BLASTX nr result

ID: Coptis25_contig00021757 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021757
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB71528.1| unconventional myosin [Helianthus annuus]              224   3e-56
ref|XP_002303100.1| predicted protein [Populus trichocarpa] gi|2...   219   7e-55
emb|CBI37226.3| unnamed protein product [Vitis vinifera]              218   2e-54
ref|XP_002268099.1| PREDICTED: myosin-H heavy chain [Vitis vinif...   218   2e-54
emb|CAN64632.1| hypothetical protein VITISV_040993 [Vitis vinifera]   218   2e-54

>gb|AAB71528.1| unconventional myosin [Helianthus annuus]
          Length = 1502

 Score =  224 bits (570), Expect = 3e-56
 Identities = 122/208 (58%), Positives = 147/208 (70%)
 Frame = +2

Query: 272  VPPVLIRKIFTQIFS*INVQLFNSLLLRRECYSFSNGEYLKSGLDELKLWCS*AKEEYAG 451
            VPP++++KIFTQIFS INVQLFNSLLLRREC +FSNGEY+K+GL EL+LWC  AKEEYAG
Sbjct: 1316 VPPIIVQKIFTQIFSYINVQLFNSLLLRRECCTFSNGEYVKAGLAELELWCCQAKEEYAG 1375

Query: 452  STWDEVKHIRQAVVFLVIQQKSKIFYDEIISDIFPIFSVDQLNIICTLYWDDKFNTRSVS 631
            S WDE+KHIRQAV FLVI QK +I YDEII+D+ PI SV QL  ICTLYWDD +NTRSVS
Sbjct: 1376 SAWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSVQQLYRICTLYWDDNYNTRSVS 1435

Query: 632  PLVISRITILMADYFNDAPSNSFLLDDNSRLNSFLVINKLLDFF**VAHKAVFLCLGMIY 811
            P VIS + ILM +  N+A S+SFLLDDNS +                     F    +  
Sbjct: 1436 PDVISSMRILMTEDSNNAASSSFLLDDNSSI--------------------PFSVDDLSS 1475

Query: 812  PIPCQKRTSLTPNLQELLENPAFQFLQE 895
             +  ++ + + P + EL ENPAFQFL E
Sbjct: 1476 SLQVKEFSDVKPAV-ELAENPAFQFLHE 1502


>ref|XP_002303100.1| predicted protein [Populus trichocarpa] gi|222844826|gb|EEE82373.1|
            predicted protein [Populus trichocarpa]
          Length = 1513

 Score =  219 bits (558), Expect = 7e-55
 Identities = 124/210 (59%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
 Frame = +2

Query: 272  VPPVLIRKIFTQIFS*INVQLFNSLLLRRECYSFSNGEYLKSGLDELKLWCS*AKEEYAG 451
            VPPVLI+KI+TQ FS INVQLFNSLLLRREC +FSNGEY+KSGL EL+LW + AKEEYAG
Sbjct: 1327 VPPVLIQKIYTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWSAQAKEEYAG 1386

Query: 452  STWDEVKHIRQAVVFLVIQQKSKIFYDEIISDIFPIFSVDQLNIICTLYWDDKFNTRSVS 631
            S+WDE+KHIRQAV FLVI QK +I YDEI +D+ PI SV QL  ICTLYWDD +NTRSVS
Sbjct: 1387 SSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDDNYNTRSVS 1446

Query: 632  PLVISRITILMADYFNDAPSNSFLLDDNSRLNSFL--VINKLLDFF**VAHKAVFLCLGM 805
            P VIS + +LM +  N A SNSFLLDDNS +   +  + N L                  
Sbjct: 1447 PGVISSMRVLMTEDSNSAVSNSFLLDDNSGIPFSVDDLSNSLQ----------------- 1489

Query: 806  IYPIPCQKRTSLTPNLQELLENPAFQFLQE 895
                  +K        +ELLENPAFQFL E
Sbjct: 1490 ------EKDFMDVQPAEELLENPAFQFLHE 1513


>emb|CBI37226.3| unnamed protein product [Vitis vinifera]
          Length = 1540

 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/208 (57%), Positives = 145/208 (69%)
 Frame = +2

Query: 272  VPPVLIRKIFTQIFS*INVQLFNSLLLRRECYSFSNGEYLKSGLDELKLWCS*AKEEYAG 451
            VPP+L+ KIFTQ FS INVQLFNSLLLRREC +FSNGEY+KSGL EL+LWC+ AKEEYAG
Sbjct: 1354 VPPILVEKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCAQAKEEYAG 1413

