BLASTX nr result
ID: Coptis25_contig00021740
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021740
(748 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15896.3| unnamed protein product [Vitis vinifera] 294 1e-77
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi... 294 1e-77
ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2... 278 7e-73
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi... 270 2e-70
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,... 264 2e-68
>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 294 bits (753), Expect = 1e-77
Identities = 135/219 (61%), Positives = 175/219 (79%)
Frame = +3
Query: 87 STKDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCT 266
S K+ HSAL++FDSVT + P + HTP+ FHHIL+RL D KL H+ RIV+LI+TQ+CKC
Sbjct: 19 SEKNPHSALSIFDSVT-RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP 77
Query: 267 EDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF 446
ED+ALTVIK Y+ N M ALDIF+ M+++FGC+PGIRSYN LLN+ ++ N++D+AESFF
Sbjct: 78 EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137
Query: 447 MYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKN 626
+YFETMG+ PNL+TYN+L+KI +K +F+KAKEL +WM G PD+FSYGT+IN L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197
Query: 627 GKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFV 743
G + D L++FDEM RG+ PDV CYNILIDGFFK GD +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236
Score = 82.4 bits (202), Expect = 9e-14
Identities = 48/162 (29%), Positives = 81/162 (50%)
Frame = +3
Query: 255 CKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKA 434
CK + VI + AL F NM GC P + +YN L+N K + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518
Query: 435 ESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVING 614
+ G PN+ TY++L+ + + + A L+ G +PD+ + +I+G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 615 LVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDF 740
L +GK+ D L+++ EM R +P++V +N L++GF+K DF
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620
Score = 81.6 bits (200), Expect = 2e-13
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = +3
Query: 282 TVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEY-DKAESFFMYFE 458
T+I + + N AL +F M + G P + YN L++ F K + + +E + +
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 459 TMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLF 638
+ PN+ +YNV++ K +F+++ E++ M+ N DL++Y T+I+GL +G L
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 639 DGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
++ EM G+ PDVV YN +++G+ +AG
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Score = 75.5 bits (184), Expect = 1e-11
Identities = 40/125 (32%), Positives = 64/125 (51%)
Frame = +3
Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
GCKP N ++N FV+ ++ + A FF + G P + TYN L+ K F +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518
Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
L M G +P++ +Y ++NGL + KL L ++ + +G PDV +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 720 FFKAG 734
+G
Sbjct: 579 LCSSG 583
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/120 (30%), Positives = 63/120 (52%)
Frame = +3
Query: 369 PGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKEL 548
P I SYN ++N KC ++D++ + + +L TY+ L+ + A +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 549 FDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFK 728
+ M NG+ PD+ Y T++NG ++ G++ + LE++ M G VV YNILI G F+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 371
>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 294 bits (753), Expect = 1e-77
Identities = 135/219 (61%), Positives = 175/219 (79%)
Frame = +3
Query: 87 STKDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCT 266
S K+ HSAL++FDSVT + P + HTP+ FHHIL+RL D KL H+ RIV+LI+TQ+CKC
Sbjct: 19 SEKNPHSALSIFDSVT-RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP 77
Query: 267 EDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF 446
ED+ALTVIK Y+ N M ALDIF+ M+++FGC+PGIRSYN LLN+ ++ N++D+AESFF
Sbjct: 78 EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137
Query: 447 MYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKN 626
+YFETMG+ PNL+TYN+L+KI +K +F+KAKEL +WM G PD+FSYGT+IN L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197
Query: 627 GKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFV 743
G + D L++FDEM RG+ PDV CYNILIDGFFK GD +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236
Score = 82.4 bits (202), Expect = 9e-14
Identities = 48/162 (29%), Positives = 81/162 (50%)
Frame = +3
Query: 255 CKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKA 434
CK + VI + AL F NM GC P + +YN L+N K + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518
Query: 435 ESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVING 614
