BLASTX nr result

ID: Coptis25_contig00021740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021740
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15896.3| unnamed protein product [Vitis vinifera]              294   1e-77
ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containi...   294   1e-77
ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|2...   278   7e-73
ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70
ref|XP_002533891.1| pentatricopeptide repeat-containing protein,...   264   2e-68

>emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  294 bits (753), Expect = 1e-77
 Identities = 135/219 (61%), Positives = 175/219 (79%)
 Frame = +3

Query: 87  STKDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCT 266
           S K+ HSAL++FDSVT + P + HTP+ FHHIL+RL D KL  H+ RIV+LI+TQ+CKC 
Sbjct: 19  SEKNPHSALSIFDSVT-RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP 77

Query: 267 EDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF 446
           ED+ALTVIK Y+ N M   ALDIF+ M+++FGC+PGIRSYN LLN+ ++ N++D+AESFF
Sbjct: 78  EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 447 MYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKN 626
           +YFETMG+ PNL+TYN+L+KI  +K +F+KAKEL +WM   G  PD+FSYGT+IN L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 627 GKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFV 743
           G + D L++FDEM  RG+ PDV CYNILIDGFFK GD +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 48/162 (29%), Positives = 81/162 (50%)
 Frame = +3

Query: 255 CKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKA 434
           CK    +   VI  +        AL  F NM    GC P + +YN L+N   K   + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518

Query: 435 ESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVING 614
            +        G  PN+ TY++L+    +  + + A  L+      G +PD+  +  +I+G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 615 LVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDF 740
           L  +GK+ D L+++ EM  R  +P++V +N L++GF+K  DF
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
 Frame = +3

Query: 282 TVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEY-DKAESFFMYFE 458
           T+I + + N     AL +F  M +  G  P +  YN L++ F K  +  + +E +    +
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247

Query: 459 TMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLF 638
              + PN+ +YNV++    K  +F+++ E++  M+ N    DL++Y T+I+GL  +G L 
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 639 DGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
               ++ EM   G+ PDVV YN +++G+ +AG
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/125 (32%), Positives = 64/125 (51%)
 Frame = +3

Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
           GCKP     N ++N FV+ ++ + A  FF    + G  P + TYN L+    K   F +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
             L   M   G +P++ +Y  ++NGL +  KL   L ++ +   +G  PDV  +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 720 FFKAG 734
              +G
Sbjct: 579 LCSSG 583



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 37/120 (30%), Positives = 63/120 (52%)
 Frame = +3

Query: 369 PGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKEL 548
           P I SYN ++N   KC ++D++   +   +      +L TY+ L+         + A  +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 549 FDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFK 728
           +  M  NG+ PD+  Y T++NG ++ G++ + LE++  M   G    VV YNILI G F+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 371


>ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  294 bits (753), Expect = 1e-77
 Identities = 135/219 (61%), Positives = 175/219 (79%)
 Frame = +3

Query: 87  STKDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCT 266
           S K+ HSAL++FDSVT + P + HTP+ FHHIL+RL D KL  H+ RIV+LI+TQ+CKC 
Sbjct: 19  SEKNPHSALSIFDSVT-RFPGYSHTPYVFHHILKRLFDPKLVAHVSRIVELIRTQKCKCP 77

Query: 267 EDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF 446
           ED+ALTVIK Y+ N M   ALDIF+ M+++FGC+PGIRSYN LLN+ ++ N++D+AESFF
Sbjct: 78  EDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 447 MYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKN 626
           +YFETMG+ PNL+TYN+L+KI  +K +F+KAKEL +WM   G  PD+FSYGT+IN L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 627 GKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFV 743
           G + D L++FDEM  RG+ PDV CYNILIDGFFK GD +
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDIL 236



 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 48/162 (29%), Positives = 81/162 (50%)
 Frame = +3

Query: 255 CKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKA 434
           CK    +   VI  +        AL  F NM    GC P + +YN L+N   K   + +A
Sbjct: 460 CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSK-GCFPTVVTYNTLINGLSKAERFSEA 518

