BLASTX nr result

ID: Coptis25_contig00021824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021824
         (1071 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205...   151   2e-34
ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267...   147   3e-33
ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830...   143   8e-32
gb|AAD38262.1|AC006193_18 Hypothetical Protein [Arabidopsis thal...   141   3e-31
gb|AFW69702.1| structural constituent of ribosome [Zea mays]          141   3e-31

>ref|XP_004151847.1| PREDICTED: uncharacterized protein LOC101205390 [Cucumis sativus]
           gi|449524434|ref|XP_004169228.1| PREDICTED:
           uncharacterized LOC101205390 [Cucumis sativus]
          Length = 500

 Score =  151 bits (382), Expect = 2e-34
 Identities = 76/172 (44%), Positives = 112/172 (65%)
 Frame = +1

Query: 445 DNKDDEIFSGVHPLIEKVLKMERKINKDKMGRNTNNNNVRDWDLEIPXXXXXXXXXXXXX 624
           DN+D+E + GV PLIEK+ K   ++  D       +++  D D E               
Sbjct: 91  DNEDEEDYMGVGPLIEKLDKKNSRVTGDLNAYEEPSDSDSDADDE------------RFS 138

Query: 625 XXAIRKRAELLDKKCQRHEDLVRNFTNAETFEEAYKCMVTINKFEEMHLKIPLEYKVIGE 804
             ++RKR E   KK +RH++L++NFT+A+  ++A+K M  I++FE+ H ++  EY+VIGE
Sbjct: 139 RESVRKRFENFQKKFERHKELLKNFTDADNIDDAFKWMSKIDRFEQKHFQLRPEYRVIGE 198

Query: 805 MMNRLRGATGKEKFMLQQKLHRALKVVQWKEKYDPNNQENYGIIEREEDSPS 960
           +MNRL+ A GKEKFMLQQKL+RA+++V+WKE YDPNN  NYG I+R +  PS
Sbjct: 199 LMNRLKVAEGKEKFMLQQKLNRAMRIVEWKEAYDPNNPANYGAIQRRQGGPS 250


>ref|XP_002276769.1| PREDICTED: uncharacterized protein LOC100267778 [Vitis vinifera]
          Length = 499

 Score =  147 bits (372), Expect = 3e-33
 Identities = 77/180 (42%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
 Frame = +1

Query: 424 AGLPIPN-DNKDDEIFSGVHPLIEKVLKMERKINKDKMGRNTNNNNVRDWDLEIPXXXXX 600
           AGL +   +++D+E + GV PLIEK+ K + K + D        ++  D D E       
Sbjct: 80  AGLDVKEIEDEDEEDYMGVGPLIEKLEKEKLKSSGDLNMYEERTDSDSDEDDE------- 132

Query: 601 XXXXXXXXXXAIRKRAELLDKKCQRHEDLVRNFTNAETFEEAYKCMVTINKFEEMHLKIP 780
                     A++KRAE+ +KK +RH +L+ NF  AET ++A+K M  I+KFE+ HL++ 
Sbjct: 133 -----RFTTEAVKKRAEVFEKKFKRHGELLNNFAEAETLDDAFKWMTRIDKFEQKHLQLR 187

Query: 781 LEYKVIGEMMNRLRGATGKEKFMLQQKLHRALKVVQWKEKYDPNNQENYGIIEREEDSPS 960
            EY+VIGE+MNRL+ A GK+KF+LQQKL+RA+++++WKE YDPNN  NYG I+ ++  P+
Sbjct: 188 PEYRVIGELMNRLKEAEGKDKFILQQKLNRAVRLIEWKEAYDPNNPANYGYIQHQQVGPN 247


>ref|XP_003573697.1| PREDICTED: uncharacterized protein LOC100830533 [Brachypodium
           distachyon]
          Length = 516

 Score =  143 bits (360), Expect = 8e-32
 Identities = 71/168 (42%), Positives = 113/168 (67%)
 Frame = +1