+ G PN+ TY++L+ + + + A L+ G +PD+ + +I+G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 615 LVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDF 740
L +GK+ D L+++ EM R +P++V +N L++GF+K DF
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620
Score = 81.6 bits (200), Expect = 2e-13
Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
Frame = +3
Query: 282 TVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEY-DKAESFFMYFE 458
T+I + + N AL +F M + G P + YN L++ F K + + +E + +
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247
Query: 459 TMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLF 638
+ PN+ +YNV++ K +F+++ E++ M+ N DL++Y T+I+GL +G L
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307
Query: 639 DGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
++ EM G+ PDVV YN +++G+ +AG
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339
Score = 75.5 bits (184), Expect = 1e-11
Identities = 40/125 (32%), Positives = 64/125 (51%)
Frame = +3
Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
GCKP N ++N FV+ ++ + A FF + G P + TYN L+ K F +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518
Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
L M G +P++ +Y ++NGL + KL L ++ + +G PDV +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578
Query: 720 FFKAG 734
+G
Sbjct: 579 LCSSG 583
Score = 72.0 bits (175), Expect = 1e-10
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
Frame = +3
Query: 294 TYSV---NYMSGHALDIFRNMYDVF---GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYF 455
TYS+ G LD+ N++ G KP ++ +N +++ + + A +
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595
Query: 456 ETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKL 635
+ VPNL T+N L++ + K +FE+A +++D + G +PD+ SY + GL ++
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRI 655
Query: 636 FDGLEMFDEMFIRGILPDVVCYNILI 713
D + ++ RG+LP + +NIL+
Sbjct: 656 SDAVGFLNDAVDRGVLPTAITWNILV 681
Score = 67.8 bits (164), Expect = 2e-09
Identities = 37/120 (30%), Positives = 63/120 (52%)
Frame = +3
Query: 369 PGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKEL 548
P I SYN ++N KC ++D++ + + +L TY+ L+ + A +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312
Query: 549 FDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFK 728
+ M NG+ PD+ Y T++NG ++ G++ + LE++ M G VV YNILI G F+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 371
>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
predicted protein [Populus trichocarpa]
Length = 694
Score = 278 bits (712), Expect = 7e-73
Identities = 130/218 (59%), Positives = 170/218 (77%)
Frame = +3
Query: 93 KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTED 272
K SAL LFDS + Q P + H+P F ILRRL+D KL H+ RIV+LI+TQ+CKCTED
Sbjct: 21 KSPKSALALFDSASRQ-PGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTED 79
Query: 273 IALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMY 452
+ LTV+K Y+ + M ALD F+ M ++FGCKPGIRSYN LLN+F++ N +KAESF Y
Sbjct: 80 VVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAY 139
Query: 453 FETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGK 632
FET+G++PNL+TYN+L+KI VKK +F +AK L DWM ++PD++SYGTVING+VK+G
Sbjct: 140 FETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGD 199
Query: 633 LFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
L LE+FDEMF RG++PDV+CYNI+IDGFFK GD+V+
Sbjct: 200 LVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQ 237
Score = 85.5 bits (210), Expect = 1e-14
Identities = 46/138 (33%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMV-PNLETYNVL 500
AL++F M++ G P + YN +++ F K +Y + + + V PN+ TYNV+
Sbjct: 203 ALEVFDEMFER-GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVM 261
Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
+ K F+++ E+++ M+ N E DLF+Y ++I GL G + +E++ EM R +
Sbjct: 262 INGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSV 321
Query: 681 LPDVVCYNILIDGFFKAG 734
+ DVV YN L++GF +AG
Sbjct: 322 VVDVVTYNALLNGFCRAG 339
Score = 78.2 bits (191), Expect = 2e-12
Identities = 43/137 (31%), Positives = 71/137 (51%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
AL I M D +GC+ N L+N FV+ ++ ++A FF ET G P + +YN L+
Sbjct: 448 ALGIVHQM-DKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLI 506
Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
K F A M +PD+ +Y +++GL + K+ L ++ ++ ++G+
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566
Query: 684 PDVVCYNILIDGFFKAG 734
PDV +NIL+ G AG
Sbjct: 567 PDVTMHNILMHGLCSAG 583
Score = 76.6 bits (187), Expect = 5e-12
Identities = 41/137 (29%), Positives = 70/137 (51%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
AL+++R + V G +P + +N L++ + + A + + +PNL T+N L+
Sbjct: 553 ALNLWRQVL-VKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611
Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
K E E A ++ M NG +PD+ SY + GL G++ DG+ +FD+ GIL
