BLASTX nr result

ID: Coptis25_contig00021742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021742
         (829 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]   176   4e-42
ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253...   176   6e-42
ref|XP_002521862.1| conserved hypothetical protein [Ricinus comm...   145   1e-32
ref|XP_002282303.1| PREDICTED: uncharacterized protein LOC100243...   143   4e-32
ref|XP_002313839.1| predicted protein [Populus trichocarpa] gi|2...   143   4e-32

>emb|CAN63485.1| hypothetical protein VITISV_017086 [Vitis vinifera]
          Length = 366

 Score =  176 bits (447), Expect = 4e-42
 Identities = 102/211 (48%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
 Frame = -2

Query: 663 IVVPVSSTDFNFDSACSSPYISAPSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXX 484
           +V+PV + DFNFDSACS+P+ISAPSSP+RFG ++FSAPTSPSR S FYR+FN+F+F    
Sbjct: 5   VVIPVPAVDFNFDSACSTPFISAPSSPQRFG-NFFSAPTSPSRASAFYREFNDFNF---- 59

Query: 483 XXXXXXXXXXXXSVIPYDWEEKPGTPKGNNTERNXXXXXXXXXXXXXXXXXXFSGQLDRD 304
                       SVIP+DWEEKPG PK                          SGQL+R 
Sbjct: 60  --SGRDSSASAASVIPFDWEEKPGIPKVKTAATRSTTRDEDDDDQDFAFDF--SGQLERT 115

Query: 303 SLTADELFDGGKIKPLKPPPRLQLSSNDYGTQKXXXXXXXXXXXXXSQGKKMIREAFSPK 124
           SL+ADELFDGGKI+PL+PPPRLQLS N+                   +  +  +  FSP+
Sbjct: 116 SLSADELFDGGKIRPLRPPPRLQLSYNN-------PDENFKSAISSPKSPRSPKNIFSPR 168

Query: 123 QRKDVDPFAVAIEQSRQGVVLEQQ--RGRER 37
            RKD DPFA AIE++R+    E Q  RGRER
Sbjct: 169 HRKDTDPFAAAIERTRKEAGTEPQYHRGRER 199


>ref|XP_002281981.1| PREDICTED: uncharacterized protein LOC100253812 [Vitis vinifera]
          Length = 365

 Score =  176 bits (446), Expect = 6e-42
 Identities = 102/211 (48%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
 Frame = -2

Query: 663 IVVPVSSTDFNFDSACSSPYISAPSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXX 484
           +V+PV + DFNFDSACS+P+ISAPSSP+RFG  +FSAPTSPSR S FYR+FN+F+F    
Sbjct: 5   VVIPVPAVDFNFDSACSTPFISAPSSPQRFGS-FFSAPTSPSRASAFYREFNDFNF---- 59

Query: 483 XXXXXXXXXXXXSVIPYDWEEKPGTPKGNNTERNXXXXXXXXXXXXXXXXXXFSGQLDRD 304
                       SVIP+DWEEKPG PK                          SGQL+R 
Sbjct: 60  --SGRDSSASAASVIPFDWEEKPGIPKVKTAATRSTTRDEDDDDQDFAFDF--SGQLERT 115

Query: 303 SLTADELFDGGKIKPLKPPPRLQLSSNDYGTQKXXXXXXXXXXXXXSQGKKMIREAFSPK 124
           SL+ADELFDGGKI+PL+PPPRLQLS N+                   +  +  +  FSP+
Sbjct: 116 SLSADELFDGGKIRPLRPPPRLQLSYNN-------PDENFKSAISSPKSPRSPKNIFSPR 168

Query: 123 QRKDVDPFAVAIEQSRQGVVLEQQ--RGRER 37
            RKD DPFA AIE++R+    E Q  RGRER
Sbjct: 169 HRKDTDPFAAAIERTRKEAGTEPQYHRGRER 199


>ref|XP_002521862.1| conserved hypothetical protein [Ricinus communis]
           gi|223538900|gb|EEF40498.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 382

 Score =  145 bits (365), Expect = 1e-32
 Identities = 88/215 (40%), Positives = 114/215 (53%), Gaps = 1/215 (0%)
 Frame = -2

Query: 678 LAMEVIV-VPVSSTDFNFDSACSSPYISAPSSPKRFGEHYFSAPTSPSRVSVFYRDFNNF 502
           + MEV+V VP    DFNFDS CSSPY++APSSP+RFG  + SAPTSP+R S F+R+ N+ 
Sbjct: 1   MEMEVVVAVPPVPVDFNFDSTCSSPYMTAPSSPQRFGNFFSSAPTSPTRSSSFFRELNDV 60

