BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021737
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2...   201   2e-49
ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus c...   192   9e-47
ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis tha...   186   5e-45
gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thal...   185   1e-44
ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|2...   183   4e-44

>ref|XP_002278976.2| PREDICTED: DNA repair protein recA homolog 2, mitochondrial-like
           [Vitis vinifera] gi|296087050|emb|CBI33377.3| unnamed
           protein product [Vitis vinifera]
          Length = 398

 Score =  201 bits (511), Expect = 2e-49
 Identities = 100/187 (53%), Positives = 138/187 (73%), Gaps = 3/187 (1%)
 Frame = +1

Query: 1   VAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPREGLGY 180
           VAAL  Q+ELDV I G  + +QS++M QA+RKI  SLC S TL++F+NQVRS  +   G+
Sbjct: 210 VAALVPQHELDVVIGGTYQDVQSQIMAQALRKIHYSLCRSETLIIFVNQVRSSLKSSHGF 269

Query: 181 AT---VTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCIEVVKNKLAPAMKMADLDI 351
                VTCGGNAL FY+AVR+++ R GL+R ED++ GL VC++VVKNKLA A K ADL I
Sbjct: 270 GRLDEVTCGGNALRFYAAVRLRVMRTGLLRTEDKVTGLGVCVQVVKNKLAHATKKADLGI 329

Query: 352 IYGKGIPYEAEVLEMACKQGVIMKRDSGYCIEGQILENKNKAEKYLAENCEIRDKVVTVL 531
            +G+GI +E+EVLE+AC+ GVI K  S Y IEG+   NK +AE+Y+A+N  + +++V+ L
Sbjct: 330 QFGRGICFESEVLELACEHGVIWKEGSKYIIEGEAFNNKQEAEQYMAQNSGVLERIVSFL 389

Query: 532 RSQLFDK 552
           RS LF++
Sbjct: 390 RSHLFER 396


>ref|XP_002533897.1| DNA repair protein reca, putative [Ricinus communis]
           gi|223526148|gb|EEF28487.1| DNA repair protein reca,
           putative [Ricinus communis]
          Length = 388

 Score =  192 bits (488), Expect = 9e-47
 Identities = 102/185 (55%), Positives = 134/185 (72%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1   VAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPREGLGY 180
           VAAL  Q ELD  + G     QSR+M+QAVRKI+ SL  S TL++FLNQVR+  + G G 
Sbjct: 205 VAALVPQLELDTML-GSTEDRQSRIMSQAVRKINYSLSQSKTLIIFLNQVRANVKSGQGL 263

Query: 181 ATV---TCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCIEVVKNKLAPAMKMADLDI 351
             V   TCGGNAL+FYSAVR+++ RK L++ EDEI GL V ++VVKNKLAPAMK A+L I
Sbjct: 264 GQVDEATCGGNALKFYSAVRLRMARKALLKTEDEITGLRVSVQVVKNKLAPAMKKAELGI 323

Query: 352 IYGKGIPYEAEVLEMACKQGVIMKRDSGYCIEGQILENKNKAEKYLAENCEIRDKVVTVL 531
            +G+G   E+EVLE+AC+ GVI +  S YCIE ++  NK+ AE+YLAEN ++ D++V  L
Sbjct: 324 QFGRGFCSESEVLELACEYGVIRQEGSTYCIEEEVFSNKHAAEEYLAENYKVHDRIVRTL 383

Query: 532 RSQLF 546
           R+ LF
Sbjct: 384 RTHLF 388


>ref|NP_187625.2| DNA repair protein recA-like 2 [Arabidopsis thaliana]
           gi|75158993|sp|Q8RY99.1|RECAM_ARATH RecName: Full=DNA
           repair protein recA homolog 2, mitochondrial; AltName:
           Full=Recombinase A homolog 2; Flags: Precursor
           gi|18996122|gb|AAL79768.1| RecA protein [Arabidopsis
           thaliana] gi|22531124|gb|AAM97066.1| putative RecA
           protein [Arabidopsis thaliana]
           gi|23198012|gb|AAN15533.1| putative RecA protein
           [Arabidopsis thaliana] gi|332641343|gb|AEE74864.1| DNA
           repair protein recA-like 2 [Arabidopsis thaliana]
          Length = 389

