BLASTX nr result

ID: Coptis25_contig00021866 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021866
         (1841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|2...   553   e-155
ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane pro...   542   e-151
ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane pro...   541   e-151
ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane pro...   537   e-150

>ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|222855008|gb|EEE92555.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  556 bits (1432), Expect = e-156
 Identities = 281/443 (63%), Positives = 335/443 (75%), Gaps = 15/443 (3%)
 Frame = -1

Query: 1691 MSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSL-VTKRRRFSGVIVNASH------R 1533
            M+TS+VLC N     + N  P +  +    +S  SL ++ RRRF GV   A        +
Sbjct: 1    MTTSIVLCNNLSFNTNHNQTPLRNRNLFAKSSSFSLQLSNRRRFCGVFPKAKKNGKNHSK 60

Query: 1532 RKRAWWKEFFLDEDGNWFGLKXXXXXXXXXXXXXXXXXDGLSEEERFEAWKRRAEAISEL 1353
            RKR WW+ FF DEDGNWFGLK                 + LSEEE+FEAWKRRAEAI EL
Sbjct: 61   RKRNWWRRFFFDEDGNWFGLKDDDLLDAEADFSENSSDEELSEEEKFEAWKRRAEAIVEL 120

Query: 1352 REAQEDVRNAENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSG--------DVRADPS 1197
            REAQED+ N ++R+WEDW+V+        +S G  W+   D + G        D R+DP+
Sbjct: 121  REAQEDMLNEDSRRWEDWIVDYGDNGHDDASNGSWWSQEFDGNGGIGNGGSVEDARSDPT 180

Query: 1196 EMMFGEGLVEEIRALVLGKKEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYV 1017
            +++  +G VE +R LVLG++E +  YE+RVF YAS NSAKFLA+L+IIPW LDF VHDYV
Sbjct: 181  DLVPEKGFVESVRDLVLGREEEDLLYEDRVFRYASLNSAKFLAVLIIIPWALDFAVHDYV 240

Query: 1016 LMPFLDRYVKTVPLAAEFFDVRRNQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLE 837
            LMPFLDRYVKTVPLAA+  DVR++QKLEM+  +KVE+AR   E EIGKSPPLSDEE W E
Sbjct: 241  LMPFLDRYVKTVPLAAQMLDVRKSQKLEMIKELKVEKARLLLEVEIGKSPPLSDEEEWWE 300

Query: 836  LRHKALELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSD 657
            LRHKALELRD+WRLENRR+FANI SDMVFGI++FILLYFNQ+KVALLKFTGYKI+NNV+D
Sbjct: 301  LRHKALELRDDWRLENRRSFANIWSDMVFGISIFILLYFNQSKVALLKFTGYKILNNVTD 360

Query: 656  TGKAFLIILITDIFLGYHSESGWQTLVELIVEHYGLEVDQAAMTIFVCTVPVVMDACVKL 477
             GKAFLIILITDIFLGYHSESGWQTL+++IVEHYGLEVDQ+A+TIF+C VPVV+DACVKL
Sbjct: 361  IGKAFLIILITDIFLGYHSESGWQTLLDVIVEHYGLEVDQSAITIFICLVPVVIDACVKL 420

Query: 476  WLFKYLPRLSPRVTNIFREMTRH 408
            WLFKYLPRLSPRV NIFREM RH
Sbjct: 421  WLFKYLPRLSPRVANIFREMKRH 443


>ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|222873606|gb|EEF10737.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  553 bits (1426), Expect = e-155
 Identities = 278/440 (63%), Positives = 329/440 (74%), Gaps = 16/440 (3%)
 Frame = -1

Query: 1679 LVLCQN--FVTTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNASHR------RKR 1524
            +VLC N  F T    N P  +    +    L+    K R F GV+ NA  +      RKR
Sbjct: 1    MVLCNNLSFNTNQSQNPPRNRNSLTKSYRLLLQFGNKSRGFCGVVANAKKKGENHSKRKR 60