Query: 435 ESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVING 614
            +        G  PN+ TY++L+    +  + + A  L+      G +PD+  +  +I+G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 615 LVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDF 740
           L  +GK+ D L+++ EM  R  +P++V +N L++GF+K  DF
Sbjct: 579 LCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDF 620



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 46/152 (30%), Positives = 84/152 (55%), Gaps = 1/152 (0%)
 Frame = +3

Query: 282 TVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEY-DKAESFFMYFE 458
           T+I + + N     AL +F  M +  G  P +  YN L++ F K  +  + +E +    +
Sbjct: 189 TLINSLAKNGYMSDALKLFDEMPER-GVTPDVACYNILIDGFFKKGDILNASEIWERLLK 247

Query: 459 TMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLF 638
              + PN+ +YNV++    K  +F+++ E++  M+ N    DL++Y T+I+GL  +G L 
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 639 DGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
               ++ EM   G+ PDVV YN +++G+ +AG
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAG 339



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 40/125 (32%), Positives = 64/125 (51%)
 Frame = +3

Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
           GCKP     N ++N FV+ ++ + A  FF    + G  P + TYN L+    K   F +A
Sbjct: 459 GCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEA 518

Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
             L   M   G +P++ +Y  ++NGL +  KL   L ++ +   +G  PDV  +NI+I G
Sbjct: 519 YALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHG 578

Query: 720 FFKAG 734
              +G
Sbjct: 579 LCSSG 583



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 6/146 (4%)
 Frame = +3

Query: 294 TYSV---NYMSGHALDIFRNMYDVF---GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYF 455
           TYS+       G  LD+  N++      G KP ++ +N +++      + + A   +   
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 456 ETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKL 635
           +    VPNL T+N L++ + K  +FE+A +++D +   G +PD+ SY   + GL    ++
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRI 655

Query: 636 FDGLEMFDEMFIRGILPDVVCYNILI 713
            D +   ++   RG+LP  + +NIL+
Sbjct: 656 SDAVGFLNDAVDRGVLPTAITWNILV 681



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 37/120 (30%), Positives = 63/120 (52%)
 Frame = +3

Query: 369 PGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKEL 548
           P I SYN ++N   KC ++D++   +   +      +L TY+ L+         + A  +
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRV 312

Query: 549 FDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFK 728
           +  M  NG+ PD+  Y T++NG ++ G++ + LE++  M   G    VV YNILI G F+
Sbjct: 313 YKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFE 371


>ref|XP_002322960.1| predicted protein [Populus trichocarpa] gi|222867590|gb|EEF04721.1|
           predicted protein [Populus trichocarpa]
          Length = 694

 Score =  278 bits (712), Expect = 7e-73
 Identities = 130/218 (59%), Positives = 170/218 (77%)
 Frame = +3

Query: 93  KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTED 272
           K   SAL LFDS + Q P + H+P  F  ILRRL+D KL  H+ RIV+LI+TQ+CKCTED
Sbjct: 21  KSPKSALALFDSASRQ-PGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTED 79

Query: 273 IALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMY 452
           + LTV+K Y+ + M   ALD F+ M ++FGCKPGIRSYN LLN+F++ N  +KAESF  Y
Sbjct: 80  VVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAY 139

Query: 453 FETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGK 632
           FET+G++PNL+TYN+L+KI VKK +F +AK L DWM    ++PD++SYGTVING+VK+G 
Sbjct: 140 FETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGD 199

Query: 633 LFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
           L   LE+FDEMF RG++PDV+CYNI+IDGFFK GD+V+
Sbjct: 200 LVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQ 237



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 46/138 (33%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMV-PNLETYNVL 500
           AL++F  M++  G  P +  YN +++ F K  +Y + +  +        V PN+ TYNV+
Sbjct: 203 ALEVFDEMFER-GLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVM 261

Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
           +    K   F+++ E+++ M+ N  E DLF+Y ++I GL   G +   +E++ EM  R +
Sbjct: 262 INGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSV 321

