BLASTX nr result
ID: Coptis25_contig00021921
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021921 (217 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch... 65 4e-22 ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitoch... 65 4e-22 gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein,... 64 3e-21 gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein,... 64 1e-20 ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-20 >ref|XP_002277013.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 1 [Vitis vinifera] gi|297737314|emb|CBI26515.3| unnamed protein product [Vitis vinifera] Length = 181 Score = 64.7 bits (156), Expect(2) = 4e-22 Identities = 31/35 (88%), Positives = 34/35 (97%) Frame = +2 Query: 5 LVEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109 L E+EKLA+ILEDFKMVLVV+NDLKMGKGKIAAQC Sbjct: 55 LDEIEKLADILEDFKMVLVVRNDLKMGKGKIAAQC 89 Score = 64.7 bits (156), Expect(2) = 4e-22 Identities = 30/36 (83%), Positives = 34/36 (94%) Frame = +1 Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216 +KLL RAPKALNRWE CGQVKVVLK+ESE+D+LVLQ Sbjct: 98 KKLLRRAPKALNRWENCGQVKVVLKTESEEDMLVLQ 133 >ref|XP_002277299.1| PREDICTED: peptidyl-tRNA hydrolase 2, mitochondrial isoform 2 [Vitis vinifera] Length = 173 Score = 64.7 bits (156), Expect(2) = 4e-22 Identities = 31/35 (88%), Positives = 34/35 (97%) Frame = +2 Query: 5 LVEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109 L E+EKLA+ILEDFKMVLVV+NDLKMGKGKIAAQC Sbjct: 47 LDEIEKLADILEDFKMVLVVRNDLKMGKGKIAAQC 81 Score = 64.7 bits (156), Expect(2) = 4e-22 Identities = 30/36 (83%), Positives = 34/36 (94%) Frame = +1 Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216 +KLL RAPKALNRWE CGQVKVVLK+ESE+D+LVLQ Sbjct: 90 KKLLRRAPKALNRWENCGQVKVVLKTESEEDMLVLQ 125 >gb|AEL99152.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene latifolia] Length = 176 Score = 63.9 bits (154), Expect(2) = 3e-21 Identities = 29/34 (85%), Positives = 34/34 (100%) Frame = +2 Query: 8 VEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109 +E+EKLA+I+EDFKMVLVV+NDLKMGKGKIAAQC Sbjct: 51 LEIEKLADIIEDFKMVLVVRNDLKMGKGKIAAQC 84 Score = 62.8 bits (151), Expect(2) = 3e-21 Identities = 28/36 (77%), Positives = 34/36 (94%) Frame = +1 Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216 +KL +RAPKALNRWEMCGQVKVV+K+ESE+D+L LQ Sbjct: 93 KKLQNRAPKALNRWEMCGQVKVVVKTESEEDMLALQ 128 >gb|AEL99151.1| peptidyl-tRNA hydrolase II (PTH2) family protein, partial [Silene latifolia] Length = 176 Score = 63.9 bits (154), Expect(2) = 1e-20 Identities = 29/34 (85%), Positives = 34/34 (100%) Frame = +2 Query: 8 VEVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109 +E+EKLA+I+EDFKMVLVV+NDLKMGKGKIAAQC Sbjct: 51 LEIEKLADIIEDFKMVLVVRNDLKMGKGKIAAQC 84 Score = 60.8 bits (146), Expect(2) = 1e-20 Identities = 27/36 (75%), Positives = 34/36 (94%) Frame = +1 Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216 +KL +RAPKAL+RWEMCGQVKVV+K+ESE+D+L LQ Sbjct: 93 KKLQNRAPKALSRWEMCGQVKVVVKTESEEDMLALQ 128 >ref|XP_002328981.1| predicted protein [Populus trichocarpa] gi|222839215|gb|EEE77566.1| predicted protein [Populus trichocarpa] Length = 186 Score = 63.5 bits (153), Expect(2) = 1e-20 Identities = 29/36 (80%), Positives = 33/36 (91%) Frame = +1 Query: 109 QKLLHRAPKALNRWEMCGQVKVVLKSESEDDLLVLQ 216 +KLLHRAPKALNRWEMC Q KVV+K ESE+D+LVLQ Sbjct: 103 KKLLHRAPKALNRWEMCAQPKVVVKIESEEDMLVLQ 138 Score = 60.8 bits (146), Expect(2) = 1e-20 Identities = 28/33 (84%), Positives = 32/33 (96%) Frame = +2 Query: 11 EVEKLAEILEDFKMVLVVKNDLKMGKGKIAAQC 109 E +KLA+IL+DFKMVLVV+NDLKMGKGKIAAQC Sbjct: 62 ETDKLADILDDFKMVLVVRNDLKMGKGKIAAQC 94