BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021700
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   148   4e-34
ref|XP_002523999.1| Protein AFR, putative [Ricinus communis] gi|...   146   2e-33
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...   138   4e-31
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...   136   2e-30

>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score =  148 bits (374), Expect = 4e-34
 Identities = 74/120 (61%), Positives = 93/120 (77%), Gaps = 2/120 (1%)
 Frame = +3

Query: 27  SVQSISIADRLVLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSV 206
           SVQS+S A+RLVLLAATTH+  PAL  PLIF+P TKTW  GP+ STPRRWCA GS+G +V
Sbjct: 128 SVQSVSAANRLVLLAATTHNLSPALPRPLIFHPLTKTWSFGPTLSTPRRWCALGSLGPTV 187

Query: 207 YLASGVGSSGYTQDLAQSAEKWNVL--NGTWEKVASLKHGGRFSREAVEAVGWRGKLCVV 380
           Y+ASG+GS  ++  +A+S +KWN+   N  WEK   LK  GRFSREA++AVGW+ KLC+V
Sbjct: 188 YVASGIGSH-FSIHVARSLQKWNLQNPNAVWEKKTELK-DGRFSREAIDAVGWKQKLCMV 245


>ref|XP_002523999.1| Protein AFR, putative [Ricinus communis]
           gi|223536726|gb|EEF38367.1| Protein AFR, putative
           [Ricinus communis]
          Length = 378

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/121 (59%), Positives = 90/121 (74%), Gaps = 4/121 (3%)
 Frame = +3

Query: 30  VQSISIADRLVLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVY 209
           +QS+++++ LVL+A  TH  +PALS PL+F+P +  W  GP F+TPRRWCATGSV N+VY
Sbjct: 128 IQSLTVSNHLVLIAGATHRLVPALSRPLLFHPQSNRWFFGPPFTTPRRWCATGSVNNTVY 187

Query: 210 LASGVGSSGYTQDLAQSAEKW----NVLNGTWEKVASLKHGGRFSREAVEAVGWRGKLCV 377
           LASGVG   Y  D+A+S EKW    N     WEK+ SLK  GRFSREAVEAVGW+GKLC+
Sbjct: 188 LASGVGLQ-YNGDVARSMEKWDMKDNKTKWKWEKLGSLK-DGRFSREAVEAVGWKGKLCM 245

Query: 378 V 380
           V
Sbjct: 246 V 246


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  139 bits (350), Expect = 2e-31
 Identities = 72/131 (54%), Positives = 91/131 (69%), Gaps = 14/131 (10%)
 Frame = +3

Query: 30  VQSISIADRLVLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSVY 209
           +QSIS + RL+LLAAT+H F PALS PL+FNP + +W  GP  +TPRRWCA GS   +VY
Sbjct: 137 IQSISASYRLILLAATSHSFSPALSRPLVFNPLSGSWAFGPPLATPRRWCAAGSAHGTVY 196

Query: 210 LASGVGSSGYTQDLAQSAEKW----------NVLNGT----WEKVASLKHGGRFSREAVE 347
           +ASG+GS  Y  D+A+S EKW          N+ N T    W KV  LK+ GRFSR+A++
Sbjct: 197 VASGIGSQ-YNTDVAKSLEKWDLQNQKAMISNIRNKTTTWKWVKVKELKN-GRFSRDAID 254

Query: 348 AVGWRGKLCVV 380
           AVGWRGKLC+V
Sbjct: 255 AVGWRGKLCMV 265


>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score =  138 bits (348), Expect = 4e-31
 Identities = 71/119 (59%), Positives = 91/119 (76%), Gaps = 1/119 (0%)
 Frame = +3

Query: 27  SVQSISIADRLVLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNSV 206
           SVQSIS++D L+LLAATTH+  PALSHPLIFNP ++ W  GP+ + PRRWCA G+    V
Sbjct: 136 SVQSISVSDNLILLAATTHNLTPALSHPLIFNP-SQGWSVGPALTNPRRWCALGTSEGMV 194

Query: 207 YLASGVGSSGYTQDLAQSAEKWNVLNG-TWEKVASLKHGGRFSREAVEAVGWRGKLCVV 380
           Y+ASG+GS  ++ D+A+S EKW+ +N   WEK   +K  GRFSREAV+AVGWRGKL +V
Sbjct: 195 YVASGIGSH-FSVDVAKSIEKWDPINDPIWEKKTDMK-DGRFSREAVDAVGWRGKLYMV 251


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  136 bits (343), Expect = 2e-30
 Identities = 67/131 (51%), Positives = 90/131 (68%), Gaps = 14/131 (10%)
 Frame = +3

Query: 30  VQSISIADRLVLLAATTHHFLPALSHPLIFNPFTKTWHHGPSFSTPRRWCATGSVGNS-V 206
           +QS++++  L+LLAATT +F PALS P IFNP ++ W  GP  +TPRRWCA G++ NS V
Sbjct: 132 IQSVTVSGHLILLAATTDNFYPALSRPFIFNPVSRRWSFGPPLTTPRRWCAAGAINNSTV 191

Query: 207 YLASGVGSSGYTQDLAQSAEKWNVLNG-------------TWEKVASLKHGGRFSREAVE 347
           Y+ASG+GS  ++ D+A+S EKW  L                WEKV  LK  GRFSR+A++
Sbjct: 192 YVASGIGSQ-FSADIAKSVEKWEFLRDEKRTRSSNQSCLWKWEKVKGLK-DGRFSRDAID 249

Query: 348 AVGWRGKLCVV 380
           A+GWRGKLC+V
Sbjct: 250 AIGWRGKLCMV 260