BLASTX nr result
ID: Coptis25_contig00021694
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00021694
(1230 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002510449.1| uroporphyrin-III methyltransferase, putative... 306 4e-91
emb|CBI19761.3| unnamed protein product [Vitis vinifera] 320 6e-85
ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methy... 320 6e-85
ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methy... 305 2e-80
ref|NP_001064595.1| Os10g0414500 [Oryza sativa Japonica Group] g... 290 4e-76
>ref|XP_002510449.1| uroporphyrin-III methyltransferase, putative [Ricinus communis]
gi|223551150|gb|EEF52636.1| uroporphyrin-III
methyltransferase, putative [Ricinus communis]
Length = 363
Score = 306 bits (784), Expect(2) = 4e-91
Identities = 155/226 (68%), Positives = 176/226 (77%)
Frame = +2
Query: 107 LSYHKFNESQREESILKRLQEGDIVALISDAGTPGISDPGTELAKLCVKEKIPVIPIPGP 286
LSYHKFNESQRE +LKRL++G+IVALISDAG PGISDPG +LAKLCV E IPVIPIPGP
Sbjct: 129 LSYHKFNESQRECLVLKRLKQGEIVALISDAGMPGISDPGAQLAKLCVDENIPVIPIPGP 188
Query: 287 XXXXXXXXXXXXXTVEFTFVGFLPKHAASRKERLLVSATQTVTQIFYVPPHKFQQFLEET 466
T EFTFVGFL KHA SR+ERL+ SA +T TQIFYVPPHK +FL+ET
Sbjct: 189 SAVVAAISASGLSTDEFTFVGFLSKHARSRRERLIASADETRTQIFYVPPHKLSRFLDET 248
Query: 467 SALFGDARKCVIAREITKVHEEFWRGTLSEAKEAFSAHQPKGEITVLIEGKEISVDETPS 646
S LFGD+R+CVIARE+TK+HEEFWRGTL EAKEAF+ HQPKGEIT+LIEGK + ETPS
Sbjct: 249 STLFGDSRRCVIAREMTKIHEEFWRGTLGEAKEAFADHQPKGEITLLIEGKINCLVETPS 308
Query: 647 EAQLEHELSDLISSGHSLSMAXXXXXXXXXXXXXXXYTLALRKFGK 784
E+QLEH+L DLIS+GHSLSMA Y+LALRKFGK
Sbjct: 309 ESQLEHDLGDLISNGHSLSMAVKLVAEGTSMKRKTLYSLALRKFGK 354
Score = 56.6 bits (135), Expect(2) = 4e-91
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = +3
Query: 3 ALRVLKSANVILSEDTRHSGKLLQHYNIKTPLI 101
ALRVLKSA VIL+EDTRHSGKLL +YNI TPL+
Sbjct: 97 ALRVLKSAQVILAEDTRHSGKLLHYYNITTPLL 129
>emb|CBI19761.3| unnamed protein product [Vitis vinifera]
Length = 374
Score = 320 bits (819), Expect = 6e-85
Identities = 164/248 (66%), Positives = 183/248 (73%)
Frame = +2
Query: 59 REIASALQHQDSSYFQLSYHKFNESQREESILKRLQEGDIVALISDAGTPGISDPGTELA 238
R LQH D LSYHKFNES+RE+++LKRL+EGDIVALISDAGTPGISDPG ELA
Sbjct: 124 RHSGKLLQHYDIKTPLLSYHKFNESRREQTVLKRLREGDIVALISDAGTPGISDPGMELA 183
Query: 239 KLCVKEKIPVIPIPGPXXXXXXXXXXXXXTVEFTFVGFLPKHAASRKERLLVSATQTVTQ 418
KLCV E IPVIPIPGP T EFTFVGFLPKHA SR+ERL VSA + TQ
Sbjct: 184 KLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAATQ 243
Query: 419 IFYVPPHKFQQFLEETSALFGDARKCVIAREITKVHEEFWRGTLSEAKEAFSAHQPKGEI 598
