BLASTX nr result

ID: Coptis25_contig00021823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021823
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39738.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002267869.1| PREDICTED: protein TIC 20-v, chloroplastic [...    61   1e-07
ref|XP_003544648.1| PREDICTED: tic20 family protein-like [Glycin...    59   3e-07
ref|XP_003519631.1| PREDICTED: tic20 family protein-like isoform...    59   3e-07
gb|ACU20747.1| unknown [Glycine max]                                   59   3e-07

>emb|CBI39738.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 207 LFLFVSLVYGSTSCLLGQIPRLPIVAEAAERQV 109
           LFL VSL+YGS+SCLLGQ+PRLPIVAEAA+RQV
Sbjct: 179 LFLLVSLIYGSSSCLLGQVPRLPIVAEAADRQV 211


>ref|XP_002267869.1| PREDICTED: protein TIC 20-v, chloroplastic [Vitis vinifera]
          Length = 208

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -3

Query: 207 LFLFVSLVYGSTSCLLGQIPRLPIVAEAAERQV 109
           LFL VSL+YGS+SCLLGQ+PRLPIVAEAA+RQV
Sbjct: 175 LFLLVSLIYGSSSCLLGQVPRLPIVAEAADRQV 207


>ref|XP_003544648.1| PREDICTED: tic20 family protein-like [Glycine max]
          Length = 211

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 207 LFLFVSLVYGSTSCLLGQIPRLPIVAEAAERQV 109
           LFL V L+YGS+SCLLGQIPRLPIVAEAA+RQV
Sbjct: 178 LFLLVCLIYGSSSCLLGQIPRLPIVAEAADRQV 210


>ref|XP_003519631.1| PREDICTED: tic20 family protein-like isoform 1 [Glycine max]
           gi|356501640|ref|XP_003519632.1| PREDICTED: tic20 family
           protein-like isoform 2 [Glycine max]
          Length = 211

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 207 LFLFVSLVYGSTSCLLGQIPRLPIVAEAAERQV 109
           LFL V L+YGS+SCLLGQIPRLPIVAEAA+RQV
Sbjct: 178 LFLLVCLIYGSSSCLLGQIPRLPIVAEAADRQV 210


>gb|ACU20747.1| unknown [Glycine max]
          Length = 73

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/33 (84%), Positives = 31/33 (93%)
 Frame = -3

Query: 207 LFLFVSLVYGSTSCLLGQIPRLPIVAEAAERQV 109
           LFL V L+YGS+SCLLGQIPRLPIVAEAA+RQV
Sbjct: 40  LFLLVCLIYGSSSCLLGQIPRLPIVAEAADRQV 72


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