 Score =  186 bits (473), Expect = 5e-45
 Identities = 97/185 (52%), Positives = 132/185 (71%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1   VAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPREGLGY 180
           VAAL  Q ELD  +    R  QSR+MTQA+RKI  S+ +S TL+VFLNQVRS  +  + +
Sbjct: 203 VAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHF 262

Query: 181 A---TVTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCIEVVKNKLAPAMKMADLDI 351
                VTCGGNAL F++A+R+K+ R GLI+  ++I+GL+VC++VVKNKLAP  K ++L I
Sbjct: 263 PHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKISGLNVCVQVVKNKLAPGKKKSELGI 322

Query: 352 IYGKGIPYEAEVLEMACKQGVIMKRDSGYCIEGQILENKNKAEKYLAENCEIRDKVVTVL 531
            +G G   E EVLE+AC+ GVI++  + Y IEG+++E K+ AEKYL EN E  D VV +L
Sbjct: 323 HFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAIL 382

Query: 532 RSQLF 546
           R+QLF
Sbjct: 383 RNQLF 387


>gb|AAF04410.1|AC010927_3 putative RecA protein [Arabidopsis thaliana]
          Length = 389

 Score =  185 bits (469), Expect = 1e-44
 Identities = 96/185 (51%), Positives = 131/185 (70%), Gaps = 3/185 (1%)
 Frame = +1

Query: 1   VAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPREGLGY 180
           VAAL  Q ELD  +    R  QSR+MTQA+RKI  S+ +S TL+VFLNQVRS  +  + +
Sbjct: 203 VAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHF 262

Query: 181 A---TVTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCIEVVKNKLAPAMKMADLDI 351
                VTCGGNAL F++A+R+K+ R GLI+  +++ GL+VC++VVKNKLAP  K ++L I
Sbjct: 263 PHAEEVTCGGNALPFHAAIRLKMIRTGLIKTANKVYGLNVCVQVVKNKLAPGKKKSELGI 322

Query: 352 IYGKGIPYEAEVLEMACKQGVIMKRDSGYCIEGQILENKNKAEKYLAENCEIRDKVVTVL 531
            +G G   E EVLE+AC+ GVI++  + Y IEG+++E K+ AEKYL EN E  D VV +L
Sbjct: 323 HFGHGFYVEREVLELACEHGVILREGTSYFIEGEVIEGKDAAEKYLVENKEALDTVVAIL 382

Query: 532 RSQLF 546
           R+QLF
Sbjct: 383 RNQLF 387


>ref|XP_002323326.1| predicted protein [Populus trichocarpa] gi|222867956|gb|EEF05087.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  183 bits (465), Expect = 4e-44
 Identities = 96/182 (52%), Positives = 126/182 (69%)
 Frame = +1

Query: 1   VAALTSQYELDVGIDGPCRGIQSRLMTQAVRKISSSLCHSGTLLVFLNQVRSRPREGLGY 180
           VAAL  Q E+D  + G    IQSRLMTQA+RKI+ SLC S TL++FLNQVR   + G   
Sbjct: 143 VAALVPQREIDTAVGGTFEDIQSRLMTQALRKINYSLCQSQTLIIFLNQVRKSLKSGRA- 201

Query: 181 ATVTCGGNALEFYSAVRMKIFRKGLIREEDEIAGLSVCIEVVKNKLAPAMKMADLDIIYG 360
             VTCGGNAL+FYSAVR+++ R  L++ ED I GL VC +VVKNKLAPAM  A+L+I +G
Sbjct: 202 EEVTCGGNALKFYSAVRLRMIRTRLLKTEDRITGLGVCAQVVKNKLAPAMTKAELEIQFG 261

Query: 361 KGIPYEAEVLEMACKQGVIMKRDSGYCIEGQILENKNKAEKYLAENCEIRDKVVTVLRSQ 540
           +G   E+EVLE+AC+  +I K  S Y I  ++  N+  AE+YL EN  + D++V  LR +
Sbjct: 262 RGFCSESEVLELACEHSLIKKEGSSYVIGRKVFGNERVAEQYLMENEGVHDQIVAKLREK 321

Query: 541 LF 546
           LF
Sbjct: 322 LF 323