Query: 445 DNKDDEIFSGVHPLIEKVLKMERKINKDKMGRNTNNNNVRDWDLEIPXXXXXXXXXXXXX 624
           D + +E + GV PLIEK+ +  RK  +D +  +T       W+   P             
Sbjct: 104 DEEAEEDYLGVKPLIEKLER--RKAKEDSLPDDTF------WE---PTDSDSDEDDERFS 152

Query: 625 XXAIRKRAELLDKKCQRHEDLVRNFTNAETFEEAYKCMVTINKFEEMHLKIPLEYKVIGE 804
             +I++R +  D+KC+RH +L+R+F  AET ++A+K M+ I+KFE+ HLK+PLEY+VIG+
Sbjct: 153 PDSIKRRVDEFDRKCKRHSELLRSFAQAETLDDAHKLMIKIDKFEQRHLKLPLEYRVIGD 212

Query: 805 MMNRLRGATGKEKFMLQQKLHRALKVVQWKEKYDPNNQENYGIIEREE 948
           MMNRL+ ATGKE+F+L QKL+RA+++++ KE YDP+N  N+G+I+ ++
Sbjct: 213 MMNRLKDATGKERFILLQKLNRAVRLMECKEAYDPSNPANFGVIQHQQ 260


>gb|AAD38262.1|AC006193_18 Hypothetical Protein [Arabidopsis thaliana]
          Length = 495

 Score =  141 bits (355), Expect = 3e-31
 Identities = 71/167 (42%), Positives = 111/167 (66%)
 Frame = +1

Query: 445 DNKDDEIFSGVHPLIEKVLKMERKINKDKMGRNTNNNNVRDWDLEIPXXXXXXXXXXXXX 624
           D +D+E + G+ P IEK+ K   K + +   R  ++++  ++D EI              
Sbjct: 109 DAEDEEDYLGIEPFIEKLKKQNLKDDGELNRREESSDSDSEYD-EIDLDEE--------- 158

Query: 625 XXAIRKRAELLDKKCQRHEDLVRNFTNAETFEEAYKCMVTINKFEEMHLKIPLEYKVIGE 804
               RK+ ++ +KK QRH++L++  T +ET +EA++ M  ++KFEE H K+  EY+VIGE
Sbjct: 159 ----RKKEDIFNKKFQRHKELLQTLTKSETLDEAFRWMNKLDKFEEKHFKLRPEYRVIGE 214

Query: 805 MMNRLRGATGKEKFMLQQKLHRALKVVQWKEKYDPNNQENYGIIERE 945
           +MNRL+ A GKEKF+LQQKL+RA+++V+WKE +DPNN  NYG+IER+
Sbjct: 215 LMNRLKVAEGKEKFVLQQKLNRAMRLVEWKEAFDPNNPANYGVIERD 261


>gb|AFW69702.1| structural constituent of ribosome [Zea mays]
          Length = 555

 Score =  141 bits (355), Expect = 3e-31
 Identities = 73/171 (42%), Positives = 113/171 (66%), Gaps = 5/171 (2%)
 Frame = +1

Query: 451 KDDEIFSGVHPLIEKVLKMERKINKDKMGRN-----TNNNNVRDWDLEIPXXXXXXXXXX 615
           +D+E + GV PLIEK   +ER+  KD          T++++  D +   P          
Sbjct: 146 EDEEDYMGVKPLIEK---LERRKTKDMAAGEGFWEPTDSDSDEDDERYTPD--------- 193

Query: 616 XXXXXAIRKRAELLDKKCQRHEDLVRNFTNAETFEEAYKCMVTINKFEEMHLKIPLEYKV 795
                AI++R +  ++KC+RHE+ +++F  A+T +EA+K M  IN FEE HLK+PLEY+V
Sbjct: 194 -----AIKQRVDEFERKCKRHEEFLQSFAEADTLDEAHKWMTKINNFEERHLKLPLEYRV 248

Query: 796 IGEMMNRLRGATGKEKFMLQQKLHRALKVVQWKEKYDPNNQENYGIIEREE 948
           IG+MMNRL+ ATGKE+F+L QKL+RA+++++ KE YDP+N  N+GII+ ++
Sbjct: 249 IGDMMNRLKDATGKERFVLLQKLNRAVRIMEIKEAYDPSNPANFGIIQHQQ 299


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