Query: 1523 AWWKEFFLDEDGNWFGLKXXXXXXXXXXXXXXXXXDGLSEEERFEAWKRRAEAISELREA 1344
             WW+ FF+DE+GNW GLK                 + LSEEE+FEAWKRRAEAI +LREA
Sbjct: 61   GWWQRFFIDEEGNWLGLKDDDMLDAEAELSENSSDEELSEEEKFEAWKRRAEAIVDLREA 120

Query: 1343 QEDVRNAENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSG--------DVRADPSEMM 1188
            QED+ N E+RKWEDW+V+         S G  W+   D + G        DVR+DP++++
Sbjct: 121  QEDMLNEESRKWEDWIVDYGDNGHDDDSNGSWWSKEYDGNGGIGNGGSVEDVRSDPTDLV 180

Query: 1187 FGEGLVEEIRALVLGKKEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMP 1008
              +G VE +R LV G++E +  YE+RVF YAS NSAKFLA+L+IIPW LDF VHDYVLMP
Sbjct: 181  REKGFVESVRDLVFGREEEDLLYEDRVFRYASLNSAKFLAVLIIIPWALDFAVHDYVLMP 240

Query: 1007 FLDRYVKTVPLAAEFFDVRRNQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRH 828
            FLDRYVKTVPLAA+  DVR+NQKLEM+  IK+E+AR + E EIGKSPPLSDEE W ELRH
Sbjct: 241  FLDRYVKTVPLAAQMLDVRKNQKLEMIKEIKLEKARLKLEVEIGKSPPLSDEEEWRELRH 300

Query: 827  KALELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGK 648
            KALELRDEWRLENRR+FANI SDMVFG+++F+LLYFNQ+KVALLKFTGYKI+NNVSDTGK
Sbjct: 301  KALELRDEWRLENRRSFANIWSDMVFGVSIFVLLYFNQSKVALLKFTGYKILNNVSDTGK 360

Query: 647  AFLIILITDIFLGYHSESGWQTLVELIVEHYGLEVDQAAMTIFVCTVPVVMDACVKLWLF 468
            AFLIILITDIFLGYHSESGWQTL+E+I EHYGLEVDQ+A+TIF+C VPVV+DACVKLWLF
Sbjct: 361  AFLIILITDIFLGYHSESGWQTLLEVIFEHYGLEVDQSAITIFICLVPVVIDACVKLWLF 420

Query: 467  KYLPRLSPRVTNIFREMTRH 408
            KYLPRLSP+V NIFREM RH
Sbjct: 421  KYLPRLSPKVANIFREMKRH 440


>ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane protein [Vitis vinifera]
            gi|297736012|emb|CBI24050.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  542 bits (1396), Expect = e-151
 Identities = 279/428 (65%), Positives = 329/428 (76%), Gaps = 4/428 (0%)
 Frame = -1

Query: 1679 LVLCQNFV----TTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNASHRRKRAWWK 1512
            +VLC+N +    +++  +     LP    ST      T+RRR  G++   S R +R+WW+
Sbjct: 1    MVLCENLIFIRRSSFHSHTHGLSLPQFTDSTR----GTRRRRPLGLV--HSTRPRRSWWQ 54

Query: 1511 EFFLDEDGNWFGLKXXXXXXXXXXXXXXXXXDGLSEEERFEAWKRRAEAISELREAQEDV 1332
            +FF D+DGNW GLK                   LSE ++FEAWKRRAEAI ELREAQED+
Sbjct: 55   KFF-DDDGNWLGLKDGDMVDLEESSSEEED---LSETQKFEAWKRRAEAILELREAQEDI 110

Query: 1331 RNAENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSGDVRADPSEMMFGEGLVEEIRAL 1152
            RN E R+WEDWLVEG  +    S W      G +   G    D   ++  +G VE +R L
Sbjct: 111  RNQEGRRWEDWLVEGSTDSHSDSDWVAGSHTGDEGGDG---GDLGGIIPDKGFVESVRDL 167

