BLASTX nr result

ID: Coptis25_contig00021911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021911
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256...    61   8e-08
ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_002513115.1| conserved hypothetical protein [Ricinus comm...    59   4e-07

>ref|XP_002268521.1| PREDICTED: uncharacterized protein LOC100256905 [Vitis vinifera]
          Length = 133

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = +1

Query: 280 RYSWNDKEKKNRGFVVVTRAGPPSNTSLIFAFVFPLTLLLATIFTSIRIADKLD 441
           R+S     +K RG  VVTRAGP S +S +FAFVFPL+LL  TIFTS+R+ DKL+
Sbjct: 37  RFSGELCRRKTRGLSVVTRAGP-STSSYVFAFVFPLSLLAVTIFTSLRVDDKLE 89


>ref|XP_002297772.1| predicted protein [Populus trichocarpa] gi|222845030|gb|EEE82577.1|
           predicted protein [Populus trichocarpa]
          Length = 162

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/55 (60%), Positives = 40/55 (72%)
 Frame = +1

Query: 280 RYSWNDKEKKNRGFVVVTRAGPPSNTSLIFAFVFPLTLLLATIFTSIRIADKLDE 444
           R S +   +K RG  VVTRAG  +N S + AF+ PL+LL ATIFTSIRIADKLD+
Sbjct: 32  RISDDPWRRKKRGLTVVTRAGLSAN-SYVLAFLLPLSLLAATIFTSIRIADKLDQ 85


>ref|XP_002513115.1| conserved hypothetical protein [Ricinus communis]
           gi|223548126|gb|EEF49618.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 93

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = +1

Query: 304 KKNRGFVVVTRAGPPSNTSLIFAFVFPLTLLLATIFTSIRIADKLD 441
           K  RG  ++ RAGP S +S +FAFVFPL+LL+ TI TSIRIADKLD
Sbjct: 40  KTRRGSALIPRAGP-STSSYVFAFVFPLSLLIGTIITSIRIADKLD 84


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