BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021720
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-li...    72   2e-25
emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]    72   4e-25
gb|ADL36680.1| DOF domain class transcription factor [Malus x do...    55   8e-13
ref|XP_002514602.1| conserved hypothetical protein [Ricinus comm...    53   1e-07
ref|XP_002322044.1| f-box family protein [Populus trichocarpa] g...    46   4e-06

>ref|XP_002267092.1| PREDICTED: dof zinc finger protein DOF5.4-like [Vitis vinifera]
          Length = 291

 Score = 72.0 bits (175), Expect(2) = 2e-25
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = +1

Query: 409 QSRTSNGELTALDWQSNGDQGLFDLANTVDQGGYWTQNQWNENDQHLYLP 558
           Q+R+++G   +LDWQ++GDQG+FDL   VDQ GYWTQ+QW++ND  LYLP
Sbjct: 243 QNRSNHGGFPSLDWQTSGDQGIFDLPGNVDQ-GYWTQSQWSDNDHPLYLP 291



 Score = 69.7 bits (169), Expect(2) = 2e-25
 Identities = 44/111 (39%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
 Frame = +2

Query: 8   AATITSSSDVPSLINFSDSRLFMNQQPTATPAAANFEMLENLENQSSGIFAAENGSFTSL 187
           A +  SS+   +L+ F +SR F  Q P       NFEM   L++ S G    E GSFTSL
Sbjct: 124 AVSAPSSNAASTLVGFRESRFFAPQSPNP-----NFEMPTLLDHSSDGNIFPEIGSFTSL 178

Query: 188 MNVGNP-----YNFSDISTYRYNGN-HQQQEMEQKMASMVEEMKMQELTAG 322
           M   N      +N SDIS ++Y     Q Q+ +Q+   M +E+KMQE+TAG
Sbjct: 179 MTGSNDPAALGFNISDISPFKYQEQVDQNQQWQQQQQKMSDELKMQEITAG 229


>emb|CAN64066.1| hypothetical protein VITISV_041736 [Vitis vinifera]
          Length = 286

 Score = 72.0 bits (175), Expect(2) = 4e-25
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = +1

Query: 409 QSRTSNGELTALDWQSNGDQGLFDLANTVDQGGYWTQNQWNENDQHLYLP 558
           Q+R+++G   +LDWQ++GDQG+FDL   VDQ GYWTQ+QW++ND  LYLP
Sbjct: 238 QNRSNHGGFPSLDWQTSGDQGIFDLPGNVDQ-GYWTQSQWSDNDHPLYLP 286



 Score = 68.6 bits (166), Expect(2) = 4e-25
 Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
 Frame = +2

Query: 5   AAATITSSSDVPSLINFSDSRLFMNQQPTATPAAANFEMLENLENQSSGIFAAENGSFTS 184
           AAAT  ++  V +L+ F +SR F  Q P       NFEM   L++ S      E GSFTS
Sbjct: 118 AAATTATTEAVSALVGFRESRFFPPQSPNP-----NFEMPTLLDHSSDSNIFPEIGSFTS 172

Query: 185 LMNVGNP-----YNFSDISTYRYNGN-HQQQEMEQKMASMVEEMKMQELTAG 322
           LM   N      +N SDIS ++Y     Q Q+  Q+   M +E+KMQE++AG
Sbjct: 173 LMTGSNDPAALGFNISDISPFKYQEQVDQNQQWRQQQQKMSDELKMQEISAG 224


>gb|ADL36680.1| DOF domain class transcription factor [Malus x domestica]
          Length = 520

 Score = 55.5 bits (132), Expect(2) = 8e-13
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +1

Query: 406 DQSRTSNGELTALDWQ-SNGDQGLFDLANTVDQGGYWTQNQWNENDQ-HLYLP 558
           ++S    G   +LDWQ  +GDQGLFDL NTVDQ  YW+ +QW + D   LYLP
Sbjct: 469 NRSHVGGGGFGSLDWQPGSGDQGLFDLPNTVDQ-AYWSHSQWTDQDHPTLYLP 520



