BLASTX nr result
ID: Coptis25_contig00021887
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021887 (488 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN60839.1| hypothetical protein VITISV_038562 [Vitis vinifera] 98 8e-19 ref|XP_002276796.2| PREDICTED: protein TIC110, chloroplastic-lik... 96 2e-18 ref|XP_002517728.1| conserved hypothetical protein [Ricinus comm... 84 1e-14 gb|AER92593.1| hypothetical protein [Linum usitatissimum] 80 2e-13 ref|XP_002326080.1| predicted protein [Populus trichocarpa] gi|2... 80 2e-13 >emb|CAN60839.1| hypothetical protein VITISV_038562 [Vitis vinifera] Length = 1061 Score = 97.8 bits (242), Expect = 8e-19 Identities = 63/153 (41%), Positives = 81/153 (52%) Frame = -1 Query: 461 MNLSLQITSPTSTPHPLLFPHFINPSLHRIKISNPKNRNFRYRLSITRXXXXXXXXXXXX 282 MN SL +T+P + H F+NP+ R ++ R RYR+S+ R Sbjct: 1 MNPSL-LTAPPPSQHS---SPFLNPTPFRFSTTSLTRRR-RYRISLIRNSSTPPDPLTSS 55 Query: 281 XXXXXXNVFGGKKELSGIQILVDSLSPSIRLXXXXXXXXXXXXXGYGLGFKFGGNRNTXX 102 +VFGG++ELSGIQ LVDSLSP +RL GYGLGF+FG +RNT Sbjct: 56 PPSVTSDVFGGRRELSGIQPLVDSLSPPLRLVSSALIVAGAIAAGYGLGFRFGKSRNTAL 115 Query: 101 XXXXXXXXXXXXAVYGMNSCVPDVAAVNLHNYV 3 A Y +N+CVP+VAAVNLHNYV Sbjct: 116 GGAVAIGAAGGAAAYALNACVPEVAAVNLHNYV 148 >ref|XP_002276796.2| PREDICTED: protein TIC110, chloroplastic-like [Vitis vinifera] gi|297745792|emb|CBI15848.3| unnamed protein product [Vitis vinifera] Length = 1007 Score = 96.3 bits (238), Expect = 2e-18 Identities = 62/153 (40%), Positives = 80/153 (52%) Frame = -1 Query: 461 MNLSLQITSPTSTPHPLLFPHFINPSLHRIKISNPKNRNFRYRLSITRXXXXXXXXXXXX 282 MN SL +T+P + H F+NP+ R ++ R RYR+S+ R Sbjct: 1 MNPSL-LTAPPPSQHS---SPFLNPTPFRFSTTSLTRRR-RYRISLIRSSSTPPDPLTSS 55 Query: 281 XXXXXXNVFGGKKELSGIQILVDSLSPSIRLXXXXXXXXXXXXXGYGLGFKFGGNRNTXX 102 +VFGG++ELSGIQ LVDSLSP +RL GYGLGF+FG +RNT Sbjct: 56 PPSVTSDVFGGRRELSGIQPLVDSLSPPLRLVSSALIVAGAIAAGYGLGFRFGKSRNTAL 115 Query: 101 XXXXXXXXXXXXAVYGMNSCVPDVAAVNLHNYV 3 A Y +N+CVP+VAA NLHNYV Sbjct: 116 GGAVAIGAAGGAAAYALNACVPEVAAANLHNYV 148 >ref|XP_002517728.1| conserved hypothetical protein [Ricinus communis] gi|223543126|gb|EEF44660.1| conserved hypothetical protein [Ricinus communis] Length = 1019 Score = 84.0 bits (206), Expect = 1e-14 Identities = 59/156 (37%), Positives = 77/156 (49%), Gaps = 3/156 (1%) Frame = -1 Query: 461 MNLSLQITSPTSTPHPLLFPHFINPSLHRIKI-SNPKNRNFRYRL--SITRXXXXXXXXX 291 MN SL ++ +S P L P F++PS R+ S+ K R FR + + + Sbjct: 1 MNPSLVTSTASSLASPFLSP-FLSPSPLRLSTPSSLKRRRFRVYIPRNSSSDAAVDDSTT 59 Query: 290 XXXXXXXXXNVFGGKKELSGIQILVDSLSPSIRLXXXXXXXXXXXXXGYGLGFKFGGNRN 111 N+FGGKKEL+G+Q LV +LSP +RL GYGLG KFG RN Sbjct: 60 TATTTTTNENIFGGKKELTGLQPLVANLSPPVRLASSAIIIAGAVAAGYGLGLKFGKTRN 119 Query: 110 TXXXXXXXXXXXXXXAVYGMNSCVPDVAAVNLHNYV 3 VY +NSCVP+VAA +LHNYV Sbjct: 120 LALGGAAAAGAAGGAFVYAINSCVPEVAAADLHNYV 155 >gb|AER92593.1| hypothetical protein [Linum usitatissimum] Length = 180 Score = 79.7 bits (195), Expect = 2e-13 Identities = 42/86 (48%), Positives = 50/86 (58%) Frame = -1 Query: 260 VFGGKKELSGIQILVDSLSPSIRLXXXXXXXXXXXXXGYGLGFKFGGNRNTXXXXXXXXX 81 VFGG+KEL+GIQ LVDSL P +RL GYGLG +FGG RN Sbjct: 73 VFGGRKELTGIQPLVDSLPPPVRLTCSAVILAGAVAAGYGLGQRFGGTRNLAIGGAAAMG 132 Query: 80 XXXXXAVYGMNSCVPDVAAVNLHNYV 3 VY +N+CVP+VAA +LHNYV Sbjct: 133 AAGGAMVYALNACVPEVAAASLHNYV 158 >ref|XP_002326080.1| predicted protein [Populus trichocarpa] gi|222862955|gb|EEF00462.1| predicted protein [Populus trichocarpa] Length = 1013 Score = 79.7 bits (195), Expect = 2e-13 Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 6/159 (3%) Frame = -1 Query: 461 MNLSLQITSPTS---TPHPL-LFPHFIN-PSLHRIKISNPKNRNFRYRLSITRXXXXXXX 297 MN SL +SP++ +P PL L P + P HR +S P++ ++T Sbjct: 1 MNPSLLASSPSTPFLSPIPLKLTPSSLTLPKRHRFLVSFPRSSAAETPSTVT-------- 52 Query: 296 XXXXXXXXXXXNVFGGKKELSGIQILVDSLSPSIRLXXXXXXXXXXXXXGYGLGFKF-GG 120 NVFGGK+EL+GIQ +V +LSP++RL GYGLG KF GG Sbjct: 53 -----LESKPDNVFGGKRELTGIQPIVSNLSPTLRLASSAIILAGALAAGYGLGTKFGGG 107 Query: 119 NRNTXXXXXXXXXXXXXXAVYGMNSCVPDVAAVNLHNYV 3 +RN VY +NS VP+VAA+NLHNYV Sbjct: 108 SRNLALGGAAVAGAAGGAVVYALNSAVPEVAAINLHNYV 146