Query: 681 LPDVVCYNILIDGFFKAG 734
           + DVV YN L++GF +AG
Sbjct: 322 VVDVVTYNALLNGFCRAG 339



 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 43/137 (31%), Positives = 71/137 (51%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
           AL I   M D +GC+      N L+N FV+ ++ ++A  FF   ET G  P + +YN L+
Sbjct: 448 ALGIVHQM-DKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLI 506

Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
               K   F  A      M     +PD+ +Y  +++GL +  K+   L ++ ++ ++G+ 
Sbjct: 507 NGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLE 566

Query: 684 PDVVCYNILIDGFFKAG 734
           PDV  +NIL+ G   AG
Sbjct: 567 PDVTMHNILMHGLCSAG 583



 Score = 76.6 bits (187), Expect = 5e-12
 Identities = 41/137 (29%), Positives = 70/137 (51%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
           AL+++R +  V G +P +  +N L++      + + A   +   +    +PNL T+N L+
Sbjct: 553 ALNLWRQVL-VKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLM 611

Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
               K  E E A  ++  M  NG +PD+ SY   + GL   G++ DG+ +FD+    GIL
Sbjct: 612 DGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGIL 671

Query: 684 PDVVCYNILIDGFFKAG 734
           P  + + IL+    K G
Sbjct: 672 PTSITWYILVRAVLKLG 688



 Score = 75.9 bits (185), Expect = 8e-12
 Identities = 46/168 (27%), Positives = 81/168 (48%)
 Frame = +3

Query: 228 IVKLIQTQECKCTEDIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSF 407
           IV  +    C+ +  +   +I  +        A+  FR M +  GC P + SYN L+N  
Sbjct: 451 IVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM-ETKGCSPTVVSYNTLINGL 509

Query: 408 VKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDL 587
            K   +  A SF          P++ TY++L+    +  + + A  L+  +   G+EPD+
Sbjct: 510 CKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDV 569

Query: 588 FSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKA 731
             +  +++GL   GK+ D L ++  M     LP++V +N L+DG +KA
Sbjct: 570 TMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKA 617



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
 Frame = +3

Query: 381 SYNCLLNSFVKCNEYDKAESFFMYFETMGM--VPNLETYNVLVKIYVKKNEFEKAKELFD 554
           +YN LLN F +     K +  F  +  MG     N+ +YN+ ++   +  + E+A  +++
Sbjct: 327 TYNALLNGFCRAG---KIKESFELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWE 383

Query: 555 WMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAG 734
            +R  G   D  +YG +I+GL KNG L   L++  E    G   D   Y+ ++DG  K G
Sbjct: 384 LLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQG 443



 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
 Frame = +3

Query: 315 SGH---ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLE 485
           +GH   AL I +   D  G K    +Y+ +++   K    D+A       +  G   +  
Sbjct: 407 NGHLNKALKILKEAKDG-GDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPH 465

Query: 486 TYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEM 665
             N L+  +V+ ++ E+A   F  M   G  P + SY T+INGL K  +  D      EM
Sbjct: 466 VCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEM 525

Query: 666 FIRGILPDVVCYNILIDG 719
             +   PD++ Y++L+DG
Sbjct: 526 LEKDWKPDMITYSLLMDG 543


>ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
           gi|449516585|ref|XP_004165327.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  270 bits (691), Expect = 2e-70
 Identities = 123/218 (56%), Positives = 163/218 (74%)
 Frame = +3

Query: 93  KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTED 272
           K+ ++AL +FDS   Q+P + H PF FHHILRRL D KL  H+ RIV L++ Q C C+ED
Sbjct: 21  KNPNAALAIFDSAC-QHPGYAHPPFVFHHILRRLMDPKLVVHVGRIVDLMRAQRCTCSED 79

Query: 273 IALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMY 452
           +AL+ IK Y+   M   AL++F+NM D+FGC PGIRS+N +LN+F++ N++ +AE FF Y
Sbjct: 80  VALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTY 139

Query: 453 FETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGK 632
           F+T GM PNL+TYN+L+KI  KK +FEK K L  WM  NG+ PD+ SYGT+IN L K+G 
Sbjct: 140 FQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGN 199

Query: 633 LFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
           L D +E+FDEM +RG+ PDV+CYNILIDGF + GDFVK
Sbjct: 200 LLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVK 237



