BLASTX nr result

ID: Coptis25_contig00021817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021817
         (671 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV29178.1| disease resistance protein R3a-like protein [Sola...   117   2e-24
gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solan...   115   1e-23
gb|ABV29179.1| disease resistance protein R3a-like protein [Sola...   112   5e-23
gb|AAW48300.1| potato resistance-like protein I2GA-SH23-1 [Solan...   112   7e-23
emb|CAN66640.1| hypothetical protein VITISV_013554 [Vitis vinifera]   112   7e-23

>gb|ABV29178.1| disease resistance protein R3a-like protein [Solanum demissum]
          Length = 1270

 Score =  117 bits (294), Expect = 2e-24
 Identities = 72/221 (32%), Positives = 115/221 (52%), Gaps = 4/221 (1%)
 Frame = +3

Query: 3    SLCIKQLERVSQGQEAEEANLASKKYLDRLELQWSNTDFP-IQVEL-ILNNLEPHKSLKE 176
            SL I +L+ V   +EA +A +  K ++++L L+WS +     Q E  IL++L PH ++KE
Sbjct: 706  SLSILELQNVVDRREAAKAKMREKNHVEKLSLEWSESSADNSQTERDILDDLHPHTNIKE 765

Query: 177  LVLKRYRAGQFPPWVCNPLFSKLTCISLYECDNCXXXXXXXXXXXXXXXXVAVMTNLQYL 356
            L +  YR  +FP W+ +PLF KL  +SL  C +C                +  M  +  +
Sbjct: 766  LRITGYRGKKFPNWLADPLFLKLVKLSLRNCKDCDSLPALGQLPSLKILSIRGMHRITKV 825

Query: 357  SGEFYGDTSVGVRFQSLESLELCDMPSLVSWNGTNDNDMGRLRELTIGNCPQL-VIIP-S 530
            + EFYG +S    F SLE LE   M     W+   + +   L+ L+I NCP+L V IP  
Sbjct: 826  TEEFYGSSSSKKSFNSLEELEFAYMSKWKQWHVLGNGEFPTLKNLSIKNCPELSVEIPIQ 885

Query: 531  LHYLESLEKLKFENCPELQSLSTHRLSTSVRSLIVRGCFKL 653
            L  ++ +E+L   +C  L S     L +++ ++ + GC KL
Sbjct: 886  LEGMKQIERLSIVDCNSLTSFPFSILLSTLNTIYISGCQKL 926


>gb|ABI34374.1| Disease resistance protein I2C-5, putative [Solanum demissum]
          Length = 1213

 Score =  115 bits (287), Expect = 1e-23
 Identities = 78/242 (32%), Positives = 115/242 (47%), Gaps = 23/242 (9%)
 Frame = +3

Query: 3    SLCIKQLERVSQGQEAEEANLASKKYLDRLELQWSNTDFPIQVEL---ILNNLEPHKSLK 173
            SL + +L+ V   +EA +A +  K ++D+L L+WS +      +    IL+ L PHK++K
Sbjct: 693  SLSVVELQNVVDRREAVKAKMREKNHVDKLSLEWSESSSADNSQTERDILDELSPHKNIK 752

Query: 174  ELVLKRYRAGQFPPWVCNPLFSKLTCISLYECDNCXXXXXXXXXXXXXXXXVAVMTNLQY 353
            E+ +  YR  +FP W+ +PLF KL  +S+  C NC                ++ M  +  
Sbjct: 753  EVKITGYRGTKFPNWLADPLFLKLVQLSVVNCKNCSSLPSLGQLPCLKFLSISGMHGITE 812

Query: 354  LSGEFYGDTSVGVRFQSLESLELCDMPSLVSWNGTNDNDMGRLRELTIGNCPQLVIIP-- 527
            LS EFYG  S    F SL  L   DMP    W+     +   L +L I NCP+L +    
Sbjct: 813  LSEEFYGSLSSKKPFNSLVDLRFEDMPEWKQWHVLGSGEFAILEKLKIKNCPELSLETPI 872

Query: 528  SLHYLESL-------------EKLKFEN-----CPELQSLSTHRLSTSVRSLIVRGCFKL 653
             L  L+SL             +KLKFE+     C  +  +S   L T+ R+L V  C  L
Sbjct: 873  QLSCLKSLLPATLKRIRISGCKKLKFEDLTLDECDCIDDISPELLPTA-RTLTVSNCHNL 931

Query: 654  TR 659
            TR
Sbjct: 932  TR 933


>gb|ABV29179.1| disease resistance protein R3a-like protein [Solanum demissum]
          Length = 1251

 Score =  112 bits (281), Expect = 5e-23
 Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 22/239 (9%)
 Frame = +3

Query: 3    SLCIKQLERVSQGQEAEEANLASKKYLDRLELQWSNT--DFPIQVELILNNLEPHKSLKE 176
            SL I +L+ V+ G+EA +A +  K+++++L L+WS +  D  +    IL+ L PH ++KE
Sbjct: 708  SLSILELQNVADGREALKAKMREKEHVEKLSLEWSGSIADNSLTERDILDELRPHTNIKE 767

