BLASTX nr result

ID: Coptis25_contig00021711 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021711
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24120.3| unnamed protein product [Vitis vinifera]              158   1e-36
ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2...   158   1e-36
emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]   158   1e-36
ref|XP_002315097.1| peroxisomal membrane ABC transporter family,...   147   2e-33
gb|AFW80408.1| hypothetical protein ZEAMMB73_360015 [Zea mays]        145   6e-33

>emb|CBI24120.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/115 (69%), Positives = 90/115 (78%)
 Frame = +2

Query: 2   VLVDVRLDYILYRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDET 181
           VL DVRL YIL RFN LDST EWSSVLSLGEQQRLAFAR           DESTSALDE 
Sbjct: 575 VLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLLDESTSALDEA 634

Query: 182 NEAHLYKQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 346
           NEAHLY+QIEAAGITYVS+GHRRTL  YH ++LHIS  D +S+Q+NW ++ INQ+
Sbjct: 635 NEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIEPINQD 689


>ref|XP_002265884.1| PREDICTED: ABC transporter D family member 2, chloroplastic-like
           [Vitis vinifera]
          Length = 722

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/115 (69%), Positives = 90/115 (78%)
 Frame = +2

Query: 2   VLVDVRLDYILYRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDET 181
           VL DVRL YIL RFN LDST EWSSVLSLGEQQRLAFAR           DESTSALDE 
Sbjct: 600 VLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLLDESTSALDEA 659

Query: 182 NEAHLYKQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 346
           NEAHLY+QIEAAGITYVS+GHRRTL  YH ++LHIS  D +S+Q+NW ++ INQ+
Sbjct: 660 NEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIEPINQD 714


>emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
          Length = 1504

 Score =  158 bits (399), Expect = 1e-36
 Identities = 80/115 (69%), Positives = 90/115 (78%)
 Frame = +2

Query: 2    VLVDVRLDYILYRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDET 181
            VL DVRL YIL RFN LDST EWSSVLSLGEQQRLAFAR           DESTSALDE 
Sbjct: 1382 VLEDVRLGYILSRFNSLDSTYEWSSVLSLGEQQRLAFARLLLSKPNLVLLDESTSALDEA 1441

Query: 182  NEAHLYKQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 346
            NEAHLY+QIEAAGITYVS+GHRRTL  YH ++LHIS  D +S+Q+NW ++ INQ+
Sbjct: 1442 NEAHLYQQIEAAGITYVSIGHRRTLYGYHNRRLHISAADPNSTQRNWYIEPINQD 1496


>ref|XP_002315097.1| peroxisomal membrane ABC transporter family, PMP family [Populus
           trichocarpa] gi|222864137|gb|EEF01268.1| peroxisomal
           membrane ABC transporter family, PMP family [Populus
           trichocarpa]
          Length = 651

 Score =  147 bits (371), Expect = 2e-33
 Identities = 73/115 (63%), Positives = 88/115 (76%)
 Frame = +2

Query: 2   VLVDVRLDYILYRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDET 181
           VL DVRL YIL RF  LDST+EWSSVLSLGEQQRLAFAR           DESTSALDE 
Sbjct: 529 VLEDVRLGYILSRFGSLDSTHEWSSVLSLGEQQRLAFARLLLSKPKVVLLDESTSALDEA 588

Query: 182 NEAHLYKQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDDDSSQQNWLLKDINQN 346
           NE HLY+QIEAAG+TY+SVGHRRTL  +H + LHI+ +D  S+++NW ++ IN++
Sbjct: 589 NEEHLYRQIEAAGMTYISVGHRRTLYDHHNRNLHITTVDPSSNERNWHVEPINRD 643


>gb|AFW80408.1| hypothetical protein ZEAMMB73_360015 [Zea mays]
          Length = 762

 Score =  145 bits (367), Expect = 6e-33
 Identities = 75/111 (67%), Positives = 86/111 (77%), Gaps = 1/111 (0%)
 Frame = +2

Query: 2   VLVDVRLDYILYRFNGLDSTNEWSSVLSLGEQQRLAFARXXXXXXXXXXXDESTSALDET 181
           VL DV+L YIL RFNGLDST++W+SVLSLGEQQRLAFAR           DESTSALDE 
Sbjct: 637 VLEDVKLGYILPRFNGLDSTHDWASVLSLGEQQRLAFARLLLATPTLVLLDESTSALDEA 696

Query: 182 NEAHLYKQIEAAGITYVSVGHRRTLEKYHRKKLHISKMDD-DSSQQNWLLK 331
           NEAHLY QIEAAGITYVS+GHR+TL K+H K L+IS  D  D++ +NW LK
Sbjct: 697 NEAHLYSQIEAAGITYVSIGHRKTLHKFHNKALYISMSDSTDTNPRNWELK 747


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