Query: 501 SFIDXXXXXXXXXXXXXXSVIPYDWEEKPGTPKGNNTERNXXXXXXXXXXXXXXXXXXFS 322
           S                   IP+DWEEKPGTPK      +                  FS
Sbjct: 61  SLATNSSS------------IPFDWEEKPGTPKARKNTNH--DSEDFDFIDDGDFEFDFS 106

Query: 321 GQLDRDSLTADELFDGGKIKPLKPPPRLQLSSNDYGTQKXXXXXXXXXXXXXSQGKKMIR 142
           GQLDR SL+ADELFDGGKI+PLKPPP    S +                      +    
Sbjct: 107 GQLDRTSLSADELFDGGKIRPLKPPPGYDSSVS--------------------SPRSSSP 146

Query: 141 EAFSPKQRKDVDPFAVAIEQSRQGVVLEQQRGRER 37
            + + +++KD DPF  AIE++ +    EQQ+ +ER
Sbjct: 147 RSRNAQKKKDFDPFRAAIEETTRREAKEQQQNQER 181


>ref|XP_002282303.1| PREDICTED: uncharacterized protein LOC100243808 [Vitis vinifera]
          Length = 357

 Score =  143 bits (361), Expect = 4e-32
 Identities = 88/211 (41%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
 Frame = -2

Query: 663 IVVPVSSTDFNFDSACSSPYISAPSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXX 484
           +++PV+S DF+F    SS ++S PS+PKR G +YFSAPTSPSR+S  YRDF++FS     
Sbjct: 5   VMIPVASMDFDFTHVDSSGHLSCPSTPKRLGSYYFSAPTSPSRLSEIYRDFDHFSSTKSN 64

Query: 483 XXXXXXXXXXXXSVIPYDWEEKPGTPKGNNTERNXXXXXXXXXXXXXXXXXXFSGQLDRD 304
                         +P+DWEEKPGTPK ++                      FS +L++ 
Sbjct: 65  GSPPR---------VPFDWEEKPGTPKSSS--------KVVTANKDDDFAFDFSEELEKA 107

Query: 303 SLTADELFDGGKIKPLKPPPRLQLSSND--YGTQKXXXXXXXXXXXXXSQGKKMIREAFS 130
           SL+A+ELFDGGKI+PLKPPP LQL +      T+K              +GK ++REAFS
Sbjct: 108 SLSAEELFDGGKIRPLKPPPGLQLGAGAEVLSTRK---PPLSSSRSPVLRGKSIVREAFS 164

Query: 129 PKQRKDVDPFAVAIEQSRQGVVLEQQRGRER 37
           P++ K+VD    A +  R+    EQ+RGRER
Sbjct: 165 PRKNKNVD---AAADFPRR---TEQERGRER 189


>ref|XP_002313839.1| predicted protein [Populus trichocarpa] gi|222850247|gb|EEE87794.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  143 bits (361), Expect = 4e-32
 Identities = 92/222 (41%), Positives = 113/222 (50%), Gaps = 13/222 (5%)
 Frame = -2

Query: 663 IVVPVSSTDFNFDSACSSPYISAPSSPKRFGEHYFSAPTSPSRVSVFYRDFNNFSFIDXX 484
           IV+PV   DFNFDS CSSPY++APSSP+RFG   FSAPTSP+R+S FYR+ N+ +     
Sbjct: 5   IVMPVPPVDFNFDSTCSSPYMTAPSSPQRFGNLLFSAPTSPTRMSSFYRELNDITL---- 60

Query: 483 XXXXXXXXXXXXSVIPYDWEEKPGTPKGNNTERNXXXXXXXXXXXXXXXXXXFSGQLDRD 304
                       S IP+DW +KPGTPK  N   +                  FSGQL+R 
Sbjct: 61  -------STNSSSTIPFDWGKKPGTPKSKNQSEDNNKNDGDLDDYNEDFEFDFSGQLERT 113

Query: 303 SLTADELFDGGKIKPLKPPPRLQLSSNDYGTQKXXXXXXXXXXXXXSQGKKMIREAFSPK 124
           SL+A+ELFDGGKIKPLKPPP    S +                          R   SP+
Sbjct: 114 SLSAEELFDGGKIKPLKPPPGYDSSVSS------------------------PRSPRSPR 149

Query: 123 QR----KDVDPFAVAIEQSRQGVVLEQ---------QRGRER 37
            R    K+ DPF  AIE++ +G V  Q         QRGR R
Sbjct: 150 SRATKKKEFDPFQAAIEETCRGEVKLQINQQGQAPHQRGRGR 191


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