BLASTX nr result

ID: Coptis25_contig00021726 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021726
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284035.1| PREDICTED: uncharacterized protein LOC100266...   137   9e-31
ref|XP_002513982.1| conserved hypothetical protein [Ricinus comm...   137   1e-30
emb|CAN61579.1| hypothetical protein VITISV_008032 [Vitis vinifera]   135   5e-30
ref|XP_002890069.1| hypothetical protein ARALYDRAFT_888850 [Arab...   122   4e-26
ref|NP_001190692.1| uncharacterized protein [Arabidopsis thalian...   117   8e-25

>ref|XP_002284035.1| PREDICTED: uncharacterized protein LOC100266077 [Vitis vinifera]
           gi|302142005|emb|CBI19208.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/98 (67%), Positives = 84/98 (85%)
 Frame = +2

Query: 23  DLPQEIDEFIKESIDFSLGLPISTNTLELKLRASEQARKCLQDQYFLLHSRLKDKDQRID 202
           D+PQEID++IKESI +SLGLP+S  TLELKL+AS +A+  L+D+   LHS+LK+KD+ I+
Sbjct: 2   DIPQEIDDYIKESIQYSLGLPVSAQTLELKLQASLEAQNQLRDRCLHLHSKLKEKDEIIE 61

Query: 203 RARSEASQSALALKKFVEENQKLATECTNLLNQCSRWE 316
           R R+EAS +ALALKKFVEENQKLA EC NLL+QCS+WE
Sbjct: 62  RTRAEASMNALALKKFVEENQKLALECANLLSQCSKWE 99


>ref|XP_002513982.1| conserved hypothetical protein [Ricinus communis]
           gi|223547068|gb|EEF48565.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 330

 Score =  137 bits (344), Expect = 1e-30
 Identities = 65/98 (66%), Positives = 83/98 (84%)
 Frame = +2

Query: 23  DLPQEIDEFIKESIDFSLGLPISTNTLELKLRASEQARKCLQDQYFLLHSRLKDKDQRID 202
           DLPQEI+++IKE+I  SLGLPIST  L+LKLRASE A + L+DQY LL  +L+ KDQ ID
Sbjct: 2   DLPQEIEDYIKETISDSLGLPISTQNLQLKLRASEDAHRRLRDQYLLLLEKLRQKDQLID 61

Query: 203 RARSEASQSALALKKFVEENQKLATECTNLLNQCSRWE 316
           RA++EAS +A+A+KKFVEENQ+LA EC NL+NQC++WE
Sbjct: 62  RAKAEASMNAMAVKKFVEENQRLAAECANLVNQCNKWE 99


>emb|CAN61579.1| hypothetical protein VITISV_008032 [Vitis vinifera]
          Length = 331

 Score =  135 bits (339), Expect = 5e-30
 Identities = 65/98 (66%), Positives = 83/98 (84%)
 Frame = +2

Query: 23  DLPQEIDEFIKESIDFSLGLPISTNTLELKLRASEQARKCLQDQYFLLHSRLKDKDQRID 202
           D+PQEID++IKESI +SLGLP+S  TLE KL+AS +A+  L+D+   LHS+LK+KD+ I+
Sbjct: 2   DIPQEIDDYIKESIQYSLGLPVSAQTLEXKLQASLEAQNQLRDRCLHLHSKLKZKDEIIE 61

Query: 203 RARSEASQSALALKKFVEENQKLATECTNLLNQCSRWE 316
           R R+EAS +ALALKKFVEENQKLA EC NLL+QCS+WE
Sbjct: 62  RTRAEASMNALALKKFVEENQKLALECANLLSQCSKWE 99


>ref|XP_002890069.1| hypothetical protein ARALYDRAFT_888850 [Arabidopsis lyrata subsp.
           lyrata] gi|297335911|gb|EFH66328.1| hypothetical protein
           ARALYDRAFT_888850 [Arabidopsis lyrata subsp. lyrata]
          Length = 289

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/98 (60%), Positives = 80/98 (81%)
 Frame = +2

Query: 23  DLPQEIDEFIKESIDFSLGLPISTNTLELKLRASEQARKCLQDQYFLLHSRLKDKDQRID 202
           DL +E+D+FIKE+ID SLGLPIS + L+ KL  +E++++ L++QY  L SRLK+KD+ ID
Sbjct: 2   DLSREVDDFIKETIDHSLGLPISMDALKKKLYTAEESQRRLREQYLSLVSRLKEKDKVID 61

Query: 203 RARSEASQSALALKKFVEENQKLATECTNLLNQCSRWE 316
             RSEAS +A +LKKFVEENQKLA+EC +L+NQC +WE
Sbjct: 62  LVRSEASMNAQSLKKFVEENQKLASECEDLVNQCKKWE 99


>ref|NP_001190692.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332657318|gb|AEE82718.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 367

 Score =  117 bits (294), Expect = 8e-25
 Identities = 60/103 (58%), Positives = 81/103 (78%)
 Frame = +2

Query: 8   TTTSRDLPQEIDEFIKESIDFSLGLPISTNTLELKLRASEQARKCLQDQYFLLHSRLKDK 187
           T +  +L QE++E+IK++ID SLGLPIS  +L+ KL  +E++++ L++QY  L SRLK+K
Sbjct: 13  TKSRTNLSQEVEEYIKDTIDHSLGLPISMESLQKKLYTAEESQRRLREQYQGLISRLKEK 72

Query: 188 DQRIDRARSEASQSALALKKFVEENQKLATECTNLLNQCSRWE 316
           D  IDR RSEAS +A ALKKFVEENQKLA+EC NLL+QC + E
Sbjct: 73  DHVIDRVRSEASMNAQALKKFVEENQKLASECGNLLSQCKKLE 115


Top