Query: 1151 VLGKKEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFLDRYVKTVPLA 972
            VLG+++ E  YE+RVF YAS NSAKFLA+L+IIPW LDFVVHDYVLMPFLDRYVKTVPLA
Sbjct: 168  VLGREDDELLYEDRVFRYASFNSAKFLAVLLIIPWALDFVVHDYVLMPFLDRYVKTVPLA 227

Query: 971  AEFFDVRRNQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLE 792
            A+  DVRR+QKLEMV  +K+ERARFR E EIGKSPPLSD+EVWLELRHKALELRDEWRLE
Sbjct: 228  AKMLDVRRHQKLEMVKELKIERARFRLEVEIGKSPPLSDDEVWLELRHKALELRDEWRLE 287

Query: 791  NRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILITDIFL 612
            NRRAFANI SDMVFGI++F LLYFNQ++VALLKFTGYKIINN+SDTGKAFLIILITDIFL
Sbjct: 288  NRRAFANIWSDMVFGISLFFLLYFNQSQVALLKFTGYKIINNISDTGKAFLIILITDIFL 347

Query: 611  GYHSESGWQTLVELIVEHYGLEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTN 432
            GYHSESGWQTL+E++VEHYGLEVDQ+A+TIFVC +PVV+DACVKLWLFK+LPRLSPRV+N
Sbjct: 348  GYHSESGWQTLLEVVVEHYGLEVDQSAITIFVCLIPVVIDACVKLWLFKFLPRLSPRVSN 407

Query: 431  IFREMTRH 408
            IFREM RH
Sbjct: 408  IFREMKRH 415


>ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  541 bits (1393), Expect = e-151
 Identities = 271/438 (61%), Positives = 334/438 (76%), Gaps = 7/438 (1%)
 Frame = -1

Query: 1700 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLVSLVTKRRRFSGVIVNAS----HR 1533
            M LMS+S+VLC N +  ++  L  K   S   S  ++ L +K RR +G I  A     H 
Sbjct: 1    MILMSSSIVLCDNLIL-FNQKLLLKSFVSRGSSNFVIQLSSKTRRLNGFISKAEKHSGHS 59

Query: 1532 RKRAWWKEFFLDEDGNWFGLKXXXXXXXXXXXXXXXXXDG-LSEEERFEAWKRRAEAISE 1356
            RK +WW++FF ++DGNW GL+                    LSE ++FEAWK+RAEAI E
Sbjct: 60   RKSSWWQKFFFEDDGNWLGLRDDDMVEAEAEAEGEGESTQELSEGDKFEAWKQRAEAIVE 119

Query: 1355 LREAQEDVRNAENRKWEDWLVEGPLE--EVGSSSWGQDWADGMDESSGDVRADPSEMMFG 1182
            LREAQED RN   RKWEDWL++G     E  +SSW Q+  D  +    +VRAD  ++   
Sbjct: 120  LREAQEDGRNQAYRKWEDWLLDGDGTNGEDNTSSWEQEMRDYRE----NVRADSGDVPAE 175

Query: 1181 EGLVEEIRALVLGKKEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFL 1002
            +G+VE  R L+ G+++ +  YE+RVF YASSNSAKFLA+L+I+PW +DF+VHDY+LMPFL
Sbjct: 176  KGIVESARYLIFGREDDDMLYEDRVFQYASSNSAKFLAVLIIVPWAMDFLVHDYILMPFL 235

Query: 1001 DRYVKTVPLAAEFFDVRRNQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKA 822
            DRYVKTVPLAA+  DVRR QKL+++  ++ ER RF  E EIGKSPPLSD+EVW ELRHKA
Sbjct: 236  DRYVKTVPLAAQMLDVRRYQKLQIIEELRTERGRFELEVEIGKSPPLSDDEVWWELRHKA 295

