BLASTX nr result

ID: Coptis25_contig00021799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021799
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18467.3| unnamed protein product [Vitis vinifera]              103   1e-20
ref|XP_002263707.1| PREDICTED: GATA transcription factor 28-like...   103   1e-20
gb|ADG57939.1| transcription factor [Lycoris longituba]                99   3e-19
dbj|BAJ94364.1| predicted protein [Hordeum vulgare subsp. vulgare]     96   4e-18
ref|XP_003531759.1| PREDICTED: GATA transcription factor 28-like...    95   5e-18

>emb|CBI18467.3| unnamed protein product [Vitis vinifera]
          Length = 244

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/123 (50%), Positives = 74/123 (60%), Gaps = 20/123 (16%)
 Frame = -2

Query: 309 GDGDGAEGNLSDQQG------GPASTENQLTLSFHGEVYVFDSVAPEKVQAVLLLLGVCE 148
           GD     GNL+D +G      G +  +NQLTLSF G+VYVFDSV+PEKVQAVLLLLG  E
Sbjct: 3   GDVQADPGNLADSRGALTVQPGGSDNQNQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGRE 62

Query: 147 VPVSEPVSKLPAEK--------------RLESLMRFRQKRKERNFEKKIIQPARKVVTQR 10
           VP + P   +                  RL SL+RFR+KRKERNF+KKI    RK V  R
Sbjct: 63  VPPTMPALSIAGHNRELPGTPQRYNVPHRLASLIRFREKRKERNFDKKIRYTVRKEVALR 122

Query: 9   MKR 1
           M+R
Sbjct: 123 MQR 125


>ref|XP_002263707.1| PREDICTED: GATA transcription factor 28-like [Vitis vinifera]
          Length = 299

 Score =  103 bits (257), Expect = 1e-20
 Identities = 62/123 (50%), Positives = 74/123 (60%), Gaps = 20/123 (16%)
 Frame = -2

Query: 309 GDGDGAEGNLSDQQG------GPASTENQLTLSFHGEVYVFDSVAPEKVQAVLLLLGVCE 148
           GD     GNL+D +G      G +  +NQLTLSF G+VYVFDSV+PEKVQAVLLLLG  E
Sbjct: 58  GDVQADPGNLADSRGALTVQPGGSDNQNQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGRE 117

Query: 147 VPVSEPVSKLPAEK--------------RLESLMRFRQKRKERNFEKKIIQPARKVVTQR 10
           VP + P   +                  RL SL+RFR+KRKERNF+KKI    RK V  R
Sbjct: 118 VPPTMPALSIAGHNRELPGTPQRYNVPHRLASLIRFREKRKERNFDKKIRYTVRKEVALR 177

Query: 9   MKR 1
           M+R
Sbjct: 178 MQR 180


>gb|ADG57939.1| transcription factor [Lycoris longituba]
          Length = 202

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 69/115 (60%), Positives = 75/115 (65%), Gaps = 13/115 (11%)
 Frame = -2

Query: 306 DGDGAEGNL--SDQQGGPAS---TENQLTLSFHGEVYVFDSVAPEKVQAVLLLLGVCEV- 145
           DG    GN   +D QG  AS     NQLTLSF GEVYVFDSV+PEKVQAVLLLLG  EV 
Sbjct: 10  DGLSDPGNNMHADPQGALASHVGAGNQLTLSFQGEVYVFDSVSPEKVQAVLLLLGGREVI 69

Query: 144 ---PVSEPV----SKLPAEKRLESLMRFRQKRKERNFEKKIIQPARKVVTQRMKR 1
              P S  V    S LP   R+ SLMRFR+KRKERNF+KKI    RK V QRM+R
Sbjct: 70  NICPSSSHVNNKRSNLP--HRVASLMRFREKRKERNFDKKIRYTVRKEVAQRMQR 122


>dbj|BAJ94364.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 310

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 58/96 (60%), Positives = 66/96 (68%), Gaps = 9/96 (9%)
 Frame = -2

Query: 261 PASTENQLTLSFHGEVYVFDSVAPEKVQAVLLLLGVCEV--------PVSEPVSK-LPAE 109
           P +T NQLTLSF GEVYVFDSV+P+KVQAVLLLLG  E+          S P SK L   
Sbjct: 175 PPATGNQLTLSFQGEVYVFDSVSPDKVQAVLLLLGGRELNPGIGAGASSSTPYSKRLNFP 234

Query: 108 KRLESLMRFRQKRKERNFEKKIIQPARKVVTQRMKR 1
            R+ SLMRFR+KRKERNF+KKI    RK V  RM+R
Sbjct: 235 HRVASLMRFREKRKERNFDKKIRYTVRKEVALRMQR 270


>ref|XP_003531759.1| PREDICTED: GATA transcription factor 28-like [Glycine max]
          Length = 300

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 60/125 (48%), Positives = 73/125 (58%), Gaps = 22/125 (17%)
 Frame = -2

Query: 309 GDGDGAEGNLSDQ------QGGPASTENQLTLSFHGEVYVFDSVAPEKVQAVLLLLGVCE 148
           G+     GNL D       QGG +   +QLTLSF G+VYVFDSV+PEKVQAVLLLLG  E
Sbjct: 62  GEVPSNHGNLPDNHAVMMDQGGDSG--DQLTLSFQGQVYVFDSVSPEKVQAVLLLLGGRE 119

Query: 147 VPVSEPV----------------SKLPAEKRLESLMRFRQKRKERNFEKKIIQPARKVVT 16
           +P + P                  K    +RL SL+RFR+KRKERN++KKI    RK V 
Sbjct: 120 IPPTMPAMPVSPNHNNRGYTGTPQKFSVPQRLASLIRFREKRKERNYDKKIRYTVRKEVA 179

Query: 15  QRMKR 1
            RM+R
Sbjct: 180 LRMQR 184


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