Sbjct: 612 DGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671
Query: 684 PDVVCYNILIDGFFKAG 734
P + + IL+ K G
Sbjct: 672 PTSITWYILVRAVLKLG 688
Score = 75.9 bits (185), Expect = 8e-12
Identities = 46/168 (27%), Positives = 81/168 (48%)
Frame = +3
Query: 228 IVKLIQTQECKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSF 407
IV + C+ + + +I + A+ FR M + GC P + SYN L+N
Sbjct: 451 IVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGL 509
Query: 408 VKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDL 587
K + A SF P++ TY++L+ + + + A L+ + G+EPD+
Sbjct: 510 CKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDV 569
Query: 588 FSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKA 731
+ +++GL GK+ D L ++ M LP++V +N L+DG +KA
Sbjct: 570 TMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKA 617
Score = 57.8 bits (138), Expect = 2e-06
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Frame = +3
Query: 381 SYNCLLNSFVKCNEYDKAESFFMYFETMGM--VPNLETYNVLVKIYVKKNEFEKAKELFD 554
+YN LLN F + K + F + MG N+ +YN+ ++ + + E+A +++
Sbjct: 327 TYNALLNGFCRAG---KIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWE 383
Query: 555 WMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
+R G D +YG +I+GL KNG L L++ E G D Y+ ++DG K G
Sbjct: 384 LLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQG 443
Score = 56.2 bits (134), Expect = 7e-06
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Frame = +3
Query: 315 SGH---ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLE 485
+GH AL I + D G K +Y+ +++ K D+A + G +
Sbjct: 407 NGHLNKALKILKEAKDG-GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465
Query: 486 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 665
N L+ +V+ ++ E+A F M G P + SY T+INGL K + D EM
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525
Query: 666 FIRGILPDVVCYNILIDG 719
+ PD++ Y++L+DG
Sbjct: 526 LEKDWKPDMITYSLLMDG 543
>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED:
pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 270 bits (691), Expect = 2e-70
Identities = 123/218 (56%), Positives = 163/218 (74%)
Frame = +3
Query: 93 KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTED 272
K+ ++AL +FDS Q+P + H PF FHHILRRL D KL H+ RIV L++ Q C C+ED
Sbjct: 21 KNPNAALAIFDSAC-QHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSED 79
Query: 273 IALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMY 452
+AL+ IK Y+ M AL++F+NM D+FGC PGIRS+N +LN+F++ N++ +AE FF Y
Sbjct: 80 VALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTY 139
Query: 453 FETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGK 632
F+T GM PNL+TYN+L+KI KK +FEK K L WM NG+ PD+ SYGT+IN L K+G
Sbjct: 140 FQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGN 199
Query: 633 LFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
L D +E+FDEM +RG+ PDV+CYNILIDGF + GDFVK
Sbjct: 200 LLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVK 237
Score = 85.5 bits (210), Expect = 1e-14
Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMV-PNLETYNVL 500
A+++F M V G P + YN L++ F++ ++ KA + T V P++ETYN++
Sbjct: 203 AVELFDEM-SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIM 261
Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
+ K + +++ E+++ M+ N PDLF++ ++I+GL K G ++F EM G+
Sbjct: 262 INGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGL 321
Query: 681 LPDVVCYNILIDGFFKAGDFVK 746
PDV YN ++ G F+ G K
Sbjct: 322 SPDVRTYNAMLSGLFRTGKLNK 343
Score = 70.9 bits (172), Expect = 3e-10
Identities = 44/194 (22%), Positives = 88/194 (45%)
Frame = +3
Query: 165 FTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTEDIALTVIKTYSVNYMSGHALDIFRN 344
F + ++ L + ++ ++ K + ++I Y + A+ + R
Sbjct: 430 FAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489
Query: 345 MYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKN 524
M C P + SYN ++N K + A G+ P++ TY++L+ +
Sbjct: 490 MKSK-DCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGE 548
Query: 525 EFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYN 704
+ + A L+ ++PDL + +I+GL K+ LE+F +M +PD+V +N
Sbjct: 549 KVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHN 608
Query: 705 ILIDGFFKAGDFVK 746
+++G +KAGD V+
Sbjct: 609 TIMEGLYKAGDCVE 622
Score = 65.5 bits (158), Expect = 1e-08
Identities = 32/120 (26%), Positives = 63/120 (52%)
Frame = +3
Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
G KP + +Y+ L++ + + D A + + + P+L+ +N+++ + + A
Sbjct: 529 GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVA 588
Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
E+F MR PDL ++ T++ GL K G + L+++D + G+ PD++ YNI G
Sbjct: 589 LEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648
Score = 64.3 bits (155), Expect = 3e-08
Identities = 30/116 (25%), Positives = 60/116 (51%)
Frame = +3
Query: 366 KPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKE 545
KP ++ +N +++ + D A F + VP+L T+N +++ K + +A +
