BLASTX nr result

ID: Coptis25_contig00021917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021917
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75530.1| hypothetical protein VITISV_001347 [Vitis vinifera]   197   2e-48
ref|XP_002281612.1| PREDICTED: uncharacterized protein LOC100258...   182   7e-44
ref|XP_002265618.1| PREDICTED: uncharacterized protein LOC100255...   181   3e-43
emb|CAN59756.1| hypothetical protein VITISV_034568 [Vitis vinifera]   179   8e-43
ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|2...   176   9e-42

>emb|CAN75530.1| hypothetical protein VITISV_001347 [Vitis vinifera]
          Length = 730

 Score =  197 bits (502), Expect = 2e-48
 Identities = 114/290 (39%), Positives = 161/290 (55%), Gaps = 27/290 (9%)
 Frame = -2

Query: 791  LQYAYYFFHNFKGIVADHMLNLFHLIKSREVFLMWSTNDAFKVIEIELSFMYEMLYTKAV 612
            ++  Y FF  FKG++ D M +      SR+ F       AF+VIE+EL+FMY+ LYTK V
Sbjct: 231  MESGYKFFKIFKGLIVDLMFSFQERNDSRKFFFGMLPEKAFRVIEVELNFMYDALYTKMV 290

Query: 611  VVHSRVGYVFRFICFIFITIALCDFFFLKKHKFHESDIKITYTLLIGAVSLEATGLFNLI 432
            VV+ ++GY  RFIC   I +AL  F    KHK H+ DI +TY LLIGA+SL+   +  LI
Sbjct: 291  VVNRKIGYFLRFICTGCIAVALQLFSSHHKHKIHKFDIGVTYALLIGAISLDVIAIVKLI 350

Query: 431  FSDWSVIHLTNSQSGVASFIVKYHKLLFD----------GPRWSESVSQLNLISFCLNKR 282
            FSDW+++ L NS +    +  +  KL F             RWS S+SQ  LI +CL +R
Sbjct: 351  FSDWTIVLLKNSTAKERIYYAR-EKLFFCKLWETSKSFLDRRWSNSISQHGLIRYCLRER 409

Query: 281  PVWLEKMVVCLHIKSMLDEFHHKSRKRVTEKLRIRIYEELRAKAESSDLLED-------- 126
              W +K+   L +K +LDE  +K    V E L+  I+EEL+ KA+SS+ LE+        
Sbjct: 410  FKWFDKLADILGLKDLLDEIQYKKTVTVEENLKEFIFEELKEKAKSSEQLEEKAKSAEEK 469

Query: 125  ---------LKNLVPCRGQWVIKNSADYCQVLNWSVEVEFVDSILIWHIA 3
                      K +   RG W++  +A  C  L WSVE E+ + +L+WHIA
Sbjct: 470  ARRAEKSRIAKEICSGRGDWILSQNA--CHSLLWSVEKEYDECLLMWHIA 517


>ref|XP_002281612.1| PREDICTED: uncharacterized protein LOC100258913 [Vitis vinifera]
          Length = 725

 Score =  182 bits (463), Expect = 7e-44
 Identities = 102/291 (35%), Positives = 164/291 (56%), Gaps = 20/291 (6%)
 Frame = -2

Query: 815  DQVTNTKILQYAYYFFHNFKGIVADHMLNLFHLIKSREVFLMWSTNDAFKVIEIELSFMY 636
            +++++  +++  + +F+ FKG++ D M        SR  F   +T DAFKV+E+EL+FMY
Sbjct: 226  ERLSDLDVVEGGFKYFNIFKGLIVDLMFTFQERKDSRRYFFARNTEDAFKVLEVELNFMY 285

Query: 635  EMLYTKAVVVHSRVGYVFRFICFIFITIALCDFFFLKKH----------KFHESDIKITY 486
            + LYTK VVV+  +GY  RF+C   +  +L  F    K           K H  D+ +TY
Sbjct: 286  DALYTKMVVVNGNIGYFLRFVCSTCLVASLERFAAHHKQKNGGHPPNQGKMHPFDVYVTY 345