 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 45/142 (31%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMV-PNLETYNVL 500
           A+++F  M  V G  P +  YN L++ F++  ++ KA   +    T   V P++ETYN++
Sbjct: 203 AVELFDEM-SVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIM 261

Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
           +    K  + +++ E+++ M+ N   PDLF++ ++I+GL K G      ++F EM   G+
Sbjct: 262 INGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGL 321

Query: 681 LPDVVCYNILIDGFFKAGDFVK 746
            PDV  YN ++ G F+ G   K
Sbjct: 322 SPDVRTYNAMLSGLFRTGKLNK 343



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 44/194 (22%), Positives = 88/194 (45%)
 Frame = +3

Query: 165  FTFHHILRRLTDSKLKTHIPRIVKLIQTQECKCTEDIALTVIKTYSVNYMSGHALDIFRN 344
            F +  ++  L    +      ++  ++    K    +  ++I  Y   +    A+ + R 
Sbjct: 430  FAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLRE 489

Query: 345  MYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKN 524
            M     C P + SYN ++N   K   +  A          G+ P++ TY++L+    +  
Sbjct: 490  MKSK-DCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGE 548

Query: 525  EFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYN 704
            + + A  L+       ++PDL  +  +I+GL    K+   LE+F +M     +PD+V +N
Sbjct: 549  KVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHN 608

Query: 705  ILIDGFFKAGDFVK 746
             +++G +KAGD V+
Sbjct: 609  TIMEGLYKAGDCVE 622



 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 32/120 (26%), Positives = 63/120 (52%)
 Frame = +3

Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
           G KP + +Y+ L++   +  + D A + +       + P+L+ +N+++       + + A
Sbjct: 529 GLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVA 588

Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
            E+F  MR     PDL ++ T++ GL K G   + L+++D +   G+ PD++ YNI   G
Sbjct: 589 LEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 30/116 (25%), Positives = 60/116 (51%)
 Frame = +3

Query: 366 KPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKAKE 545
           KP ++ +N +++      + D A   F     +  VP+L T+N +++   K  +  +A +
Sbjct: 566 KPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALK 625

Query: 546 LFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILI 713
           ++D +   G++PD+ SY     GL    ++ D +E   +   RGILP+   +N+L+
Sbjct: 626 IWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLV 681



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 33/132 (25%), Positives = 69/132 (52%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
           A +I++ +       P + +YN ++N   K  + D++   +   +     P+L T++ ++
Sbjct: 238 ANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMI 297

Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
               K   F  A+++F  M  +G+ PD+ +Y  +++GL + GKL    E+++ M  +   
Sbjct: 298 HGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNC 356

Query: 684 PDVVCYNILIDG 719
            ++V YN+LI G
Sbjct: 357 CNIVSYNMLIQG 368



 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/134 (26%), Positives = 65/134 (48%)
 Frame = +3

Query: 333 IFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIY 512
           +F+ M +  G  P +R+YN +L+   +  + +K    +          N+ +YN+L++  
Sbjct: 312 VFQEMIES-GLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYNMLIQGL 369

Query: 513 VKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDV 692
           +   + E+A   +  +   G++ D  +YG +INGL KNG L   L + +E    G   D 
Sbjct: 370 LDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDT 429

Query: 693 VCYNILIDGFFKAG 734
             Y+ ++ G  K G
Sbjct: 430 FAYSSMVHGLCKKG 443


>ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526155|gb|EEF28491.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 701

 Score =  264 bits (674), Expect = 2e-68
 Identities = 126/219 (57%), Positives = 165/219 (75%), Gaps = 1/219 (0%)
 Frame = +3

Query: 93  KDSHSALTLFDSVTHQNPNFKHTPFTFHHILRRLT-DSKLKTHIPRIVKLIQTQECKCTE 269
           K+  SAL+LF+S +    N  H+   FHHILRRL  DS+L +H+ RIV +++ Q+C C E
Sbjct: 24  KNPLSALSLFESASR---NKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKE 80

