BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021739
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [...   188   7e-46
ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 ...   188   9e-46
ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|2...   185   8e-45
ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana] ...   184   1e-44
ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arab...   184   1e-44

>ref|XP_002510662.1| ribosome biogenesis protein tsr1, putative [Ricinus communis]
           gi|223551363|gb|EEF52849.1| ribosome biogenesis protein
           tsr1, putative [Ricinus communis]
          Length = 792

 Score =  188 bits (478), Expect = 7e-46
 Identities = 81/97 (83%), Positives = 92/97 (94%)
 Frame = +3

Query: 3   RIILKKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGA 182
           R ILK+IILTGYPQRVSKLKA+VRYMFH PEDVRWFKP+EVWTKCGRRGR+KEPVGTHGA
Sbjct: 696 RTILKRIILTGYPQRVSKLKASVRYMFHNPEDVRWFKPVEVWTKCGRRGRIKEPVGTHGA 755

Query: 183 MKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRYPMINA 293
           MKCI NG++QQHDTVCMSL+KR YPKWPE R+P+++A
Sbjct: 756 MKCILNGVLQQHDTVCMSLYKRAYPKWPEHRFPILDA 792


>ref|XP_002270499.1| PREDICTED: pre-rRNA-processing protein TSR1 homolog [Vitis
           vinifera] gi|297745545|emb|CBI40710.3| unnamed protein
           product [Vitis vinifera]
          Length = 801

 Score =  188 bits (477), Expect = 9e-46
 Identities = 82/97 (84%), Positives = 91/97 (93%)
 Frame = +3

Query: 3   RIILKKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGA 182
           RIILKKIILTGYPQRVSKLKA VRYMFH+P+DVRWFKP+EVWTKCGRRGRVKEPVGTHG 
Sbjct: 705 RIILKKIILTGYPQRVSKLKAAVRYMFHSPDDVRWFKPVEVWTKCGRRGRVKEPVGTHGT 764

Query: 183 MKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRYPMINA 293
           MKCIFNG++QQHDTVCMSL+KR YPKWPE  +P++ A
Sbjct: 765 MKCIFNGVLQQHDTVCMSLYKRTYPKWPEHGFPLLYA 801


>ref|XP_002307783.1| predicted protein [Populus trichocarpa] gi|222857232|gb|EEE94779.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score =  185 bits (469), Expect = 8e-45
 Identities = 79/96 (82%), Positives = 92/96 (95%)
 Frame = +3

Query: 3   RIILKKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGA 182
           RIILKKI+LTGYPQRVSKLKA+VRYMFH+PEDVRWFKP+EV+TKCGR GR+KEPVGTHGA
Sbjct: 702 RIILKKIVLTGYPQRVSKLKASVRYMFHSPEDVRWFKPVEVYTKCGRHGRIKEPVGTHGA 761

Query: 183 MKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRYPMIN 290
           MKC FNG++QQHDTVCMSL+KR YPKWPE R+P+++
Sbjct: 762 MKCTFNGVLQQHDTVCMSLYKRAYPKWPEHRFPILD 797


>ref|NP_564480.1| uncharacterized protein [Arabidopsis thaliana]
           gi|13605690|gb|AAK32838.1|AF361826_1 At1g42440/F7F22_7
           [Arabidopsis thaliana] gi|22137072|gb|AAM91381.1|
           At1g42440/F7F22_7 [Arabidopsis thaliana]
           gi|23397226|gb|AAN31895.1| unknown protein [Arabidopsis
           thaliana] gi|332193797|gb|AEE31918.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 793

 Score =  184 bits (468), Expect = 1e-44
 Identities = 79/95 (83%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   RIILKKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGA 182
           +IILKKIILTGYPQRVSK+KA+VRYMFH PEDV+WFKP+EVW+KCGRRGRVKEPVGTHGA
Sbjct: 698 KIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGA 757

Query: 183 MKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRYPMI 287
           MKCIFNG+VQQHD VCM+L+KR YPKWPE+ YP +
Sbjct: 758 MKCIFNGVVQQHDVVCMNLYKRAYPKWPERLYPQL 792


>ref|XP_002893932.1| hypothetical protein ARALYDRAFT_473739 [Arabidopsis lyrata subsp.
           lyrata] gi|297339774|gb|EFH70191.1| hypothetical protein
           ARALYDRAFT_473739 [Arabidopsis lyrata subsp. lyrata]
          Length = 799

 Score =  184 bits (467), Expect = 1e-44
 Identities = 79/95 (83%), Positives = 90/95 (94%)
 Frame = +3

Query: 3   RIILKKIILTGYPQRVSKLKATVRYMFHTPEDVRWFKPIEVWTKCGRRGRVKEPVGTHGA 182
           +IILKKIILTGYPQRVSK+KA+VRYMFH PEDV+WFKP+EVW+KCGRRGRVKEPVGTHGA
Sbjct: 704 KIILKKIILTGYPQRVSKMKASVRYMFHNPEDVKWFKPVEVWSKCGRRGRVKEPVGTHGA 763

Query: 183 MKCIFNGIVQQHDTVCMSLFKRVYPKWPEQRYPMI 287
           MKCIFNG+VQQHD VCM+L+KR YPKWPE+ YP +
Sbjct: 764 MKCIFNGVVQQHDIVCMNLYKRAYPKWPERLYPQL 798