Query: 485  TLLIGAVSLEATGLFNLIFSDWSVIHLTNSQSGVASFIVKYHKLL----------FDGPR 336
             LLIGA+ L++  +  LIFSDW+++ L   ++    F++K  K L            G R
Sbjct: 346  ALLIGAICLDSIAVIKLIFSDWTIVLLRYRRA--KEFLLKTRKRLTIYRIGSWSKTFGRR 403

Query: 335  WSESVSQLNLISFCLNKRPVWLEKMVVCLHIKSMLDEFHHKSRKRVTEKLRIRIYEELRA 156
            WS S+SQ +L+ +CL +R  W++  V    +K +LDE  +K   +V + L+I I E L+ 
Sbjct: 404  WSNSMSQHSLVRYCLKERFKWIDVTVDWFGLKDILDEIQYKEHIKVPKDLKIFICEALKE 463

Query: 155  KAESSDLLEDLKNLVPCRGQWVIKNSADYCQVLNWSVEVEFVDSILIWHIA 3
            KA+ ++  +  + +   RG WV+  SA  CQ L WSV+ E+ + +L+WHIA
Sbjct: 464  KAKKAEDSKTAREICSGRGDWVLSQSA--CQSLIWSVDGEYDEILLLWHIA 512


>ref|XP_002265618.1| PREDICTED: uncharacterized protein LOC100255511 [Vitis vinifera]
          Length = 714

 Score =  181 bits (458), Expect = 3e-43
 Identities = 103/290 (35%), Positives = 162/290 (55%), Gaps = 20/290 (6%)
 Frame = -2

Query: 812  QVTNTKILQYAYYFFHNFKGIVADHMLNLFHLIKSREVFLMWSTNDAFKVIEIELSFMYE 633
            ++++  +++  + +F+ FKG++ D M        SR      +T DAFKV+E+EL+FMY+
Sbjct: 228  RLSDLDVVEGGFKYFNIFKGLIVDLMFTFQERKDSRRYVFARNTEDAFKVLEVELNFMYD 287

Query: 632  MLYTKAVVVHSRVGYVFRFICFIFITIALCDFFFLKKH----------KFHESDIKITYT 483
             LYTK VVV+  +GY  RF+C   +  +L  F    K           K H  D+ +TY 
Sbjct: 288  ALYTKMVVVNGNIGYCLRFVCSTCLVASLERFAAHHKQKNGGHPPNQAKMHPFDVYVTYA 347

Query: 482  LLIGAVSLEATGLFNLIFSDWSVIHLTNSQSGVASFIVKYHKLL----------FDGPRW 333
            LLIGA+ L++  +  LIFSDW+++ L   ++    F++K  K L            G RW
Sbjct: 348  LLIGAICLDSIAVIKLIFSDWTIVLLRCRRT--KEFLLKTRKRLTIYRIGSWSKTFGGRW 405

Query: 332  SESVSQLNLISFCLNKRPVWLEKMVVCLHIKSMLDEFHHKSRKRVTEKLRIRIYEELRAK 153
            S S+SQ +L+ +CL +R  W++  V  L ++ +LDE  +K    V + L+I I EEL+ K
Sbjct: 406  SNSMSQHSLVRYCLKERFKWIDVTVDWLGLRDILDEIQYKDHIDVPDDLKIFICEELKEK 465

Query: 152  AESSDLLEDLKNLVPCRGQWVIKNSADYCQVLNWSVEVEFVDSILIWHIA 3
            A+ +   +  + +   RG WV+  SA  CQ L WSV+ E+  S+L+WHIA
Sbjct: 466  AKKAKNSKTAREICSGRGDWVLSQSA--CQSLIWSVDGEYDKSLLLWHIA 513


>emb|CAN59756.1| hypothetical protein VITISV_034568 [Vitis vinifera]
          Length = 704

 Score =  179 bits (454), Expect = 8e-43
 Identities = 102/277 (36%), Positives = 156/277 (56%), Gaps = 6/277 (2%)
 Frame = -2

Query: 815  DQVTNTKILQYAYYFFHNFKGIVADHMLNLFHLIKSREVFLMWSTNDAFKVIEIELSFMY 636
            + + +   L  AYYFF+ FK + AD +L+      S+  F   S  +AFKVIEIEL FMY
Sbjct: 241  NSIPDAAXLXDAYYFFNTFKRLFADLILSFQDRRYSQSFFQNTSWEEAFKVIEIELGFMY 300

