BLASTX nr result
ID: Coptis25_contig00021691
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00021691 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinu... 72 4e-11 ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloproteas... 67 2e-09 ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thalia... 66 3e-09 ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloproteas... 61 1e-07 >ref|XP_002509985.1| Cell division protein ftsH, putative [Ricinus communis] gi|223549884|gb|EEF51372.1| Cell division protein ftsH, putative [Ricinus communis] Length = 925 Score = 72.4 bits (176), Expect = 4e-11 Identities = 40/76 (52%), Positives = 46/76 (60%), Gaps = 1/76 (1%) Frame = -3 Query: 225 PLPAHSKNLHFTRNIKRTPFLLHRSFTVYCNANYDSVSSRS-ISKDDFITRVLKENPSQV 49 P + K+L T I+ L RSFT C N S S S KD F+TRVLKENPSQ+ Sbjct: 14 PPKTYRKSLQCTPIIRPKATFLRRSFTALCGLNSSSESQPSDTKKDGFVTRVLKENPSQL 73 Query: 48 EPRYKIGEKIVTLSEK 1 EPRY+IGEK TL EK Sbjct: 74 EPRYRIGEKFYTLKEK 89 >ref|XP_004162678.1| PREDICTED: ATP-dependent zinc metalloprotease FtsH 2-like [Cucumis sativus] Length = 962 Score = 67.0 bits (162), Expect = 2e-09 Identities = 53/116 (45%), Positives = 66/116 (56%), Gaps = 10/116 (8%) Frame = -3 Query: 318 MKTSDLFLSHRVSFHPQCEINRTPISKVSSIPLPAH--SKNLHFTRNIKRTPFL-LHRSF 148 M + D LS RV F PQ N P++ P H ++ +FTRN RTPFL LH + Sbjct: 1 MASIDSLLSPRV-FLPQSSFN--PLT-----PRLNHLQTQRFNFTRN-PRTPFLFLHPNR 51 Query: 147 TVYCNANYDSVSSRSIS-------KDDFITRVLKENPSQVEPRYKIGEKIVTLSEK 1 +C A S S S S + DF+TRVLKENPSQ+EPRY IG+K+ TL EK Sbjct: 52 FAFCLAVSKSSDSPSQSSGGDKAAQHDFVTRVLKENPSQLEPRYLIGDKLYTLKEK 107 >ref|NP_567691.1| FtsH extracellular protease [Arabidopsis thaliana] gi|2262118|gb|AAB63626.1| cell division protein isolog [Arabidopsis thaliana] gi|4972098|emb|CAB43894.1| cell division protein-like [Arabidopsis thaliana] gi|7269243|emb|CAB81312.1| cell division protein-like [Arabidopsis thaliana] gi|332659430|gb|AEE84830.1| FtsH extracellular protease [Arabidopsis thaliana] Length = 946 Score = 65.9 bits (159), Expect = 3e-09 Identities = 33/59 (55%), Positives = 41/59 (69%), Gaps = 4/59 (6%) Frame = -3 Query: 165 LLHRSFTVYCNANYDSVSS----RSISKDDFITRVLKENPSQVEPRYKIGEKIVTLSEK 1 +L RSFTV C S SS S + DDF+TRVLKENPSQVEPRY++G+K+ L E+ Sbjct: 45 ILRRSFTVLCELKTGSSSSGETNNSPAADDFVTRVLKENPSQVEPRYRVGDKLYNLKER 103 >ref|XP_002299463.1| predicted protein [Populus trichocarpa] gi|222846721|gb|EEE84268.1| predicted protein [Populus trichocarpa] Length = 932 Score = 64.3 bits (155), Expect = 1e-08 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = -3 Query: 228 IPLPAHSKNLHFTRNIKRTPFLLHRSFTVYCNANYDSVS-SRSISKDDFITRVLKENPSQ 52 +P P + K L + L+RS TV C N S + S +K+DF+TRVLK+NPSQ Sbjct: 14 LPKP-YKKPLKSPPKFRSKTLFLNRSLTVLCEVNSASTAQSGDTNKEDFVTRVLKQNPSQ 72 Query: 51 VEPRYKIGEKIVTLSEK 1 +EPRY IG+K T EK Sbjct: 73 IEPRYLIGDKFYTSKEK 89 >ref|XP_003532440.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic-like [Glycine max] Length = 925 Score = 60.8 bits (146), Expect = 1e-07 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 7/67 (10%) Frame = -3 Query: 180 KRTP-------FLLHRSFTVYCNANYDSVSSRSISKDDFITRVLKENPSQVEPRYKIGEK 22 KRTP LL RS TV C + S ++ DDF++RVLKENPSQV+P+Y IG+K Sbjct: 24 KRTPRHVPTQLLLLRRSPTVLCKS---SSATNEPGSDDFVSRVLKENPSQVQPKYLIGDK 80 Query: 21 IVTLSEK 1 + TL EK Sbjct: 81 LYTLKEK 87