BLASTX nr result

ID: Coptis25_contig00021816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021816
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137799.1| PREDICTED: uncharacterized protein LOC101211...   164   6e-39
emb|CBI32619.3| unnamed protein product [Vitis vinifera]              164   6e-39
dbj|BAJ86103.1| predicted protein [Hordeum vulgare subsp. vulgare]    160   9e-38
ref|XP_002525194.1| conserved hypothetical protein [Ricinus comm...   158   5e-37
ref|XP_002322846.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36

>ref|XP_004137799.1| PREDICTED: uncharacterized protein LOC101211971 [Cucumis sativus]
           gi|449519160|ref|XP_004166603.1| PREDICTED:
           uncharacterized protein LOC101226769 [Cucumis sativus]
          Length = 145

 Score =  164 bits (416), Expect = 6e-39
 Identities = 77/109 (70%), Positives = 88/109 (80%), Gaps = 7/109 (6%)
 Frame = -3

Query: 456 PCCSTRNSNDNSEKDD-------KFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRR 298
           P CS R   D  + DD       K STDWDKAWS FKK+GKK++FS F+PNKYVSWNPRR
Sbjct: 35  PLCSGRRPKDPRKDDDNDDQTRDKLSTDWDKAWSKFKKRGKKTMFSDFSPNKYVSWNPRR 94

Query: 297 SNYPLSEEVDPIKRAERSNLMLWTSPRFTLAGAIVVVSLLLIYTLLAPM 151
           S YPLSEEVDPIKR ERSNLMLWTSPRFTLAGAIV+++ LL+YT+LAP+
Sbjct: 95  SEYPLSEEVDPIKRTERSNLMLWTSPRFTLAGAIVIITFLLVYTILAPI 143


>emb|CBI32619.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  164 bits (416), Expect = 6e-39
 Identities = 74/97 (76%), Positives = 89/97 (91%)
 Frame = -3

Query: 438 NSNDNSEKDDKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIK 259
           ++N+++ + DKFSTDWDKAWSSF+KQGKK LFSQF+P+KYV+WNPRRSNYPLSEEVDPIK
Sbjct: 48  DANNDNNRGDKFSTDWDKAWSSFRKQGKKRLFSQFSPDKYVTWNPRRSNYPLSEEVDPIK 107

Query: 258 RAERSNLMLWTSPRFTLAGAIVVVSLLLIYTLLAPMK 148
           R ERSNLMLWTSP FTL  AI++V+ LLIYT+LAP+K
Sbjct: 108 RTERSNLMLWTSPGFTLTVAIIIVTFLLIYTILAPVK 144


>dbj|BAJ86103.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 124

 Score =  160 bits (406), Expect = 9e-38
 Identities = 78/105 (74%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
 Frame = -3

Query: 456 PCCSTRNSNDNSEKD--DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPL 283
           P CS R S D   +D  D  STDWDKAWS+FKK+GKK+LFS+F PNKYV+WNPRRS YPL
Sbjct: 21  PRCS-RGSPDKRGRDEGDTSSTDWDKAWSTFKKEGKKTLFSEFTPNKYVTWNPRRSEYPL 79

Query: 282 SEEVDPIKRAERSNLMLWTSPRFTLAGAIVVVSLLLIYTLLAPMK 148
           SEEVDPIKRAERSNLMLWTSPRFTL GAI++VS LLIYT++ P K
Sbjct: 80  SEEVDPIKRAERSNLMLWTSPRFTLVGAIIIVSALLIYTIVVPPK 124


>ref|XP_002525194.1| conserved hypothetical protein [Ricinus communis]
           gi|223535491|gb|EEF37160.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  158 bits (400), Expect = 5e-37
 Identities = 71/88 (80%), Positives = 83/88 (94%)
 Frame = -3

Query: 411 DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRAERSNLML 232
           +KFSTDWDKAWS+F+KQGKK+LFS F+PNKYVSWNPRRS YPLSEEVDPIKRAERSNL L
Sbjct: 12  EKFSTDWDKAWSNFRKQGKKTLFSGFSPNKYVSWNPRRSKYPLSEEVDPIKRAERSNLEL 71

Query: 231 WTSPRFTLAGAIVVVSLLLIYTLLAPMK 148
           WTSPRFTL GAI++VS LL+YT+L+P++
Sbjct: 72  WTSPRFTLVGAILIVSFLLLYTILSPIR 99


>ref|XP_002322846.1| predicted protein [Populus trichocarpa] gi|222867476|gb|EEF04607.1|
           predicted protein [Populus trichocarpa]
          Length = 89

 Score =  157 bits (396), Expect = 1e-36
 Identities = 68/88 (77%), Positives = 81/88 (92%)
 Frame = -3

Query: 411 DKFSTDWDKAWSSFKKQGKKSLFSQFNPNKYVSWNPRRSNYPLSEEVDPIKRAERSNLML 232
           DKFSTDWDKAWS+F+K+GKK+ FSQF+PNKYV+WNP+RSNYPLSEEVDPIKRAERSNL L
Sbjct: 2   DKFSTDWDKAWSNFRKKGKKAFFSQFSPNKYVTWNPKRSNYPLSEEVDPIKRAERSNLRL 61

Query: 231 WTSPRFTLAGAIVVVSLLLIYTLLAPMK 148
           WTSP FTL GAI++V+ LL+YT++ P K
Sbjct: 62  WTSPEFTLVGAIIIVTFLLVYTIVVPSK 89


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