BLASTX nr result

ID: Coptis25_contig00021814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021814
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15549.3| unnamed protein product [Vitis vinifera]              341   1e-91
ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored prot...   341   1e-91
ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|2...   329   5e-88
gb|ABK95654.1| unknown [Populus trichocarpa]                          328   1e-87
ref|XP_002533130.1| conserved hypothetical protein [Ricinus comm...   326   4e-87

>emb|CBI15549.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  341 bits (875), Expect = 1e-91
 Identities = 173/275 (62%), Positives = 213/275 (77%), Gaps = 4/275 (1%)
 Frame = -3

Query: 924 NLATCPLDLPDELFHGIGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK-- 754
           ++A CPL+LPDELFHGI  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +  
Sbjct: 49  DVAGCPLNLPDELFHGIKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGL 108

Query: 753 -MAVTPYDLPILPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEA 577
               TPYDLP+LP+DSE+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEA
Sbjct: 109 APEATPYDLPLLPDDSETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEA 168

Query: 576 FRVSKEGKLVGDKSVRMLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRK 397
           F VS +GKLVGD+SV+ LE DCL+ N     L  CSKCLN LY L ++ + ++++   R 
Sbjct: 169 FSVSSKGKLVGDESVKKLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARS 227

Query: 396 SKMHSRDCELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDS 217
            KMH+RDCELMGLTWLL+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDS
Sbjct: 228 RKMHNRDCELMGLTWLLAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDS 287

Query: 216 AELDDKSSSNKRLLTTSGALVHVCAIIIFVLSFRF 112
           AE+   SSS     T+    +H+C   I  LSF +
Sbjct: 288 AEISSHSSS-----TSLHFSIHLC---ILSLSFLY 314


>ref|XP_003634199.1| PREDICTED: uncharacterized GPI-anchored protein At4g28100-like
           [Vitis vinifera]
          Length = 327

 Score =  341 bits (875), Expect = 1e-91
 Identities = 173/275 (62%), Positives = 213/275 (77%), Gaps = 4/275 (1%)
 Frame = -3

Query: 924 NLATCPLDLPDELFHGIGHACS-GKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGK-- 754
           ++A CPL+LPDELFHGI  ACS GK  +G+L RS+CCPVLAAWLYSAY+GTALGRA +  
Sbjct: 49  DVAGCPLNLPDELFHGIKTACSAGKGASGELRRSRCCPVLAAWLYSAYSGTALGRAKRGL 108

Query: 753 -MAVTPYDLPILPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEA 577
               TPYDLP+LP+DSE+CV++L K+LK RG+EL +PNETCDVVYC+C IRLHPLSCPEA
Sbjct: 109 APEATPYDLPLLPDDSETCVNDLEKSLKSRGVELVKPNETCDVVYCFCGIRLHPLSCPEA 168

Query: 576 FRVSKEGKLVGDKSVRMLENDCLNNNKSHLSLARCSKCLNRLYQLKEENSMDTTRKSDRK 397
           F VS +GKLVGD+SV+ LE DCL+ N     L  CSKCLN LY L ++ + ++++   R 
Sbjct: 169 FSVSSKGKLVGDESVKKLERDCLSTN-GFPGLGGCSKCLNTLYLLGKDKTGNSSKLEARS 227

Query: 396 SKMHSRDCELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLAVDS 217
            KMH+RDCELMGLTWLL+KNRTAYIHTV+AVLRA+M+S DGS P SC+L SDG+PLAVDS
Sbjct: 228 RKMHNRDCELMGLTWLLAKNRTAYIHTVSAVLRAIMMSTDGSDPLSCTLNSDGMPLAVDS 287

Query: 216 AELDDKSSSNKRLLTTSGALVHVCAIIIFVLSFRF 112
           AE+   SSS     T+    +H+C   I  LSF +
Sbjct: 288 AEISSHSSS-----TSLHFSIHLC---ILSLSFLY 314


>ref|XP_002322090.1| predicted protein [Populus trichocarpa] gi|222869086|gb|EEF06217.1|
           predicted protein [Populus trichocarpa]
          Length = 334

 Score =  329 bits (844), Expect = 5e-88
 Identities = 164/279 (58%), Positives = 205/279 (73%), Gaps = 11/279 (3%)
 Frame = -3

Query: 924 NLATCPLDLPDELFHGIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMA 748
           NLA CPLDLP+ELFHGI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA K+ 
Sbjct: 51  NLAGCPLDLPNELFHGINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANKVI 110

Query: 747 VTP-------YDLPILPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLS 589
                     YD+P+LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLS
Sbjct: 111 PATDTGRSPSYDMPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLS 170

Query: 588 CPEAFRVSKEGKLVGDKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDT 418
           CPEAF +++ GKLVGDK V  LE +CL   NN      L  CSKCLN LY L  + ++++
Sbjct: 171 CPEAFSLNQNGKLVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNS 230