Sbjct: 566 KPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALK 625
Query: 546 LFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILI 713
++D + G++PD+ SY GL ++ D +E + RGILP+ +N+L+
Sbjct: 626 IWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681
Score = 60.8 bits (146), Expect = 3e-07
Identities = 33/132 (25%), Positives = 69/132 (52%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
A +I++ + P + +YN ++N K + D++ + + P+L T++ ++
Sbjct: 238 ANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMI 297
Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
K F A+++F M +G+ PD+ +Y +++GL + GKL E+++ M +
Sbjct: 298 HGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNC 356
Query: 684 PDVVCYNILIDG 719
++V YN+LI G
Sbjct: 357 CNIVSYNMLIQG 368
Score = 58.9 bits (141), Expect = 1e-06
Identities = 35/134 (26%), Positives = 65/134 (48%)
Frame = +3
Query: 333 IFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIY 512
+F+ M + G P +R+YN +L+ + + +K + N+ +YN+L++
Sbjct: 312 VFQEMIES-GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGL 369
Query: 513 VKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDV 692
+ + E+A + + G++ D +YG +INGL KNG L L + +E G D
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429
Query: 693 VCYNILIDGFFKAG 734
Y+ ++ G K G
Sbjct: 430 FAYSSMVHGLCKKG 443
>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 701
Score = 264 bits (674), Expect = 2e-68
Identities = 126/219 (57%), Positives = 165/219 (75%), Gaps = 1/219 (0%)
Frame = +3
Query: 93 KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLT-DSKLKTHIPRIVKLIQTQECKCTE 269
K+ SAL+LF+S + N H+ FHHILRRL DS+L +H+ RIV +++ Q+C C E
Sbjct: 24 KNPLSALSLFESASR---NKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKE 80
Query: 270 DIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFM 449
D+ALTVIK Y+ N MS ALD F+NM D+FGCKPG+RSYN LLN+FV+ NE+D+AESF
Sbjct: 81 DVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSR 140
Query: 450 YFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNG 629
YFE+M + PNL+TYN+L+KI KK + EKA L DWM ++PD+FSYGT+ING+VK G
Sbjct: 141 YFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVG 200
Query: 630 KLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
L L++FDEM +RG++ DV CYN+LIDGFFK GD+ K
Sbjct: 201 DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDK 239
Score = 81.6 bits (200), Expect = 2e-13
Identities = 43/130 (33%), Positives = 71/130 (54%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
AL++++ D G KP I YN L++ + + A + + + VPNL T N L+
Sbjct: 555 ALNLWQQALDK-GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613
Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
+ K ++EKA E++D + +G+ PD+ SY I GL ++ D +E ++ RGIL
Sbjct: 614 EGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGIL 673
Query: 684 PDVVCYNILI 713
P V +NIL+
Sbjct: 674 PTAVTWNILV 683
Score = 77.0 bits (188), Expect = 4e-12
Identities = 40/138 (28%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF-MYFETMGMVPNLETYNVL 500
AL +F M V G + YN L++ F K +YDK + + + + PN+ TYN++
Sbjct: 205 ALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263
Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
+ K F+++ E+++ M N E D+F+Y ++I+GL + G + + ++ E+ +
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323
Query: 681 LPDVVCYNILIDGFFKAG 734
+ D V +N +++GF +AG
Sbjct: 324 VVDAVTHNAMLNGFCRAG 341
Score = 70.9 bits (172), Expect = 3e-10
Identities = 41/141 (29%), Positives = 71/141 (50%)
Frame = +3
Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
A++ FR M + GC P I SYN L+ K + +A SF P++ T ++L+
Sbjct: 485 AINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLM 543
Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
++ + E A L+ G +PD+ Y +++GL KL D L+++ M +
Sbjct: 544 DGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603
Query: 684 PDVVCYNILIDGFFKAGDFVK 746
P++V N L++G +K D+ K
Sbjct: 604 PNLVTRNTLMEGLYKVRDYEK 624
Score = 66.2 bits (160), Expect = 7e-09
Identities = 37/126 (29%), Positives = 61/126 (48%)
Frame = +3
Query: 342 NMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKK 521
N D G K N L+N FV+ ++ + A +FF E G P + +YN L+K K
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKA 514
Query: 522 NEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCY 701
F +A M +PD+ + +++GL + K+ L ++ + +G PD+ Y
Sbjct: 515 ERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574
Query: 702 NILIDG 719
NIL+ G
Sbjct: 575 NILMHG 580
Score = 59.3 bits (142), Expect = 8e-07
Identities = 38/127 (29%), Positives = 57/127 (44%)
Frame = +3
Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
GC+P +Y L++ K +KA F E + Y+ +V K+ ++A
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
+ + M G + D +ING V+ KL D + F EM +G P +V YN LI G
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510
Query: 720 FFKAGDF 740
KA F
Sbjct: 511 LCKAERF 517