Query: 270 DIALTVIKTYSVNYMSGHALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFM 449
           D+ALTVIK Y+ N MS  ALD F+NM D+FGCKPG+RSYN LLN+FV+ NE+D+AESF  
Sbjct: 81  DVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSR 140

Query: 450 YFETMGMVPNLETYNVLVKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNG 629
           YFE+M + PNL+TYN+L+KI  KK + EKA  L DWM    ++PD+FSYGT+ING+VK G
Sbjct: 141 YFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVG 200

Query: 630 KLFDGLEMFDEMFIRGILPDVVCYNILIDGFFKAGDFVK 746
            L   L++FDEM +RG++ DV CYN+LIDGFFK GD+ K
Sbjct: 201 DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDK 239



 Score = 81.6 bits (200), Expect = 2e-13
 Identities = 43/130 (33%), Positives = 71/130 (54%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
           AL++++   D  G KP I  YN L++      + + A   + + +    VPNL T N L+
Sbjct: 555 ALNLWQQALDK-GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLM 613

Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
           +   K  ++EKA E++D +  +G+ PD+ SY   I GL    ++ D +E  ++   RGIL
Sbjct: 614 EGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGIL 673

Query: 684 PDVVCYNILI 713
           P  V +NIL+
Sbjct: 674 PTAVTWNILV 683



 Score = 77.0 bits (188), Expect = 4e-12
 Identities = 40/138 (28%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFF-MYFETMGMVPNLETYNVL 500
           AL +F  M  V G    +  YN L++ F K  +YDK +  +    +   + PN+ TYN++
Sbjct: 205 ALKVFDEM-SVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIM 263

Query: 501 VKIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGI 680
           +    K   F+++ E+++ M  N  E D+F+Y ++I+GL + G +   + ++ E+    +
Sbjct: 264 INGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSL 323

Query: 681 LPDVVCYNILIDGFFKAG 734
           + D V +N +++GF +AG
Sbjct: 324 VVDAVTHNAMLNGFCRAG 341



 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 41/141 (29%), Positives = 71/141 (50%)
 Frame = +3

Query: 324 ALDIFRNMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLV 503
           A++ FR M +  GC P I SYN L+    K   + +A SF          P++ T ++L+
Sbjct: 485 AINFFREM-ECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLM 543

Query: 504 KIYVKKNEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGIL 683
               ++ + E A  L+      G +PD+  Y  +++GL    KL D L+++  M     +
Sbjct: 544 DGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCV 603

Query: 684 PDVVCYNILIDGFFKAGDFVK 746
           P++V  N L++G +K  D+ K
Sbjct: 604 PNLVTRNTLMEGLYKVRDYEK 624



 Score = 66.2 bits (160), Expect = 7e-09
 Identities = 37/126 (29%), Positives = 61/126 (48%)
 Frame = +3

Query: 342 NMYDVFGCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKK 521
           N  D  G K      N L+N FV+ ++ + A +FF   E  G  P + +YN L+K   K 
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKA 514

Query: 522 NEFEKAKELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCY 701
             F +A      M     +PD+ +   +++GL +  K+   L ++ +   +G  PD+  Y
Sbjct: 515 ERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMY 574

Query: 702 NILIDG 719
           NIL+ G
Sbjct: 575 NILMHG 580



 Score = 59.3 bits (142), Expect = 8e-07
 Identities = 38/127 (29%), Positives = 57/127 (44%)
 Frame = +3

Query: 360 GCKPGIRSYNCLLNSFVKCNEYDKAESFFMYFETMGMVPNLETYNVLVKIYVKKNEFEKA 539
           GC+P   +Y  L++   K    +KA   F   E      +   Y+ +V    K+   ++A
Sbjct: 391 GCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450

Query: 540 KELFDWMRGNGIEPDLFSYGTVINGLVKNGKLFDGLEMFDEMFIRGILPDVVCYNILIDG 719
             + + M   G + D      +ING V+  KL D +  F EM  +G  P +V YN LI G
Sbjct: 451 ISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKG 510

Query: 720 FFKAGDF 740
             KA  F
Sbjct: 511 LCKAERF 517


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