKVISIDDDEISASETENADGGGNHQDSGATSSKASCPSV--SQSSEEANVDECQLN 174
           +P   +ISIDDDE +    EN        DS A+SSK SCP+   SQ+S     +ECQ  
Sbjct: 41  VPLESIISIDDDESTDIHPENGAESRGDLDSDASSSKRSCPASNHSQNSVGLEAEECQFI 100

Query: 175 RKRKIPMKFSKSKRTYSEKTFSRNYFGWGPL-----CXXXXXXXXXXXCEIIEGSCGKIS 339
           R+RK P+K SK KRTYS K  SRN +G  P+                 CE++EGS GK+ 
Sbjct: 101 RERKSPVKLSKCKRTYSGKAPSRNRYGLDPMPESTSPESTSSESGLSDCELMEGSRGKLH 160

Query: 340 EQWDRAALKKRTFEGIPIGQPGLDDEASGSGSFADVPKHVEVENSAEQHVRDP 498
           EQW++A LK++        +  L D+ S SGS  D P ++EVEN  EQH   P
Sbjct: 161 EQWEQAYLKRKDVP--QTAKSDLGDQPSASGSNTDTPPNIEVENMTEQHQETP 211


>emb|CAN71713.1| hypothetical protein VITISV_013460 [Vitis vinifera]
          Length = 638

 Score =  119 bits (299), Expect = 2e-25
 Identities = 72/173 (41%), Positives = 94/173 (54%), Gaps = 7/173 (4%)
 Frame = +1

Query: 1   LPTGKVISIDDDEISASETENADGGGNHQDSGATSSKASCPSV--SQSSEEANVDECQLN 174
           +P   +ISIDDDE +    EN        DS A+SSK SCP+   SQ+S     +ECQ  
Sbjct: 72  VPLESIISIDDDESTDIHPENGAESRGDLDSDASSSKRSCPASNHSQNSVGLEAEECQFI 131

Query: 175 RKRKIPMKFSKSKRTYSEKTFSRNYFGWGPL-----CXXXXXXXXXXXCEIIEGSCGKIS 339
           R+RK P+K SK KRTYS K  SRN +G  P+                 CE++EGS GK+ 
Sbjct: 132 RERKSPVKLSKCKRTYSGKAPSRNRYGLDPMPESTSPESTSSESGLSDCELMEGSRGKLH 191

Query: 340 EQWDRAALKKRTFEGIPIGQPGLDDEASGSGSFADVPKHVEVENSAEQHVRDP 498
           EQW++A LK++        +  L D+ S SGS  D P ++EVEN  EQH   P
Sbjct: 192 EQWEQAYLKRKDVP--QTAKSDLGDQPSASGSNTDTPPNIEVENMTEQHQETP 242


>ref|XP_002314922.1| predicted protein [Populus trichocarpa] gi|222863962|gb|EEF01093.1|
           predicted protein [Populus trichocarpa]
          Length = 724

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 50/170 (29%), Positives = 75/170 (44%), Gaps = 15/170 (8%)
 Frame = +1

Query: 22  SIDDDEISASETENADGGGNHQDSGATSSKASCPSVSQSSEEANVDECQLNRKRKIPMKF 201
           ++DD EI+     N D  G    S   S     P         + D C++  + +   K 
Sbjct: 97  TVDDHEINEQVDGNLDSDGTSSPSSPASDHIEKPV------HRDADGCRVAEENRPVFKL 150

Query: 202 SKSKRTYSEKTFSRNYFGWGPLCXXXXXXXXXXX---------------CEIIEGSCGKI 336
            K  RTY+EK  SRN +G                               CE++EGS G++
Sbjct: 151 RKCNRTYAEKATSRNRYGLDSDAEKATSRNRYGLDSDAESDSSEDNTSDCEVMEGSFGEV 210

Query: 337 SEQWDRAALKKRTFEGIPIGQPGLDDEASGSGSFADVPKHVEVENSAEQH 486
            EQW++A+LK+++         GLDD+AS   S +DV  +VEVEN  +Q+
Sbjct: 211 REQWEKASLKRKSMR-----CKGLDDQASPCSSHSDVHPNVEVENKTKQN 255


>ref|XP_002512034.1| conserved hypothetical protein [Ricinus communis]
           gi|223549214|gb|EEF50703.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 632

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 53/171 (30%), Positives = 83/171 (48%), Gaps = 9/171 (5%)
 Frame = +1

Query: 4   PTGKVISIDDDEI-------SASETENADGGGNHQDSGATSSKASCPSVSQSSEEANVDE 162
           P   +IS+DDDEI         +  EN     ++ D    +S AS     + SE+A+VD+
Sbjct: 47  PIPCIISLDDDEICDYVDNHEVNVDENVGLDSDYMDFSNKTSPAS--DFMRKSEDADVDD 104

Query: 163 CQLNRKRKIPMKFSKSKRTYSEKTFSRNYFG--WGPLCXXXXXXXXXXXCEIIEGSCGKI 336
           CQ+  +++   K SK  +TY++ + SRN +G  +               CE++E SC ++
Sbjct: 105 CQVVFEKRPAFKLSKCNKTYNKDSSSRNRYGLNFESETESGSSKSDSSDCEVVEISCREL 164

Query: 337 SEQWDRAALKKRTFEGIPIGQPGLDDEASGSGSFADVPKHVEVENSAEQHV 489
            EQW + A +KR       G     D+AS   S +D   +V VENS  Q +
Sbjct: 165 HEQWVK-AFQKRKLNTDYKGPLSPQDKASPCSSHSDAHPNVRVENSTRQKI 214


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