+F+VPPHK QFLEETS+LFGD R+CVIARE+TK+HEEFWRGTL +AKEAFS H PKGEI
Sbjct: 244 VFFVPPHKLHQFLEETSSLFGDTRRCVIAREMTKIHEEFWRGTLGKAKEAFSNHHPKGEI 303
Query: 599 TVLIEGKEISVDETPSEAQLEHELSDLISSGHSLSMAXXXXXXXXXXXXXXXYTLALRKF 778
T+LIEGKE V E PSE QLE++L DLIS GHSLSMA Y+LALRKF
Sbjct: 304 TLLIEGKESCVVENPSEFQLENKLGDLISKGHSLSMAVKLVAEGTSMRRKTIYSLALRKF 363
Query: 779 GKLQGGEE 802
GK E+
Sbjct: 364 GKQLEAED 371
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 3 ALRVLKSANVILSEDTRHSGKLLQHYNIKTPLI 101
ALRVL+SANVILSEDTRHSGKLLQHY+IKTPL+
Sbjct: 108 ALRVLRSANVILSEDTRHSGKLLQHYDIKTPLL 140
>ref|XP_002281008.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
[Vitis vinifera]
Length = 351
Score = 320 bits (819), Expect = 6e-85
Identities = 164/248 (66%), Positives = 183/248 (73%)
Frame = +2
Query: 59 REIASALQHQDSSYFQLSYHKFNESQREESILKRLQEGDIVALISDAGTPGISDPGTELA 238
R LQH D LSYHKFNES+RE+++LKRL+EGDIVALISDAGTPGISDPG ELA
Sbjct: 101 RHSGKLLQHYDIKTPLLSYHKFNESRREQTVLKRLREGDIVALISDAGTPGISDPGMELA 160
Query: 239 KLCVKEKIPVIPIPGPXXXXXXXXXXXXXTVEFTFVGFLPKHAASRKERLLVSATQTVTQ 418
KLCV E IPVIPIPGP T EFTFVGFLPKHA SR+ERL VSA + TQ
Sbjct: 161 KLCVDENIPVIPIPGPSALVAALSASGLATNEFTFVGFLPKHAGSRRERLTVSANEAATQ 220
Query: 419 IFYVPPHKFQQFLEETSALFGDARKCVIAREITKVHEEFWRGTLSEAKEAFSAHQPKGEI 598
+F+VPPHK QFLEETS+LFGD R+CVIARE+TK+HEEFWRGTL +AKEAFS H PKGEI
Sbjct: 221 VFFVPPHKLHQFLEETSSLFGDTRRCVIAREMTKIHEEFWRGTLGKAKEAFSNHHPKGEI 280
Query: 599 TVLIEGKEISVDETPSEAQLEHELSDLISSGHSLSMAXXXXXXXXXXXXXXXYTLALRKF 778
T+LIEGKE V E PSE QLE++L DLIS GHSLSMA Y+LALRKF
Sbjct: 281 TLLIEGKESCVVENPSEFQLENKLGDLISKGHSLSMAVKLVAEGTSMRRKTIYSLALRKF 340
Query: 779 GKLQGGEE 802
GK E+
Sbjct: 341 GKQLEAED 348
Score = 63.5 bits (153), Expect = 1e-07
Identities = 30/33 (90%), Positives = 33/33 (100%)
Frame = +3
Query: 3 ALRVLKSANVILSEDTRHSGKLLQHYNIKTPLI 101
ALRVL+SANVILSEDTRHSGKLLQHY+IKTPL+
Sbjct: 85 ALRVLRSANVILSEDTRHSGKLLQHYDIKTPLL 117
>ref|XP_004152680.1| PREDICTED: ribosomal RNA small subunit methyltransferase I-like
[Cucumis sativus] gi|449515758|ref|XP_004164915.1|
PREDICTED: ribosomal RNA small subunit methyltransferase
I-like [Cucumis sativus]
Length = 365
Score = 305 bits (781), Expect = 2e-80
Identities = 155/247 (62%), Positives = 183/247 (74%)
Frame = +2
Query: 59 REIASALQHQDSSYFQLSYHKFNESQREESILKRLQEGDIVALISDAGTPGISDPGTELA 238
R LQH LS+HKFNESQRE+++LKRL++G+IVALISDAGTPGISDPGTEL
Sbjct: 114 RHSGKLLQHFSIKTPLLSFHKFNESQREQTVLKRLKQGEIVALISDAGTPGISDPGTELV 173
Query: 239 KLCVKEKIPVIPIPGPXXXXXXXXXXXXXTVEFTFVGFLPKHAASRKERLLVSATQTVTQ 418