Query: 417 TRKSDRKSKMHSRDCELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDG 238
           ++  DR +KMH++DC+LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG
Sbjct: 231 SKSEDRTTKMHNKDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDG 290

Query: 237 LPLAVDSAELDDKSSSNKRLLTTSGALVHVCAIIIFVLS 121
           +PL VDS+E+     SN     +  A ++V   +I +LS
Sbjct: 291 MPLPVDSSEI-----SNNSFSISHQAPIYVTIAVICLLS 324


>gb|ABK95654.1| unknown [Populus trichocarpa]
          Length = 334

 Score =  328 bits (841), Expect = 1e-87
 Identities = 163/279 (58%), Positives = 205/279 (73%), Gaps = 11/279 (3%)
 Frame = -3

Query: 924 NLATCPLDLPDELFHGIGHAC-SGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMA 748
           NLA CPLDLP+ELFHGI  AC SG +  G L R++CCPVLAAWLYSAY+ TAL RA ++ 
Sbjct: 51  NLAGCPLDLPNELFHGINSACGSGSSATGHLHRTRCCPVLAAWLYSAYSATALSRANRVI 110

Query: 747 VTP-------YDLPILPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLS 589
                     YD+P+LP+DSE+CVD L K LK +GIEL +PNETCDVVYCYC IRLHPLS
Sbjct: 111 PATDTGRSPSYDMPLLPDDSETCVDGLSKGLKEKGIELFKPNETCDVVYCYCGIRLHPLS 170

Query: 588 CPEAFRVSKEGKLVGDKSVRMLENDCL---NNNKSHLSLARCSKCLNRLYQLKEENSMDT 418
           CPEAF +++ GKLVGDK V  LE +CL   NN      L  CSKCLN LY L  + ++++
Sbjct: 171 CPEAFSLNQNGKLVGDKRVEKLERNCLSDSNNVNGFPGLGGCSKCLNSLYLLNNKKALNS 230

Query: 417 TRKSDRKSKMHSRDCELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDG 238
           ++  DR +KMH++DC+LMGLTWLL+KNRTAYIHTVTAVLRA+M+S DGS P+SC+L+SDG
Sbjct: 231 SKSEDRTTKMHNKDCQLMGLTWLLAKNRTAYIHTVTAVLRAMMMSIDGSDPRSCTLSSDG 290

Query: 237 LPLAVDSAELDDKSSSNKRLLTTSGALVHVCAIIIFVLS 121
           +PL VDS+E+     SN     +  A ++V   +I +LS
Sbjct: 291 MPLPVDSSEI-----SNNSFSISHQAPIYVTIAVICLLS 324


>ref|XP_002533130.1| conserved hypothetical protein [Ricinus communis]
           gi|223527074|gb|EEF29257.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 330

 Score =  326 bits (836), Expect = 4e-87
 Identities = 159/278 (57%), Positives = 209/278 (75%), Gaps = 7/278 (2%)
 Frame = -3

Query: 924 NLATCPLDLPDELFHGIGHACSGKNRAGQLSRSKCCPVLAAWLYSAYAGTALGRAGKMAV 745
           N+A CPLD+PDELFH +  AC   N   QL +S+CCPVLAAWLY+AY+ TALGRA ++A 
Sbjct: 53  NIAGCPLDIPDELFHSVKSACG--NGQQQLHKSRCCPVLAAWLYAAYSATALGRAARVAP 110

Query: 744 TP----YDLPILPEDSESCVDNLGKALKGRGIELRQPNETCDVVYCYCNIRLHPLSCPEA 577
                 YD+P+LP+DSE+CVD+LGKAL  +G+EL +PNETCD+VYCYC IRLHPLSC EA
Sbjct: 111 ATVAGAYDMPLLPDDSETCVDDLGKALSQKGVELVRPNETCDLVYCYCGIRLHPLSCSEA 170

Query: 576 FRVSKEGKLVGDKSVRMLENDCLNN--NKSHL-SLARCSKCLNRLYQLKEENSMDTTRKS 406
           F  ++EGKLVGDK V  LE DCL++  N +H   L  CSKCLN LY L  + ++++++  
Sbjct: 171 FSTNQEGKLVGDKRVHKLERDCLSSSTNVNHFPGLGGCSKCLNALYLLNNKKTLNSSKSD 230

Query: 405 DRKSKMHSRDCELMGLTWLLSKNRTAYIHTVTAVLRALMLSPDGSHPQSCSLASDGLPLA 226
           DR +KMH++DC+LMGLTWLL+ NRTAYIHTV+AVLRA+M++ D S+PQSC+L SDG+PLA
Sbjct: 231 DRTTKMHNKDCQLMGLTWLLATNRTAYIHTVSAVLRAMMMNVDSSNPQSCTLGSDGMPLA 290

Query: 225 VDSAELDDKSSSNKRLLTTSGALVHVCAIIIFVLSFRF 112
           VDS+E+     SN  L  T  A +++  ++I +L   F
Sbjct: 291 VDSSEI-----SNNSLSVTHQAPIYLSVVLICLLHILF 323


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