Query: 177  LVLKRYRAGQFPPWVCNPLFSKLTCISLYECDNCXXXXXXXXXXXXXXXXVAVMTNLQYL 356
            L +  YR   FP W+ + LF KL  +SL  C++C                +  M  +  +
Sbjct: 768  LRITGYRGTIFPNWLADHLFLKLVELSLSNCNDCDSLPGLGQLPSLKYLSIRGMHQITEV 827

Query: 357  SGEFYGDTSVGVRFQSLESLELCDMPSLVSWNGTNDNDMGRLRELTIGNCPQLV------ 518
            + EFYG       F+SLE LE  +MP    W+     +   L++L+I NCP+L+      
Sbjct: 828  TEEFYGSLFSKKPFKSLEKLEFEEMPEWKKWHVLGSVEFPILKDLSIKNCPKLMGKLPEN 887

Query: 519  ----------IIPSLHY----LESLEKLKFENCPELQSLSTHRLSTSVRSLIVRGCFKL 653
                        P L++    LE +E L F +C  L SL    L  S++++ +  C KL
Sbjct: 888  LCSLIELRISRCPELNFETPKLEQIEGLFFSDCNSLTSLPFSILPNSLKTIRISSCQKL 946


>gb|AAW48300.1| potato resistance-like protein I2GA-SH23-1 [Solanum tuberosum]
          Length = 1265

 Score =  112 bits (280), Expect = 7e-23
 Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 29/246 (11%)
 Frame = +3

Query: 3    SLCIKQLERVSQGQEAEEANLASKKYLDRLELQWSNTDFPIQVEL---ILNNLEPHKSLK 173
            SL + +L+ V   +EA +A +  K ++D+L L+WS +      +    IL+ L PHK++K
Sbjct: 708  SLSVVELQNVVDSREAVKAKMREKNHVDKLSLEWSESSSADNSQTERDILDELRPHKNIK 767

Query: 174  ELVLKRYRAGQFPPWVCNPLFSKLTCISLYECDNCXXXXXXXXXXXXXXXXVAVMTNLQY 353
            EL +  YR   FP W+ +PLF KL  +SL  C NC                +  M  +  
Sbjct: 768  ELQIIGYRGTNFPNWLADPLFLKLVQLSLRNCKNCYSLPALGQLPFLKLLSIGGMPGITE 827

Query: 354  LSGEFYGDTSVGVRFQSLESLELCDMPSLVSWNGTNDNDMGRLRELTIGNCPQLVI--IP 527
            ++ EFYG  S    F  LE LE  DMP    W+     +   L +L I NCP+L +  +P
Sbjct: 828  VTEEFYGSWSSKKPFNCLEKLEFKDMPEWKQWDQLGSGEFPILEKLLIENCPELGLETVP 887

Query: 528  ------------------------SLHYLESLEKLKFENCPELQSLSTHRLSTSVRSLIV 635
                                     L  ++ +E+L+  +C  L S     L T+++ + +
Sbjct: 888  IQLSSLKSFEVIGSPMVGVVFYDAQLEGMKQIEELRISDCNSLTSFPFSILPTTLKRIEI 947

Query: 636  RGCFKL 653
              C KL
Sbjct: 948  SDCQKL 953


>emb|CAN66640.1| hypothetical protein VITISV_013554 [Vitis vinifera]
          Length = 844

 Score =  112 bits (280), Expect = 7e-23
 Identities = 70/206 (33%), Positives = 107/206 (51%), Gaps = 12/206 (5%)
 Frame = +3

Query: 3   SLCIKQLERVSQGQEAEEANLASKKYLDRLELQWSN--TDFPIQ---VELILNNLEPHKS 167
           +L I  +E V+  ++A +AN+  KK+LD+L L WS+   D  +Q   +  ILNNL+PH +
Sbjct: 72  TLDISNMENVACAKDALQANMKDKKHLDKLALNWSDEIADGVVQSGVIGHILNNLQPHPN 131

Query: 168 LKELVLKRYRAGQFPPWVCNPLFSKLTCISLYECDNCXXXXXXXXXXXXXXXXVAVMTNL 347
           LK+  +  Y    FP W+ +P FS L C+ L  C+NC                ++ MT +
Sbjct: 132 LKQFTITNYPGVIFPDWLGDPSFSNLLCLELRNCENCSSLPPLGLLPSLQQLLISRMTGI 191

Query: 348 QYLSGEFYGDTSVGV----RFQSLESLELCDMPSLVSW--NGTNDNDMGRLRELTIGNCP 509
             +  EFYGD S  +     F SL++L    M +   W   G+   +  RL+EL I  CP
Sbjct: 192 AKVGSEFYGDASSSITIKPSFPSLQALRFEYMDNWEKWLCCGSRRGEFPRLQELYIKKCP 251

Query: 510 QLV-IIPSLHYLESLEKLKFENCPEL 584
           +L   +P    L  L+KL+ + CP+L
Sbjct: 252 KLTGKLPK--QLRCLKKLEIDGCPQL 275


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