BLASTX nr result

ID: Coptis25_contig00021853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021853
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002319938.1| predicted protein [Populus trichocarpa] gi|2...   145   5e-33
ref|XP_002334056.1| predicted protein [Populus trichocarpa] gi|2...   142   3e-32
emb|CBI17998.3| unnamed protein product [Vitis vinifera]              137   9e-31
ref|XP_002277219.1| PREDICTED: G-type lectin S-receptor-like ser...   137   1e-30

>ref|XP_002325680.1| predicted protein [Populus trichocarpa] gi|222862555|gb|EEF00062.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  149 bits (376), Expect = 3e-34
 Identities = 74/147 (50%), Positives = 99/147 (67%), Gaps = 4/147 (2%)
 Frame = -2

Query: 440 MKSKGQTWLFLLIMFF----QAHLYFAADTISSGESLTQYQSLVSKSGIFQLGFFTPGTS 273
           M  +   W+   ++F     + H+   ADTIS+  SL+  Q++VS   +F+LGFF PG S
Sbjct: 1   MDVRNNPWIMPFVIFLCFSLKPHVSLGADTISANSSLSGDQTVVSAGKVFELGFFKPGNS 60

Query: 272 LKYYIGIWYMNKNIPTQSVVWVANRDTPLTDPFSSELKLLDNGNLVLFNSSKIAIWSTNT 93
             YYIG+WY    +  Q++VWVANR+TP++D FSSEL++ D GNL LFN SKI IWSTN 
Sbjct: 61  SNYYIGMWYYRDKVSAQTIVWVANRETPVSDRFSSELRISD-GNLALFNESKILIWSTNL 119

Query: 92  TSKAINSSEVVLGDDGNLVLRNRVRPS 12
           +S +  S E VLG+DGNLVLR+R  PS
Sbjct: 120 SSSSSRSVEAVLGNDGNLVLRDRSNPS 146


>ref|XP_002319938.1| predicted protein [Populus trichocarpa] gi|222858314|gb|EEE95861.1|
           predicted protein [Populus trichocarpa]
          Length = 826

 Score =  145 bits (365), Expect = 5e-33
 Identities = 72/142 (50%), Positives = 95/142 (66%), Gaps = 4/142 (2%)
 Frame = -2

Query: 440 MKSKGQTWLFLLIMFF----QAHLYFAADTISSGESLTQYQSLVSKSGIFQLGFFTPGTS 273
           M  +   W+   ++FF     +H+   ADTIS+  SL+  Q++VS   +F+LGFF PG S
Sbjct: 1   MDVRNNPWIMFFVIFFCFPLNSHVSLGADTISANSSLSGDQTIVSARKVFELGFFHPGKS 60

Query: 272 LKYYIGIWYMNKNIPTQSVVWVANRDTPLTDPFSSELKLLDNGNLVLFNSSKIAIWSTNT 93
             YYIG+WY    +  Q++VWVANR+TP++D FSSEL+ +  GNLVLFN S I IWSTN 
Sbjct: 61  SNYYIGMWYHRDKVSEQTIVWVANRETPVSDRFSSELR-ISGGNLVLFNESMIPIWSTNL 119

Query: 92  TSKAINSSEVVLGDDGNLVLRN 27
           +S    S E VLGDDGNLVLR+
Sbjct: 120 SSSRSGSVEAVLGDDGNLVLRD 141


>ref|XP_002334056.1| predicted protein [Populus trichocarpa] gi|222839677|gb|EEE78000.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  142 bits (358), Expect = 3e-32
 Identities = 70/130 (53%), Positives = 89/130 (68%)
 Frame = -2

Query: 416 LFLLIMFFQAHLYFAADTISSGESLTQYQSLVSKSGIFQLGFFTPGTSLKYYIGIWYMNK 237
           +F       +H+   ADTIS+  SL+  Q++VS   +F+LGFF PG S  YYIG+WY   
Sbjct: 1   VFFFCFSLNSHVSLGADTISANSSLSGDQTIVSARKVFELGFFHPGNSSNYYIGMWYCTD 60

Query: 236 NIPTQSVVWVANRDTPLTDPFSSELKLLDNGNLVLFNSSKIAIWSTNTTSKAINSSEVVL 57
            +  Q++VWVANRDTP++D FSSEL+ +  GNL LFN SKI IWSTN  S   +S E VL
Sbjct: 61  KVSKQTIVWVANRDTPVSDRFSSELR-ISGGNLFLFNESKIPIWSTNLISSRSSSVEAVL 119

Query: 56  GDDGNLVLRN 27
           GDDGNLVLR+
Sbjct: 120 GDDGNLVLRD 129


>emb|CBI17998.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  137 bits (346), Expect = 9e-31
 Identities = 82/170 (48%), Positives = 104/170 (61%), Gaps = 4/170 (2%)
 Frame = -2

Query: 527 FKFQKFALSLVGPHCSYILILTSSCVKEEMKSKGQTWLFLLIMFF----QAHLYFAADTI 360
           F    F   ++ P  S +L   S      M ++   WL L I+F     + HL    DTI
Sbjct: 39  FCLLSFYTLVINPLKSLLLFGQSGAA---MDTRNNPWLKLSILFLCLTLKIHLSHGGDTI 95

Query: 359 SSGESLTQYQSLVSKSGIFQLGFFTPGTSLKYYIGIWYMNKNIPTQSVVWVANRDTPLTD 180
           S  E+L+  Q+LVS  G F LGFF PG S  YYIG+WY  K +  Q++VWVANRDTP+TD
Sbjct: 96  SGNETLSGDQTLVSAGGNFVLGFFKPGNSSYYYIGMWY--KKVSEQTIVWVANRDTPVTD 153

Query: 179 PFSSELKLLDNGNLVLFNSSKIAIWSTNTTSKAINSSEVVLGDDGNLVLR 30
             SS+LK+LD GNLVLFN S++ +WSTN TS +  S E VL D+GN VLR
Sbjct: 154 NRSSQLKILD-GNLVLFNESQVPVWSTNLTSNS-TSLEAVLLDEGNFVLR 201


>ref|XP_002277219.1| PREDICTED: G-type lectin S-receptor-like serine/threonine-protein
           kinase At2g19130 isoform 1 [Vitis vinifera]
          Length = 826

 Score =  137 bits (345), Expect = 1e-30
 Identities = 76/141 (53%), Positives = 95/141 (67%), Gaps = 4/141 (2%)
 Frame = -2

Query: 440 MKSKGQTWLFLLIMFF----QAHLYFAADTISSGESLTQYQSLVSKSGIFQLGFFTPGTS 273
           M ++   WL L I+F     + HL    DTIS  E+L+  Q+LVS  G F LGFF PG S
Sbjct: 1   MDTRNNPWLKLSILFLCLTLKIHLSHGGDTISGNETLSGDQTLVSAGGNFVLGFFKPGNS 60

Query: 272 LKYYIGIWYMNKNIPTQSVVWVANRDTPLTDPFSSELKLLDNGNLVLFNSSKIAIWSTNT 93
             YYIG+WY  K +  Q++VWVANRDTP+TD  SS+LK+LD GNLVLFN S++ +WSTN 
Sbjct: 61  SYYYIGMWY--KKVSEQTIVWVANRDTPVTDNRSSQLKILD-GNLVLFNESQVPVWSTNL 117

Query: 92  TSKAINSSEVVLGDDGNLVLR 30
           TS +  S E VL D+GN VLR
Sbjct: 118 TSNS-TSLEAVLLDEGNFVLR 137


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