BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021863
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545227.1| PREDICTED: RING-H2 finger protein ATL66-like...   112   2e-22
ref|XP_002528317.1| RING-H2 finger protein ATL2N, putative [Rici...   108   2e-21
ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like...   107   5e-21
ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|XP_003518438.1| PREDICTED: RING-H2 finger protein ATL66-like...   105   2e-20

>ref|XP_003545227.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 221

 Score =  112 bits (279), Expect = 2e-22
 Identities = 60/146 (41%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
 Frame = -3

Query: 601 WTYD--LNDNNFKIHGHIVFYXXXXXXXXXXXXXXXXXIKWACKYRRLSTPSTXXXXXXX 428
           W YD  L+D   +I G  +F+                  +  C+ R              
Sbjct: 11  WHYDTELDDETLEIRGRKLFFIIVLFSIILLFTALFVFARRICRRRH------HHHNGLL 64

Query: 427 XAGGVSPCRSRGLDSVVIDKLPILLH-RCSLDEEAQCSICLSAFQDQEKVKILPNCNHSY 251
               V P ++ GLDS  I +LPI+LH RC+   EA+C ICL AF D EK+K+LP C+HS+
Sbjct: 65  LPDAVPPPQNTGLDSAAIKRLPIVLHPRCNRVAEAECCICLGAFADGEKLKVLPGCDHSF 124

Query: 250 HPECVDKWLKTQSNCPLCRASLRVNS 173
           H ECVDKWL   SNCPLCRASL+++S
Sbjct: 125 HCECVDKWLTNHSNCPLCRASLKLDS 150


>ref|XP_002528317.1| RING-H2 finger protein ATL2N, putative [Ricinus communis]
           gi|223532272|gb|EEF34075.1| RING-H2 finger protein
           ATL2N, putative [Ricinus communis]
          Length = 165

 Score =  108 bits (271), Expect = 2e-21
 Identities = 57/145 (39%), Positives = 75/145 (51%), Gaps = 5/145 (3%)
 Frame = -3

Query: 586 NDNNFKIHGHIVFYXXXXXXXXXXXXXXXXXIKWACKYRRLSTPSTXXXXXXXXAGGVSP 407
           +DN F+IHG  +F+                  +W C Y+    PS+           +SP
Sbjct: 19  HDNGFEIHGRTLFFVVVLFALVILVTLLFLYARWVCHYQHHHFPSSQANHAPHD---LSP 75

Query: 406 CRSRGLDSVVIDKLPILLHRCSLDE-----EAQCSICLSAFQDQEKVKILPNCNHSYHPE 242
           C  +GL   VI  + I LHR S          +C ICL  F+D +KVK+LP C+H +H E
Sbjct: 76  CH-QGLHPTVIKAMSITLHRSSSSSLGYYCTTECCICLGVFEDGDKVKVLPECSHCFHSE 134

Query: 241 CVDKWLKTQSNCPLCRASLRVNSPV 167
           CVDKWL  QS+CPLCRASL  +S V
Sbjct: 135 CVDKWLTAQSSCPLCRASLHRDSAV 159


>ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  107 bits (267), Expect = 5e-21
 Identities = 58/150 (38%), Positives = 81/150 (54%), Gaps = 7/150 (4%)
 Frame = -3

Query: 601 WTY-DLNDNNFKIHGHIVFYXXXXXXXXXXXXXXXXXIKWACKYRRLSTPSTXXXXXXXX 425
           W Y +L+D + +I G  +F+                  +W C+Y+    P+T        
Sbjct: 11  WHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQG-RLPTTAFSAAAVH 69

Query: 424 AGGVSPCRSRGLDSVVIDKLPILLHRCSLD------EEAQCSICLSAFQDQEKVKILPNC 263
           A  ++P   +GLD   I KLPI+LH    D      +E +C ICL  F+D EKVK+LP C
Sbjct: 70  APPLAP--PQGLDPASIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEKVKVLPAC 127

Query: 262 NHSYHPECVDKWLKTQSNCPLCRASLRVNS 173
           +H +H +CVDKWL   S+CPLCRASL+V S
Sbjct: 128 DHYFHCDCVDKWLTHHSSCPLCRASLKVES 157


>ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|222851987|gb|EEE89534.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  105 bits (263), Expect = 1e-20
 Identities = 56/154 (36%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
 Frame = -3

Query: 601 WTYD-LNDNNFKIHGHIVFYXXXXXXXXXXXXXXXXXIKWAC-KYRRLSTPSTXXXXXXX 428
           W Y+ L++N+F++ G  +FY                  +W C +  R + PS        
Sbjct: 11  WHYEELDENDFQVRGRALFYVLIVGSMIILIALLSIYARWVCLENTRHNLPSRLPVHHAP 70

Query: 427 XAGGVSPCRSRGLDSVVIDKLPILLHRCSLDE-------EAQCSICLSAFQDQEKVKILP 269
                     RGL+S +I  LPI LH+ +L         E++C ICL  F+D +++K+LP
Sbjct: 71  RLP------PRGLESTIIKALPITLHKSNLGTSNNGTAVESECCICLGVFEDGDRLKVLP 124

Query: 268 NCNHSYHPECVDKWLKTQSNCPLCRASLRVNSPV 167
            C H +H +CVDKWL TQS+CPLCRAS+R  S V
Sbjct: 125 QCQHCFHCDCVDKWLVTQSSCPLCRASIRAESAV 158


>ref|XP_003518438.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 173

 Score =  105 bits (262), Expect = 2e-20
 Identities = 57/149 (38%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
 Frame = -3

Query: 601 WTYD--LNDNNFKIHGHIVFYXXXXXXXXXXXXXXXXXIKWACKYRR-LSTPSTXXXXXX 431
           W YD  L+D   +I G  +F+                  +  C++   L  P+       
Sbjct: 11  WHYDTELDDETLEIRGRKLFFVIVLFSIILLFTALFVFARRICRHHHGLLLPNAVPPRH- 69

Query: 430 XXAGGVSPCRSRGLDSVVIDKLPILLH---RCSLDEEAQCSICLSAFQDQEKVKILPNCN 260
                +SP ++ GLD+  I +LPI+LH     +  EE +C ICL  F D EK+K+LP C+
Sbjct: 70  ---ASLSPPQNSGLDAEAIKRLPIVLHPRRNLAAAEETECCICLGVFADGEKLKVLPGCD 126

Query: 259 HSYHPECVDKWLKTQSNCPLCRASLRVNS 173
           HS+H ECVDKWL   SNCPLCRASL+++S
Sbjct: 127 HSFHCECVDKWLANHSNCPLCRASLKLDS 155