BLASTX nr result

ID: Coptis25_contig00021900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021900
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519065.1| PREDICTED: uncharacterized protein LOC100783...    55   3e-15
ref|NP_191322.3| exostosin family protein [Arabidopsis thaliana]...    60   1e-14
ref|NP_974452.1| exostosin family protein [Arabidopsis thaliana]...    60   1e-14
emb|CAB41192.1| putative protein [Arabidopsis thaliana]                60   1e-14
ref|XP_002878165.1| exostosin family protein [Arabidopsis lyrata...    60   2e-14

>ref|XP_003519065.1| PREDICTED: uncharacterized protein LOC100783624 [Glycine max]
          Length = 795

 Score = 55.5 bits (132), Expect(3) = 3e-15
 Identities = 22/45 (48%), Positives = 31/45 (68%)
 Frame = -2

Query: 382 YIYENWDGIPSTRSGSHPCLDSEKELVLFAWKLPDPGSLRLRVWS 248
           Y  +NWD I S + G+HPC D +K+LVL AWK+PD   L  ++W+
Sbjct: 519 YWADNWDKISSDKRGTHPCFDPDKDLVLPAWKVPDANVLTSKLWA 563



 Score = 48.9 bits (115), Expect(3) = 3e-15
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -1

Query: 215 WSHKERKKLFYYNGNLGPAYENGRQKAMY 129
           WSH++RK LFY+NGNLGPAY +GR +  Y
Sbjct: 564 WSHEKRKTLFYFNGNLGPAYPHGRPEDTY 592



 Score = 21.9 bits (45), Expect(3) = 3e-15
 Identities = 10/13 (76%), Positives = 11/13 (84%)
 Frame = -2

Query: 40  YSI*ISQKLAEEF 2
           YS+ I QKLAEEF
Sbjct: 592 YSMGIRQKLAEEF 604


>ref|NP_191322.3| exostosin family protein [Arabidopsis thaliana]
           gi|44917463|gb|AAS49056.1| At3g57630 [Arabidopsis
           thaliana] gi|46931284|gb|AAT06446.1| At3g57630
           [Arabidopsis thaliana] gi|332646159|gb|AEE79680.1|
           exostosin family protein [Arabidopsis thaliana]
          Length = 793

 Score = 60.1 bits (144), Expect(3) = 1e-14
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 382 YIYENWDGIPSTRSGSHPCLDSEKELVLFAWKLPDPGSLRLRVWSR 245
           Y  +NWD I   R G HPC D  K+LV+ AWK+PDP S+R   W R
Sbjct: 515 YFGDNWDDISDERRGDHPCFDPRKDLVIPAWKVPDPYSMRKNYWER 560



 Score = 42.0 bits (97), Expect(3) = 1e-14
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -1

Query: 206 KERKKLFYYNGNLGPAYENGRQKAMY 129
           ++RK LFY+NGNLGPAYE GR +  Y
Sbjct: 563 EKRKTLFYFNGNLGPAYEKGRPEDSY 588



 Score = 22.3 bits (46), Expect(3) = 1e-14
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 43  NYSI*ISQKLAEEF 2
           +YS+ I QKLAEEF
Sbjct: 587 SYSMGIRQKLAEEF 600


>ref|NP_974452.1| exostosin family protein [Arabidopsis thaliana]
           gi|110740929|dbj|BAE98560.1| hypothetical protein
           [Arabidopsis thaliana] gi|332646160|gb|AEE79681.1|
           exostosin family protein [Arabidopsis thaliana]
          Length = 791

 Score = 60.1 bits (144), Expect(3) = 1e-14
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 382 YIYENWDGIPSTRSGSHPCLDSEKELVLFAWKLPDPGSLRLRVWSR 245
           Y  +NWD I   R G HPC D  K+LV+ AWK+PDP S+R   W R
Sbjct: 513 YFGDNWDDISDERRGDHPCFDPRKDLVIPAWKVPDPYSMRKNYWER 558



 Score = 42.0 bits (97), Expect(3) = 1e-14
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -1

Query: 206 KERKKLFYYNGNLGPAYENGRQKAMY 129
           ++RK LFY+NGNLGPAYE GR +  Y
Sbjct: 561 EKRKTLFYFNGNLGPAYEKGRPEDSY 586



 Score = 22.3 bits (46), Expect(3) = 1e-14
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 43  NYSI*ISQKLAEEF 2
           +YS+ I QKLAEEF
Sbjct: 585 SYSMGIRQKLAEEF 598


>emb|CAB41192.1| putative protein [Arabidopsis thaliana]
          Length = 736

 Score = 60.1 bits (144), Expect(3) = 1e-14
 Identities = 24/46 (52%), Positives = 29/46 (63%)
 Frame = -2

Query: 382 YIYENWDGIPSTRSGSHPCLDSEKELVLFAWKLPDPGSLRLRVWSR 245
           Y  +NWD I   R G HPC D  K+LV+ AWK+PDP S+R   W R
Sbjct: 491 YFGDNWDDISDERRGDHPCFDPRKDLVIPAWKVPDPYSMRKNYWER 536



 Score = 42.0 bits (97), Expect(3) = 1e-14
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -1

Query: 206 KERKKLFYYNGNLGPAYENGRQKAMY 129
           ++RK LFY+NGNLGPAYE GR +  Y
Sbjct: 539 EKRKTLFYFNGNLGPAYEKGRPEDSY 564



 Score = 22.3 bits (46), Expect(3) = 1e-14
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 43  NYSI*ISQKLAEEF 2
           +YS+ I QKLAEEF
Sbjct: 563 SYSMGIRQKLAEEF 576


>ref|XP_002878165.1| exostosin family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324003|gb|EFH54424.1| exostosin family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 792

 Score = 59.7 bits (143), Expect(3) = 2e-14
 Identities = 24/46 (52%), Positives = 30/46 (65%)
 Frame = -2

Query: 382 YIYENWDGIPSTRSGSHPCLDSEKELVLFAWKLPDPGSLRLRVWSR 245
           Y  +NWD I   R G HPC D  K+LV+ AWK+PDP S+R   W+R
Sbjct: 514 YWGDNWDDISDERRGDHPCFDPRKDLVIPAWKVPDPYSMRANYWAR 559



 Score = 42.0 bits (97), Expect(3) = 2e-14
 Identities = 17/26 (65%), Positives = 21/26 (80%)
 Frame = -1

Query: 206 KERKKLFYYNGNLGPAYENGRQKAMY 129
           ++RK LFY+NGNLGPAYE GR +  Y
Sbjct: 562 EKRKTLFYFNGNLGPAYEKGRPEDSY 587



 Score = 22.3 bits (46), Expect(3) = 2e-14
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = -2

Query: 43  NYSI*ISQKLAEEF 2
           +YS+ I QKLAEEF
Sbjct: 586 SYSMGIRQKLAEEF 599


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