Query: 635  EMLYTKAVVVHSRVGYVFRFICFIFITIALCDFFFLKKHKFHESDIKITYTLLIGAVSLE 456
            ++LYTKA+V++SR G++ RFI   F   A   F    KH++   D+ IT+ LL+G + LE
Sbjct: 301  DVLYTKAIVIYSRCGFLLRFISLSFTVSACIAFSXFVKHQYSVIDVIITFLLLVGGIILE 360

Query: 455  ATGLFNLIFSDWSVIHLTNSQSGVASFI------VKYHKLLFDGPRWSESVSQLNLISFC 294
               +  L+ SDW+++ L+  ++ +A  I       ++  L     RWS S++Q NLI FC
Sbjct: 361  XYAIIVLLSSDWTMLWLSQHKNPLADLIYXSISCCQFCFLFSSRKRWSNSMAQYNLIGFC 420

Query: 293  LNKRPVWLEKMVVCLHIKSMLDEFHHKSRKRVTEKLRIRIYEELRAKAESSDLLEDLKNL 114
            +  +P+    +    HI  ML+E H+KS   V+  L+  I+E+L  K+ S+  ++  + L
Sbjct: 421  IKDKPIKFLGVQKFFHIYQMLEEHHYKSFTVVSPDLKRLIFEQLLDKSRSASDIKACRQL 480

Query: 113  VPCRGQWVIKNSADYCQVLNWSVEVEFVDSILIWHIA 3
               RG  V+    D      WS+E EF +SIL+WHIA
Sbjct: 481  CAHRGDQVL-GEMDCFAKFGWSIEAEFDESILLWHIA 516


>ref|XP_002333207.1| predicted protein [Populus trichocarpa] gi|222835096|gb|EEE73545.1|
            predicted protein [Populus trichocarpa]
          Length = 729

 Score =  176 bits (445), Expect = 9e-42
 Identities = 106/295 (35%), Positives = 167/295 (56%), Gaps = 31/295 (10%)
 Frame = -2

Query: 797  KILQYAYYFFHNFKGIVADHMLNLFHLIKSREVFLMWSTNDAFKVIEIELSFMYEMLYTK 618
            +++Q AYY+F+ FKG++ D + +     +SR+ F      DA KV+E+EL+F+YE+L+TK
Sbjct: 232  EVVQRAYYYFNIFKGLIVDLIFSFKDRNESRKFFHSIDAEDALKVLEVELNFIYEVLFTK 291

Query: 617  AVVVHSRVGYVFRFICFIFITIALCDFFFLKKHK---FHESDIKITYTLLIGAVSLEATG 447
            AVVVHS +GYVFR + FI + +AL  F F+ K+K   FH  D+K TY LL+G+VSL+   
Sbjct: 292  AVVVHSVIGYVFRLLSFILVLVALALFRFIVKNKKDTFHPLDVKFTYVLLLGSVSLDTIA 351

Query: 446  LFNLIFSDWSVI-------HLTNSQSGVASFIVKYHKLLFDGPR----------WSESVS 318
                IFSDW+V        H  +      +F   +   LF+  R          WSESV 
Sbjct: 352  FVRAIFSDWTVADLNKPGKHPDSCWKSCVAFFSAWKVPLFNVKRAIFKLIGLRSWSESVK 411

Query: 317  QLNLISFCLNKRP-----VWLEKMVVCLHIKSMLDEFHHKSRKRVTEKLRIRIYEELRAK 153
              NL+ +C+N RP     ++++K++  + +K   D     S KR T +L   I++EL+ K
Sbjct: 412  GYNLVRYCVN-RPKGRIGIFMDKVLDFVGLKDFFDGIFRVSNKRFTSELWEVIFDELQKK 470

Query: 152  AESSDLLEDLKNLVPCRGQWVI------KNSADYCQVLNWSVEVEFVDSILIWHI 6
            ++S+D  ED K +   RG   +      KN  +  +++ + V V + +S+L+WHI
Sbjct: 471  SDSADDPEDAKTICSARGNLALQDNDWDKNLKE--KLMPYVVNVTYDESLLLWHI 523


Top