BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021921
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...    65   4e-22
ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch...    65   4e-22
gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein,...    64   3e-21
gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein,...    64   1e-20
ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-20

>ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1
           [Vitis vinifera] gi|297737314|emb|CBI26515.3| unnamed
           protein product [Vitis vinifera]
          Length = 181

 Score = 64.7 bits (156), Expect(2) = 4e-22
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 5   LVEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109
           L E+EKLA+ILEDFKMVLVV+NDLKMGKGKIAAQC
Sbjct: 55  LDEIEKLADILEDFKMVLVVRNDLKMGKGKIAAQC 89



 Score = 64.7 bits (156), Expect(2) = 4e-22
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216
           +KLL RAPKALNRWE CGQVKVVLK+ESE+D+LVLQ
Sbjct: 98  KKLLRRAPKALNRWENCGQVKVVLKTESEEDMLVLQ 133


>ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 2
           [Vitis vinifera]
          Length = 173

 Score = 64.7 bits (156), Expect(2) = 4e-22
 Identities = 31/35 (88%), Positives = 34/35 (97%)
 Frame = +2

Query: 5   LVEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109
           L E+EKLA+ILEDFKMVLVV+NDLKMGKGKIAAQC
Sbjct: 47  LDEIEKLADILEDFKMVLVVRNDLKMGKGKIAAQC 81



 Score = 64.7 bits (156), Expect(2) = 4e-22
 Identities = 30/36 (83%), Positives = 34/36 (94%)
 Frame = +1

Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216
           +KLL RAPKALNRWE CGQVKVVLK+ESE+D+LVLQ
Sbjct: 90  KKLLRRAPKALNRWENCGQVKVVLKTESEEDMLVLQ 125


>gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene
           latifolia]
          Length = 176

 Score = 63.9 bits (154), Expect(2) = 3e-21
 Identities = 29/34 (85%), Positives = 34/34 (100%)
 Frame = +2

Query: 8   VEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109
           +E+EKLA+I+EDFKMVLVV+NDLKMGKGKIAAQC
Sbjct: 51  LEIEKLADIIEDFKMVLVVRNDLKMGKGKIAAQC 84



 Score = 62.8 bits (151), Expect(2) = 3e-21
 Identities = 28/36 (77%), Positives = 34/36 (94%)
 Frame = +1

Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216
           +KL +RAPKALNRWEMCGQVKVV+K+ESE+D+L LQ
Sbjct: 93  KKLQNRAPKALNRWEMCGQVKVVVKTESEEDMLALQ 128


>gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene
           latifolia]
          Length = 176

 Score = 63.9 bits (154), Expect(2) = 1e-20
 Identities = 29/34 (85%), Positives = 34/34 (100%)
 Frame = +2

Query: 8   VEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109
           +E+EKLA+I+EDFKMVLVV+NDLKMGKGKIAAQC
Sbjct: 51  LEIEKLADIIEDFKMVLVVRNDLKMGKGKIAAQC 84



 Score = 60.8 bits (146), Expect(2) = 1e-20
 Identities = 27/36 (75%), Positives = 34/36 (94%)
 Frame = +1

Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216
           +KL +RAPKAL+RWEMCGQVKVV+K+ESE+D+L LQ
Sbjct: 93  KKLQNRAPKALSRWEMCGQVKVVVKTESEEDMLALQ 128


>ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|222839215|gb|EEE77566.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 63.5 bits (153), Expect(2) = 1e-20
 Identities = 29/36 (80%), Positives = 33/36 (91%)
 Frame = +1

Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216
           +KLLHRAPKALNRWEMC Q KVV+K ESE+D+LVLQ
Sbjct: 103 KKLLHRAPKALNRWEMCAQPKVVVKIESEEDMLVLQ 138



 Score = 60.8 bits (146), Expect(2) = 1e-20
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = +2

Query: 11  EVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109
           E +KLA+IL+DFKMVLVV+NDLKMGKGKIAAQC
Sbjct: 62  ETDKLADILDDFKMVLVVRNDLKMGKGKIAAQC 94