BLASTX nr result

ID: Coptis25_contig00021889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021889
         (931 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515247.1| conserved hypothetical protein [Ricinus comm...    71   1e-18
ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267...    62   3e-18
emb|CBI36974.3| unnamed protein product [Vitis vinifera]               67   8e-17
emb|CAN64720.1| hypothetical protein VITISV_026721 [Vitis vinifera]    74   4e-16
emb|CBI39610.3| unnamed protein product [Vitis vinifera]               74   5e-16

>ref|XP_002515247.1| conserved hypothetical protein [Ricinus communis]
           gi|223545727|gb|EEF47231.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 70.9 bits (172), Expect(2) = 1e-18
 Identities = 53/161 (32%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
 Frame = -2

Query: 930 EEGNVESVITGARQKKKYLGRVWSGVINVDGLIKD-EYGVRASNSVLNFSEKS----SGS 766
           EE  +  +I+  +Q +K L  VWSG +  DGL+   ++G  A+ +V     K+     G 
Sbjct: 36  EEDGLHDLISTNKQSEKLLNSVWSGRLGFDGLVNSSKFGDIANENVELLLGKNIEGKEGQ 95

Query: 765 EENVGLMXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDAADQKLVREISELAMLKRARVER 586
           ++N+G                             SLDAADQKLV+EI+ELAM KRAR+ER
Sbjct: 96  QQNMGFGNKKVVEDKHKKKNSRKAPKPPRPPKGPSLDAADQKLVQEITELAMRKRARMER 155

Query: 585 XXXXXXXXXXXALXXXXXXXXXSLCALVVTVLFCLVILFQG 463
                                 S+ A+++T LFCLV++FQG
Sbjct: 156 IKALKKMR-----AAKSSSWNSSVYAMIITFLFCLVLIFQG 191



 Score = 49.3 bits (116), Expect(2) = 1e-18
 Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 398 GLFSRSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINPSSESPNLAE-QISRS 231
           G+ ++S+     +GSPE A A    LIS+Q+YKNPA G   P S SP+L+E Q+S S
Sbjct: 191 GICAKSSRSMFLQGSPEPAVAASEDLISIQFYKNPAFGIDGPGSGSPSLSEGQVSGS 247


>ref|XP_002273418.1| PREDICTED: uncharacterized protein LOC100267130 [Vitis vinifera]
           gi|296083220|emb|CBI22856.3| unnamed protein product
           [Vitis vinifera]
          Length = 223

 Score = 62.0 bits (149), Expect(2) = 3e-18
 Identities = 39/66 (59%), Positives = 42/66 (63%)
 Frame = -2

Query: 660 LDAADQKLVREISELAMLKRARVERXXXXXXXXXXXALXXXXXXXXXSLCALVVTVLFCL 481
           LDAADQKLVREI+ELAMLKRARVER            +         SL A+V TV FCL
Sbjct: 97  LDAADQKLVREIAELAMLKRARVER------RKALRKMKVAKASSNSSLFAMVFTVFFCL 150

Query: 480 VILFQG 463
           VILFQG
Sbjct: 151 VILFQG 156



 Score = 56.6 bits (135), Expect(2) = 3e-18
 Identities = 31/68 (45%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
 Frame = -3

Query: 398 GLFSRSNSHASFEGSPESARATRGPLISVQYYKNPAAGNINP-SSESPNLAEQISRSDPQ 222
           GL SR NS  +F GSPESA  T G LISVQYY + +  ++    SESP+L EQ+   + +
Sbjct: 156 GLSSRRNSAITFHGSPESAAPTEGGLISVQYYHSISPSDVKEHGSESPSLVEQLPGLEAK 215

Query: 221 EENSRVAG 198
           E+  +  G
Sbjct: 216 EKAGKAPG 223


>emb|CBI36974.3| unnamed protein product [Vitis vinifera]
          Length = 255

 Score = 66.6 bits (161), Expect(2) = 8e-17
 Identities = 54/170 (31%), Positives = 68/170 (40%), Gaps = 14/170 (8%)
 Frame = -2

Query: 930 EEGNVESVITGARQKKKYLGRVWSGVINVDGLIKDEYGVRASNSVLNF------------ 787
           EE      + G  Q  K   RV S V N DG +KDE GV    +++ +            
Sbjct: 24  EEDGGRDPVLGNIQANKLFSRVGSEVWNFDGSVKDENGVNLIKNLVKYGNTADVNVELLI 83

Query: 786 --SEKSSGSEENVGLMXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDAADQKLVREISELA 613
             S +   S EN  L                             LDAADQK VREISELA
Sbjct: 84  DISSRGEESRENSNLAMKQYVNEKHKKTNSRKPPKPPRPPQGPLLDAADQKFVREISELA 143

