BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021798
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal...   128   4e-27
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             125   2e-26
gb|ABD96948.1| hypothetical protein [Cleome spinosa]                  124   4e-26
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   119   1e-24
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               119   1e-24

>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
          Length = 629

 Score =  128 bits (321), Expect = 4e-27
 Identities = 64/136 (47%), Positives = 83/136 (61%)
 Frame = +3

Query: 846  AFERFNIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVL 1025
            A    N P   I  I  CITT  +S+ +NG L G+F+  RG RQG +LSPYLFV+ +EVL
Sbjct: 20   ALSAMNFPGEFIHWISRCITTTSFSVQVNGELAGYFRSARGIRQGCALSPYLFVISMEVL 79

Query: 1026 SKFLHDGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGL 1205
            SK L      K    HPKCK + LTHLCFADDL+I + G   S++ I + + +F   +GL
Sbjct: 80   SKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRSVDGIVEVMNLFAKRSGL 139

Query: 1206 MINTTKTTIMVGGMSD 1253
             IN  KTT+   G+SD
Sbjct: 140  QINMEKTTLYTAGVSD 155


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  125 bits (314), Expect = 2e-26
 Identities = 61/132 (46%), Positives = 87/132 (65%)
 Frame = +3

Query: 861  NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040
            + P   +  I++CI+T  +S+ +NG L GFFQ KRG RQG SLSPYLFVM ++VLSK L 
Sbjct: 147  DFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLD 206

Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220
               ++K    H +CK++ LTHL FADDL++ S G   SI+ I +   IF   +GL I+  
Sbjct: 207  QAASAKKFGYHSRCKELSLTHLSFADDLMVLSDGKVRSIDGIVEVFDIFAKFSGLKISME 266

Query: 1221 KTTIMVGGMSDD 1256
            K+TI + G+++D
Sbjct: 267  KSTIYLAGVTED 278


>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score =  124 bits (312), Expect = 4e-26
 Identities = 56/133 (42%), Positives = 86/133 (64%)
 Frame = +3

Query: 852  ERFNIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSK 1031
            +  N+P+  +  + +C+ TP +S+ +NG L G+F+G+RG RQGD LSPYLF+M +EVLS+
Sbjct: 64   QALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRGLRQGDPLSPYLFIMSMEVLSR 123

Query: 1032 FLHDGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMI 1211
             L        +  HPKC    +THL FADD++IF+ G+  S+  +   L  F+ A+GL +
Sbjct: 124  MLDRCAAESRLSLHPKCHSPVITHLAFADDIMIFTSGETRSLLEVKNTLDSFSRASGLYL 183

Query: 1212 NTTKTTIMVGGMS 1250
            NT KT I + G++
Sbjct: 184  NTEKTEIFLRGLN 196


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  119 bits (299), Expect = 1e-24
 Identities = 60/131 (45%), Positives = 83/131 (63%)
 Frame = +3

Query: 861  NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040
            N P   I  I +C++T  +SI +NG L G+F+  RG RQG SLSPYLFV+ ++VLS+ L 
Sbjct: 341  NFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISMDVLSRMLD 400

Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220
                ++    HP+CK + LTHLCFADDL+I + G   S++ I + L  F A  GL I   
Sbjct: 401  KAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQFAAKLGLKICME 460

Query: 1221 KTTIMVGGMSD 1253
            KTT+ + G+SD
Sbjct: 461  KTTLYLAGVSD 471


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  119 bits (299), Expect = 1e-24
 Identities = 61/130 (46%), Positives = 83/130 (63%)
 Frame = +3

Query: 861  NIPQRMID*ILICITTPHYSILLNGSLEGFFQGKRGHRQGDSLSPYLFVMVIEVLSKFLH 1040
            + P+  I  I +CITTP +S+ +NG L GFFQ  RG RQG +LSPYLFV+ ++VLSK L 
Sbjct: 173  HFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMDVLSKLLD 232

Query: 1041 DGINSKTIKPHPKCKKIQLTHLCFADDLLIFSKGDFESINSINQKLQIFTAATGLMINTT 1220
              +    I  HP CK++ LTHL FADDL+I + G   SI  I +   +F+  +GL I+  
Sbjct: 233  KVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWSGLKISME 292

Query: 1221 KTTIMVGGMS 1250
            K+TI   G+S
Sbjct: 293  KSTIFSAGLS 302