 Score = 43.5 bits (101), Expect(2) = 8e-13
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = +2

Query: 23  SSSDVPSLINFSDSRLFMNQQPTA---TPAAANFEMLENLENQSSGIFAAENGSFTSLMN 193
           S+S++ S I+  +S  F++Q        P A+   +LE+   + +GIF+ E GSFTSL+ 
Sbjct: 349 SASNLLSNIHNPESNFFISQGGANGGFEPGASAAALLEH-STEINGIFS-EIGSFTSLIT 406

Query: 194 VGN--PYNFSDI--STYRYNGNHQQQEMEQ-KMASMVEEMKMQELTAG 322
             N  P++F +I  S +   GNH   ++ Q +     + +KMQE++ G
Sbjct: 407 SSNDMPFSFGNINGSPFNQQGNHDHNQVHQTQWGQQNQGVKMQEISGG 454


>ref|XP_002514602.1| conserved hypothetical protein [Ricinus communis]
           gi|223546206|gb|EEF47708.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score = 52.8 bits (125), Expect(2) = 1e-07
 Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
 Frame = +1

Query: 409 QSRTSNGELTALDWQ-SNGDQGLFDLANTVDQGGYWTQNQWNENDQ-HLYLP 558
           Q    +G+   LDWQ S GDQ LFDL N VDQ  YW+Q+QW + DQ  LYLP
Sbjct: 263 QINDRSGKGGPLDWQASGGDQSLFDLPNAVDQ-TYWSQSQWTDQDQPTLYLP 313



 Score = 28.5 bits (62), Expect(2) = 1e-07
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
 Frame = +2

Query: 11  ATITSSSDVPSLIN--FSDSRLFMNQQPTATPAAANFEMLENLENQSSGIFAAENGSFTS 184
           A  +S+S   +++N    +S+L+++  P     +    +LE  +    GIF+ E  S TS
Sbjct: 148 AASSSASATTNILNNGIGESKLYVH--PNTNTTSFEHGLLE--QESDCGIFS-EIASLTS 202

Query: 185 LMNVGN----PYNFSDISTYRYNGNHQQQEMEQKMASMVEEMKM 304
           L+   +     + F ++ T     N+QQ   +QKM  +  +  M
Sbjct: 203 LITSSSNDHLQFGFGNLMTQHSLENNQQWHQQQKMVGICGQNDM 246


>ref|XP_002322044.1| f-box family protein [Populus trichocarpa]
           gi|118488417|gb|ABK96024.1| unknown [Populus
           trichocarpa] gi|222869040|gb|EEF06171.1| f-box family
           protein [Populus trichocarpa]
          Length = 321

 Score = 46.2 bits (108), Expect(2) = 4e-06
 Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +1

Query: 412 SRTSNGELTALDWQ-SNGDQ--GLFDLANTVDQGGYWTQNQWNENDQHLYLP 558
           +  + G   ALDWQ  +GDQ  G F L NTVDQ  YW+Q+QW  ND   YLP
Sbjct: 273 TENTGGGFGALDWQLGSGDQAGGFFYLPNTVDQA-YWSQSQW--NDMTAYLP 321



 Score = 30.0 bits (66), Expect(2) = 4e-06
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
 Frame = +2

Query: 2   EAAATITSSSDVPSLIN-FSDSRLFM--NQQPTATPAAANFEMLENLENQSSGIFAAENG 172
           EA + ++ +S   +L+N   +S++F   +  P+  PA     +LE  +    GIF+ E G
Sbjct: 150 EAVSALSVNSVSNNLLNGIVESKIFPRGDMNPSFEPA-----LLE--QGSDCGIFS-EIG 201

Query: 173 SFTSLMNVGNPYNFSDISTYRYNGNHQQQEMEQKMASMVEEMKM----QELTAG 322
           SFTSL+   N  +F   +T       QQQ +E  + +   + +     QE+T G
Sbjct: 202 SFTSLITSTNDLSFGFSNT---TNQQQQQGLEHHVQNNQNQQQWQNQHQEMTGG 252