Query: 452  STWDEVKHIRQAVVFLVIQQKSKIFYDEIISDIFPIFSVDQLNIICTLYWDDKFNTRSVS 631
            S+WDE+KHIRQAV FLVI QK +I YDEI +D+ PI SV QL  ICTLYWD  +NTRSVS
Sbjct: 1414 SSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDSNYNTRSVS 1473

Query: 632  PLVISRITILMADYFNDAPSNSFLLDDNSRLNSFLVINKLLDFF**VAHKAVFLCLGMIY 811
            P VIS + +LM +  N+A S+SFLLD+NS +                     F    +  
Sbjct: 1474 PDVISSMRVLMTEDSNNAVSSSFLLDENSSI--------------------PFSVDDLSN 1513

Query: 812  PIPCQKRTSLTPNLQELLENPAFQFLQE 895
             +  +  T + P  +ELL+N AFQFLQE
Sbjct: 1514 SLQEKDFTDVKP-AEELLDNSAFQFLQE 1540


>ref|XP_002268099.1| PREDICTED: myosin-H heavy chain [Vitis vinifera]
          Length = 1518

 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/208 (57%), Positives = 145/208 (69%)
 Frame = +2

Query: 272  VPPVLIRKIFTQIFS*INVQLFNSLLLRRECYSFSNGEYLKSGLDELKLWCS*AKEEYAG 451
            VPP+L+ KIFTQ FS INVQLFNSLLLRREC +FSNGEY+KSGL EL+LWC+ AKEEYAG
Sbjct: 1332 VPPILVEKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCAQAKEEYAG 1391

Query: 452  STWDEVKHIRQAVVFLVIQQKSKIFYDEIISDIFPIFSVDQLNIICTLYWDDKFNTRSVS 631
            S+WDE+KHIRQAV FLVI QK +I YDEI +D+ PI SV QL  ICTLYWD  +NTRSVS
Sbjct: 1392 SSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDSNYNTRSVS 1451

Query: 632  PLVISRITILMADYFNDAPSNSFLLDDNSRLNSFLVINKLLDFF**VAHKAVFLCLGMIY 811
            P VIS + +LM +  N+A S+SFLLD+NS +                     F    +  
Sbjct: 1452 PDVISSMRVLMTEDSNNAVSSSFLLDENSSI--------------------PFSVDDLSN 1491

Query: 812  PIPCQKRTSLTPNLQELLENPAFQFLQE 895
             +  +  T + P  +ELL+N AFQFLQE
Sbjct: 1492 SLQEKDFTDVKP-AEELLDNSAFQFLQE 1518


>emb|CAN64632.1| hypothetical protein VITISV_040993 [Vitis vinifera]
          Length = 1477

 Score =  218 bits (555), Expect = 2e-54
 Identities = 120/208 (57%), Positives = 145/208 (69%)
 Frame = +2

Query: 272  VPPVLIRKIFTQIFS*INVQLFNSLLLRRECYSFSNGEYLKSGLDELKLWCS*AKEEYAG 451
            VPP+L+ KIFTQ FS INVQLFNSLLLRREC +FSNGEY+KSGL EL+LWC+ AKEEYAG
Sbjct: 1291 VPPILVEKIFTQTFSYINVQLFNSLLLRRECCTFSNGEYVKSGLAELELWCAQAKEEYAG 1350

Query: 452  STWDEVKHIRQAVVFLVIQQKSKIFYDEIISDIFPIFSVDQLNIICTLYWDDKFNTRSVS 631
            S+WDE+KHIRQAV FLVI QK +I YDEI +D+ PI SV QL  ICTLYWD  +NTRSVS
Sbjct: 1351 SSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDSNYNTRSVS 1410

Query: 632  PLVISRITILMADYFNDAPSNSFLLDDNSRLNSFLVINKLLDFF**VAHKAVFLCLGMIY 811
            P VIS + +LM +  N+A S+SFLLD+NS +                     F    +  
Sbjct: 1411 PDVISSMRVLMTEDSNNAVSSSFLLDENSSI--------------------PFSVDDLSN 1450

Query: 812  PIPCQKRTSLTPNLQELLENPAFQFLQE 895
             +  +  T + P  +ELL+N AFQFLQE
Sbjct: 1451 SLQEKDFTDVKP-AEELLDNSAFQFLQE 1477


Top