BLASTX nr result

ID: Coptis25_contig00021770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021770
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]...   181   4e-44
ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera] ...   176   1e-42
emb|CAN60576.1| hypothetical protein VITISV_034772 [Vitis vinifera]   176   1e-42
ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42

>ref|XP_002529753.1| biotin synthase, putative [Ricinus communis]
           gi|223530751|gb|EEF32619.1| biotin synthase, putative
           [Ricinus communis]
          Length = 375

 Score =  181 bits (460), Expect = 4e-44
 Identities = 88/109 (80%), Positives = 100/109 (91%)
 Frame = -2

Query: 336 TPLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEK 157
           TPLE+QKPVEIWEMIRMIATARI+MPKAMVRLSAGRVRFS++EQALCFL+GANSIF+GEK
Sbjct: 267 TPLEDQKPVEIWEMIRMIATARIIMPKAMVRLSAGRVRFSIAEQALCFLSGANSIFTGEK 326

Query: 156 LLTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 10
           LLTTPNNDFDADQ+MFK+LGL PKAP F E+ + A E E C+EAVS+ G
Sbjct: 327 LLTTPNNDFDADQLMFKLLGLIPKAPSFPEDEERALESENCQEAVSSSG 375


>ref|XP_002263125.1| PREDICTED: biotin synthase [Vitis vinifera]
           gi|297743757|emb|CBI36640.3| unnamed protein product
           [Vitis vinifera]
          Length = 381

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/109 (78%), Positives = 95/109 (87%)
 Frame = -2

Query: 336 TPLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEK 157
           TPLE+QKPVEIWEM+RMIATARIVMPKAMVRLSAGRVRFS+ EQALCFLAGANSIF+G+K
Sbjct: 273 TPLEDQKPVEIWEMVRMIATARIVMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFTGDK 332

Query: 156 LLTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 10
           LLTTPNNDFDADQ MFK+LGL PKAP F E+     E E C++AVS  G
Sbjct: 333 LLTTPNNDFDADQQMFKLLGLIPKAPSFDEDVAKTSEAENCEQAVSGSG 381


>emb|CAN60576.1| hypothetical protein VITISV_034772 [Vitis vinifera]
          Length = 216

 Score =  176 bits (447), Expect = 1e-42
 Identities = 86/109 (78%), Positives = 95/109 (87%)
 Frame = -2

Query: 336 TPLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEK 157
           TPLE+QKPVEIWEM+RMIATARIVMPKAMVRLSAGRVRFS+ EQALCFLAGANSIF+G+K
Sbjct: 108 TPLEDQKPVEIWEMVRMIATARIVMPKAMVRLSAGRVRFSVPEQALCFLAGANSIFTGDK 167

Query: 156 LLTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA*G 10
           LLTTPNNDFDADQ MFK+LGL PKAP F E+     E E C++AVS  G
Sbjct: 168 LLTTPNNDFDADQQMFKLLGLIPKAPSFDEDVAKTSEAENCEQAVSGSG 216


>ref|XP_002310445.1| predicted protein [Populus trichocarpa] gi|222853348|gb|EEE90895.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score =  175 bits (444), Expect = 3e-42
 Identities = 89/109 (81%), Positives = 97/109 (88%), Gaps = 2/109 (1%)
 Frame = -2

Query: 336 TPLENQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCFLAGANSIFSGEK 157
           TPL+ QKPVEIWEMIRMI +ARIVMPKAMVRLSAGRV FSM+EQALCFLAGANSIF+GEK
Sbjct: 271 TPLQEQKPVEIWEMIRMIGSARIVMPKAMVRLSAGRVSFSMAEQALCFLAGANSIFTGEK 330

Query: 156 LLTTPNNDFDADQMMFKVLGLTPKAPKFS--EETKSAFEGERCKEAVSA 16
           LLTTPNND+DADQ+MFKVLGL PKAP FS  EE   A E ERC+EAVS+
Sbjct: 331 LLTTPNNDYDADQLMFKVLGLIPKAPSFSADEEKACACEAERCQEAVSS 379


>ref|XP_002327854.1| predicted protein [Populus trichocarpa] gi|222837263|gb|EEE75642.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score =  174 bits (441), Expect = 7e-42
 Identities = 91/121 (75%), Positives = 99/121 (81%), Gaps = 12/121 (9%)
 Frame = -2

Query: 336 TPLENQK------------PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMSEQALCF 193
           TPL+ QK            PVEIWEMIRMI TARIVMPKAMVRLSAGRVRFSMSEQALCF
Sbjct: 271 TPLQEQKVLLIPVSYKFSMPVEIWEMIRMIGTARIVMPKAMVRLSAGRVRFSMSEQALCF 330

Query: 192 LAGANSIFSGEKLLTTPNNDFDADQMMFKVLGLTPKAPKFSEETKSAFEGERCKEAVSA* 13
           LAGANSIF+GEKLLTTPNND+DADQ+MFKVLGL PKAP FS E + A E E+C+EAVS+ 
Sbjct: 331 LAGANSIFTGEKLLTTPNNDYDADQLMFKVLGLIPKAPSFSGEEEKACEAEQCQEAVSSS 390

Query: 12  G 10
           G
Sbjct: 391 G 391


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