+LCV E IPV+P+PGP T EFTFVGFLPKHAASR+ERL+VSA + TQ
Sbjct: 174 RLCVNENIPVVPVPGPSAVVAAISASGLSTDEFTFVGFLPKHAASRRERLMVSANEEATQ 233
Query: 419 IFYVPPHKFQQFLEETSALFGDARKCVIAREITKVHEEFWRGTLSEAKEAFSAHQPKGEI 598
IFYVPPHK +QFLEETS LFG++R+CVIARE+TK+HEEFWRGTL+EAKE FS +Q KGEI
Sbjct: 234 IFYVPPHKLKQFLEETSQLFGESRRCVIAREMTKIHEEFWRGTLAEAKEFFSLNQTKGEI 293
Query: 599 TVLIEGKEISVDETPSEAQLEHELSDLISSGHSLSMAXXXXXXXXXXXXXXXYTLALRKF 778
T+LIEGK ETPSE+QLE EL +LIS+GH LSMA Y++ALR+F
Sbjct: 294 TLLIEGKLCPEVETPSESQLEKELEELISTGHRLSMAVKLVASKTSTSRKTVYSIALRRF 353
Query: 779 GKLQGGE 799
G G E
Sbjct: 354 GNQLGVE 360
Score = 61.2 bits (147), Expect = 5e-07
Identities = 29/33 (87%), Positives = 33/33 (100%)
Frame = +3
Query: 3 ALRVLKSANVILSEDTRHSGKLLQHYNIKTPLI 101
ALRVLKSA+VILSEDTRHSGKLLQH++IKTPL+
Sbjct: 98 ALRVLKSAHVILSEDTRHSGKLLQHFSIKTPLL 130
>ref|NP_001064595.1| Os10g0414500 [Oryza sativa Japonica Group]
gi|78708633|gb|ABB47608.1| expressed protein [Oryza
sativa Japonica Group] gi|110289078|gb|ABG66076.1|
expressed protein [Oryza sativa Japonica Group]
gi|113639204|dbj|BAF26509.1| Os10g0414500 [Oryza sativa
Japonica Group] gi|215695389|dbj|BAG90580.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|222612824|gb|EEE50956.1| hypothetical protein
OsJ_31511 [Oryza sativa Japonica Group]
Length = 335
Score = 290 bits (743), Expect = 4e-76
Identities = 151/242 (62%), Positives = 168/242 (69%)
Frame = +2
Query: 59 REIASALQHQDSSYFQLSYHKFNESQREESILKRLQEGDIVALISDAGTPGISDPGTELA 238
R LQH + LS+HKFNE +RE +ILKRL EG+ VALISDAGTPGISDPG ELA
Sbjct: 94 RHSGKLLQHYNIKTPLLSFHKFNEREREPNILKRLHEGEAVALISDAGTPGISDPGMELA 153
Query: 239 KLCVKEKIPVIPIPGPXXXXXXXXXXXXXTVEFTFVGFLPKHAASRKERLLVSATQTVTQ 418
+LC E IPVIPIPGP T EFTFVGFLPKHA SRKERL +SA Q TQ
Sbjct: 154 RLCATEGIPVIPIPGPSAAIAALSASGLPTDEFTFVGFLPKHARSRKERLEISACQAATQ 213
Query: 419 IFYVPPHKFQQFLEETSALFGDARKCVIAREITKVHEEFWRGTLSEAKEAFSAHQPKGEI 598
IFYVPPH QFL + ++ FGD+R CVIAREITK+HEEFWRGT+ EA EAF+ QPKGEI
Sbjct: 214 IFYVPPHGIHQFLSDAASSFGDSRSCVIAREITKLHEEFWRGTIGEANEAFATRQPKGEI 273
Query: 599 TVLIEGKEISVDETPSEAQLEHELSDLISSGHSLSMAXXXXXXXXXXXXXXXYTLALRKF 778
TVLIEGK IS DETPSE LEHEL +L++ GH LS A Y LALR F
Sbjct: 274 TVLIEGKLISADETPSEDFLEHELRELMTQGHPLSAAVKMVSEATSAKKKDVYALALRLF 333
Query: 779 GK 784
GK
Sbjct: 334 GK 335
Score = 62.4 bits (150), Expect = 2e-07
Identities = 29/33 (87%), Positives = 32/33 (96%)
Frame = +3
Query: 3 ALRVLKSANVILSEDTRHSGKLLQHYNIKTPLI 101
ALR+LK A+VILSEDTRHSGKLLQHYNIKTPL+
Sbjct: 78 ALRILKCADVILSEDTRHSGKLLQHYNIKTPLL 110