BLASTX nr result

ID: Coptis25_contig00021747 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021747
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32503.3| unnamed protein product [Vitis vinifera]               58   9e-07
ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    57   3e-06
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    57   3e-06

>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 4/130 (3%)
 Frame = +3

Query: 189 DDTFHVKNKESPQESSSYFLSRGVQSNGEGTRNNKGLGVNSHCTMQEKKTGGSSILGLEP 368
           DD+  +    SP    S      +     G   N+ L +       +     S  +G++ 
Sbjct: 152 DDSVEILGSASPVSLRSKVFDECIDQQPLGKNYNENLHLAKDANSLQVTIRSSRDIGIQF 211

Query: 369 SAELVSGTR----RPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVRGRYLLNISNRFA 536
           ++  ++ +     R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA
Sbjct: 212 NSSELTNSECKRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFA 271

Query: 537 RRYLKGDAPF 566
            +YL G + F
Sbjct: 272 EKYLNGVSKF 281


>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +3

Query: 360 LEPSAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVRGRYLLNISNRFAR 539
           L+ SAE      R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA 
Sbjct: 265 LKTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAE 324

Query: 540 RYLKGDAPF 566
           +YL G + F
Sbjct: 325 KYLNGVSKF 333


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 29/69 (42%), Positives = 43/69 (62%)
 Frame = +3

Query: 360 LEPSAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVRGRYLLNISNRFAR 539
           L+ SAE      R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA 
Sbjct: 421 LKTSAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAE 480

Query: 540 RYLKGDAPF 566
           +YL G + F
Sbjct: 481 KYLNGVSKF 489


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