BLASTX nr result
ID: Coptis25_contig00021798
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021798 (1259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 128 4e-27 gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 125 2e-26 gb|ABD96948.1| hypothetical protein [Cleome spinosa] 124 4e-26 gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 119 1e-24 emb|CAB72467.1| putative protein [Arabidopsis thaliana] 119 1e-24 >gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana] Length = 629 Score = 128 bits (321), Expect = 4e-27 Identities = 64/136 (47%), Positives = 83/136 (61%) Frame = +3 Query: 846 AFERFNIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVL 1025 A N P I I CITT +S+ +NG L G+F+ RG RQG +LSPYLFV+ +EVL Sbjct: 20 ALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALSPYLFVISMEVL 79 Query: 1026 SKFLHDGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGL 1205 SK L K HPKCK + LTHLCFADDL+I + G S++ I + + +F +GL Sbjct: 80 SKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGL 139 Query: 1206 MINTTKTTIMVGGMSD 1253 IN KTT+ G+SD Sbjct: 140 QINMEKTTLYTAGVSD 155 >gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] Length = 653 Score = 125 bits (314), Expect = 2e-26 Identities = 61/132 (46%), Positives = 87/132 (65%) Frame = +3 Query: 861 NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040 + P + I++CI+T +S+ +NG L GFFQ KRG RQG SLSPYLFVM ++VLSK L Sbjct: 147 DFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLD 206 Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220 ++K H +CK++ LTHL FADDL++ S G SI+ I + IF +GL I+ Sbjct: 207 QAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISME 266 Query: 1221 KTTIMVGGMSDD 1256 K+TI + G+++D Sbjct: 267 KSTIYLAGVTED 278 >gb|ABD96948.1| hypothetical protein [Cleome spinosa] Length = 539 Score = 124 bits (312), Expect = 4e-26 Identities = 56/133 (42%), Positives = 86/133 (64%) Frame = +3 Query: 852 ERFNIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSK 1031 + N+P+ + + +C+ TP +S+ +NG L G+F+G+RG RQGD LSPYLF+M +EVLS+ Sbjct: 64 QALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSR 123 Query: 1032 FLHDGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMI 1211 L + HPKC +THL FADD++IF+ G+ S+ + L F+ A+GL + Sbjct: 124 MLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYL 183 Query: 1212 NTTKTTIMVGGMS 1250 NT KT I + G++ Sbjct: 184 NTEKTEIFLRGLN 196 >gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1216 Score = 119 bits (299), Expect = 1e-24 Identities = 60/131 (45%), Positives = 83/131 (63%) Frame = +3 Query: 861 NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040 N P I I +C++T +SI +NG L G+F+ RG RQG SLSPYLFV+ ++VLS+ L Sbjct: 341 NFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLD 400 Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220 ++ HP+CK + LTHLCFADDL+I + G S++ I + L F A GL I Sbjct: 401 KAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICME 460 Query: 1221 KTTIMVGGMSD 1253 KTT+ + G+SD Sbjct: 461 KTTLYLAGVSD 471 >emb|CAB72467.1| putative protein [Arabidopsis thaliana] Length = 762 Score = 119 bits (299), Expect = 1e-24 Identities = 61/130 (46%), Positives = 83/130 (63%) Frame = +3 Query: 861 NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040 + P+ I I +CITTP +S+ +NG L GFFQ RG RQG +LSPYLFV+ ++VLSK L Sbjct: 173 HFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLD 232 Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220 + I HP CK++ LTHL FADDL+I + G SI I + +F+ +GL I+ Sbjct: 233 KVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISME 292 Query: 1221 KTTIMVGGMS 1250 K+TI G+S Sbjct: 293 KSTIFSAGLS 302