Query: 821  LELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAF 642
            LELR+EWRLENRRAFANI SD V+GI++FI+LYFN++KVALLKFTGYKIINN+SDTGKAF
Sbjct: 296  LELREEWRLENRRAFANIWSDTVYGISLFIILYFNKSKVALLKFTGYKIINNISDTGKAF 355

Query: 641  LIILITDIFLGYHSESGWQTLVELIVEHYGLEVDQAAMTIFVCTVPVVMDACVKLWLFKY 462
            LIILITDIFLGYHSESGWQTL+E+IVEHYGLEVDQ+A+TIF+C +PVV+DACVKLWLFK+
Sbjct: 356  LIILITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLIPVVIDACVKLWLFKF 415

Query: 461  LPRLSPRVTNIFREMTRH 408
            LPRLSPRVTNIFREM RH
Sbjct: 416  LPRLSPRVTNIFREMKRH 433


>ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  537 bits (1384), Expect = e-150
 Identities = 268/434 (61%), Positives = 329/434 (75%), Gaps = 3/434 (0%)
 Frame = -1

Query: 1700 MFLMSTSLVLCQNFVTTYDPNLPPKKLPSCRISTSLV-SLVTKRRRFSGVIVNAS-HRRK 1527
            M LMS+S+VLC   +  ++  L  K   S   S++ V    +K RR +G I  A  H RK
Sbjct: 1    MILMSSSIVLCDKNLILFNQKLLLKSFVSHGSSSNFVIQFGSKTRRLNGFISKAEKHSRK 60

Query: 1526 RAWWKEFFLDEDGNWFGLKXXXXXXXXXXXXXXXXXDG-LSEEERFEAWKRRAEAISELR 1350
             +WW+ FF ++DGNW GL+                    LSE ++FEAWKRRAEAI ELR
Sbjct: 61   SSWWQNFFFNDDGNWLGLRDDDMAEAEAEAEGEGERTQELSEGDKFEAWKRRAEAIVELR 120

Query: 1349 EAQEDVRNAENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSGDVRADPSEMMFGEGLV 1170
            EAQED RN + RKWEDWL++G  +  G  +    W  GM +   +VRAD  ++   +G V
Sbjct: 121  EAQEDRRNQDYRKWEDWLLDGDGDGNGKDNTSS-WEQGMKDYRENVRADSGDVPVEKGFV 179

Query: 1169 EEIRALVLGKKEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFLDRYV 990
            E  R L+ G+++ +  YE+RVF YASSNSAKFLA+L+I+PW +DF+VHDY+LMPFLDRYV
Sbjct: 180  ESARYLIFGREDDDMLYEDRVFQYASSNSAKFLAVLIIVPWAMDFLVHDYILMPFLDRYV 239

Query: 989  KTVPLAAEFFDVRRNQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKALELR 810
            KTVPLAA+  DVRR QKL+++  ++ ER RF  E EIGKSPPLSD+EVW ELRH+ALELR
Sbjct: 240  KTVPLAAQMLDVRRYQKLQIIEELRTERGRFELEVEIGKSPPLSDDEVWWELRHRALELR 299

Query: 809  DEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIIL 630
            +EWRLENRRAFANI SD V+GI++FILLYFN++KVALLKFTGYKIINN+SDTGKAFLIIL
Sbjct: 300  EEWRLENRRAFANIWSDTVYGISLFILLYFNKSKVALLKFTGYKIINNISDTGKAFLIIL 359

Query: 629  ITDIFLGYHSESGWQTLVELIVEHYGLEVDQAAMTIFVCTVPVVMDACVKLWLFKYLPRL 450
            ITDIFLGYHSESGWQTL+E+IVEHYGLEVDQ+A+TIF+C VPVV+DACVKLWLFK+LPRL
Sbjct: 360  ITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLVPVVIDACVKLWLFKFLPRL 419

Query: 449  SPRVTNIFREMTRH 408
            SP VTNIF+EM RH
Sbjct: 420  SPSVTNIFQEMKRH 433


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