Query: 612 MLKRARVERXXXXXXXXXXXALXXXXXXXXXSLCALVVTVLFCLVILFQG 463
           M +RAR+ER                      SL A+++T LF ++ILFQG
Sbjct: 144 MRRRARIER----IKEMKKKKAAKASSMSSSSLSAMIITFLFFIIILFQG 189



 Score = 47.0 bits (110), Expect(2) = 8e-17
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
 Frame = -3

Query: 398 GLFSRSNSHASFEGSPESARATRGPLISVQYYKN-PAAGNINPSSESPNLAEQ 243
           G+ SR++SH  F+GSPE    +R  LISVQYYKN P   +  P S S +  EQ
Sbjct: 189 GICSRASSHEGFQGSPEPVVNSRKSLISVQYYKNLPPNESNEPGSNSLDSVEQ 241


>emb|CAN64720.1| hypothetical protein VITISV_026721 [Vitis vinifera]
          Length = 252

 Score = 74.3 bits (181), Expect(2) = 4e-16
 Identities = 52/165 (31%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
 Frame = -2

Query: 930 EEGNVESVITGARQKKKYLGRVWSGVINVDGLIKDEYGVRASNSVLNFSEKSSGS----- 766
           EEG      +G    KK LGR WSG++  DG I+    V    S LN+      S     
Sbjct: 24  EEGGRNPSSSGGIPTKKTLGRAWSGIVGFDGCIRSADSVSICKSELNYGGACGNSVDSLV 83

Query: 765 ----EENVGLMXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDAADQKLVREISELAMLKRA 598
               EE +  +                           SLDAAD K+VREI+ELAM+KRA
Sbjct: 84  GGLGEEQMEFVGKKMNKEKRKKIGSKKPSKPPRAPRGPSLDAADMKMVREITELAMMKRA 143

Query: 597 RVERXXXXXXXXXXXALXXXXXXXXXSLCALVVTVLFCLVILFQG 463
           RVER                      +  A+++T+LFC +++FQG
Sbjct: 144 RVER-----MKALKMKTEKASSLSCSNFIAMIITILFCFILIFQG 183



 Score = 37.0 bits (84), Expect(2) = 4e-16
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -3

Query: 398 GLFSRSNS-HASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSESPNLAEQISRSDP 225
           G+ SRS+S + SF GSPE+  A  G +IS+++  NP A   N P S  P+ AE  S    
Sbjct: 183 GICSRSSSSNMSFHGSPET--AGDGGMISIEHSMNPPATETNGPGSGFPSYAESASLQQA 240

Query: 224 QEENSR 207
             ++ R
Sbjct: 241 ALQDGR 246


>emb|CBI39610.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score = 73.9 bits (180), Expect(2) = 5e-16
 Identities = 52/165 (31%), Positives = 70/165 (42%), Gaps = 9/165 (5%)
 Frame = -2

Query: 930 EEGNVESVITGARQKKKYLGRVWSGVINVDGLIKDEYGVRASNSVLNFSEKSSGS----- 766
           EEG      +G    KK LGR WSG++  DG I+    V    S LN+      S     
Sbjct: 24  EEGGRNPWSSGGIPAKKTLGRAWSGIVGFDGCIRSADSVSICKSELNYGGACGNSVDSLV 83

Query: 765 ----EENVGLMXXXXXXXXXXXXXXXXXXXXXXXXXXXSLDAADQKLVREISELAMLKRA 598
               EE +  +                           SLDAAD K+VREI+ELAM+KRA
Sbjct: 84  GGLGEEQMEFVGKKMNKEKRKKIGSKKPSKPPRAPRGPSLDAADMKMVREITELAMMKRA 143

Query: 597 RVERXXXXXXXXXXXALXXXXXXXXXSLCALVVTVLFCLVILFQG 463
           RVER                      +  A+++T+LFC +++FQG
Sbjct: 144 RVER-----MKALKMKTEKASSLSCSNFIAMIITILFCFILIFQG 183



 Score = 37.0 bits (84), Expect(2) = 5e-16
 Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
 Frame = -3

Query: 398 GLFSRSNS-HASFEGSPESARATRGPLISVQYYKNPAAGNIN-PSSESPNLAEQISRSDP 225
           G+ SRS+S + SF GSPE+  A  G +IS+++  NP A   N P S  P+ AE  S    
Sbjct: 183 GICSRSSSSNMSFHGSPET--AGDGGMISIEHSMNPPATETNGPGSGFPSYAESASLQQA 240

Query: 224 QEENSR 207
             ++ R
Sbjct: 241 ALQDGR 246


Top