BLASTX nr result

ID: Coptis25_contig00021689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00021689
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306353.1| ABC transporter family protein [Populus tric...   191   4e-47
ref|XP_002310031.1| ABC transporter family protein [Populus tric...   191   4e-47
emb|CBI21514.3| unnamed protein product [Vitis vinifera]              191   7e-47
ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5...   191   7e-47
ref|XP_003602495.1| ABC transporter F family member [Medicago tr...   190   9e-47

>ref|XP_002306353.1| ABC transporter family protein [Populus trichocarpa]
           gi|222855802|gb|EEE93349.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 722

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/98 (95%), Positives = 96/98 (97%)
 Frame = -3

Query: 296 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVL 117
           DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY+GTV+
Sbjct: 546 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYKGTVI 605

Query: 116 TVSHDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYLEKN 3
           TVSHDRYFIKQIVNRVVEVKD  LQDYAGDYNYYLEKN
Sbjct: 606 TVSHDRYFIKQIVNRVVEVKDGKLQDYAGDYNYYLEKN 643



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/92 (34%), Positives = 57/92 (61%)
 Frame = -3

Query: 287 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVLTVS 108
           DR V+  S G + R++  K +++   LL+LDEPTNHLD+ + E LE  + + +  ++ +S
Sbjct: 265 DRLVAAFSSGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQDVPMVIIS 324

Query: 107 HDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYL 12
           HDR F+ Q+  ++VE      + + G+Y+ Y+
Sbjct: 325 HDRAFLDQLCTKIVETDMGVSRTFEGNYSQYI 356


>ref|XP_002310031.1| ABC transporter family protein [Populus trichocarpa]
           gi|222852934|gb|EEE90481.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 635

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/98 (95%), Positives = 96/98 (97%)
 Frame = -3

Query: 296 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVL 117
           DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEY GTV+
Sbjct: 478 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYSGTVI 537

Query: 116 TVSHDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYLEKN 3
           TVSHDRYFIKQIVNRVVEVKD+ LQDYAGDYNYYLEKN
Sbjct: 538 TVSHDRYFIKQIVNRVVEVKDDKLQDYAGDYNYYLEKN 575



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/92 (35%), Positives = 58/92 (63%)
 Frame = -3

Query: 287 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVLTVS 108
           DR V+  SGG + R++  K +++   LL+LDEPTNHLD+ + E LE  + + +  ++ +S
Sbjct: 197 DRLVASFSGGWQMRMSLGKILLQDPDLLLLDEPTNHLDLDTIEWLEGYLQKQDVPMVIIS 256

Query: 107 HDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYL 12
           HDR F+ Q+  ++VE      + + G+Y+ Y+
Sbjct: 257 HDRAFLDQLCTKIVETDMGVSRTFEGNYSQYI 288


>emb|CBI21514.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/98 (93%), Positives = 97/98 (98%)
 Frame = -3

Query: 296 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVL 117
           DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIP+KEMLEEAI+EY+GTV+
Sbjct: 498 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPTKEMLEEAITEYKGTVV 557

Query: 116 TVSHDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYLEKN 3
           TVSHDRYFIKQIVNRV+EVKD NLQDYAGDYNYYLEKN
Sbjct: 558 TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLEKN 595



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/92 (35%), Positives = 58/92 (63%)
 Frame = -3

Query: 287 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVLTVS 108
           DR V+  S G + R++  K +++   LL+LDEPTNHLD+ + E LE  +++ +  ++ +S
Sbjct: 217 DRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIIS 276

Query: 107 HDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYL 12
           HDR F+ Q+  ++VE      + Y G+Y+ Y+
Sbjct: 277 HDRAFLDQLCTKIVETDMGVSRTYEGNYSQYV 308


>ref|XP_002279804.1| PREDICTED: ABC transporter F family member 5 [Vitis vinifera]
          Length = 718

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/98 (93%), Positives = 97/98 (98%)
 Frame = -3

Query: 296 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVL 117
           DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIP+KEMLEEAI+EY+GTV+
Sbjct: 561 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPTKEMLEEAITEYKGTVV 620

Query: 116 TVSHDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYLEKN 3
           TVSHDRYFIKQIVNRV+EVKD NLQDYAGDYNYYLEKN
Sbjct: 621 TVSHDRYFIKQIVNRVIEVKDGNLQDYAGDYNYYLEKN 658



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/92 (35%), Positives = 58/92 (63%)
 Frame = -3

Query: 287 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVLTVS 108
           DR V+  S G + R++  K +++   LL+LDEPTNHLD+ + E LE  +++ +  ++ +S
Sbjct: 280 DRLVASFSSGWQMRMSLGKILLQEPDLLLLDEPTNHLDLDTIEWLEGYLNKQDVPMVIIS 339

Query: 107 HDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYL 12
           HDR F+ Q+  ++VE      + Y G+Y+ Y+
Sbjct: 340 HDRAFLDQLCTKIVETDMGVSRTYEGNYSQYV 371


>ref|XP_003602495.1| ABC transporter F family member [Medicago truncatula]
           gi|355491543|gb|AES72746.1| ABC transporter F family
           member [Medicago truncatula]
          Length = 700

 Score =  190 bits (483), Expect = 9e-47
 Identities = 92/98 (93%), Positives = 96/98 (97%)
 Frame = -3

Query: 296 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVL 117
           DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAI+EYEGTV+
Sbjct: 543 DMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAITEYEGTVI 602

Query: 116 TVSHDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYLEKN 3
           TVSHDRYFIKQIVNRV+EVKD  +QDYAGDYNYYLEKN
Sbjct: 603 TVSHDRYFIKQIVNRVIEVKDGTVQDYAGDYNYYLEKN 640



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 33/92 (35%), Positives = 58/92 (63%)
 Frame = -3

Query: 287 DRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAISEYEGTVLTVS 108
           DR V+  SGG + R+   K +++   LL+LDEPTNHLD+ + E LE+ ++  +  ++ +S
Sbjct: 262 DRLVASFSGGWQMRMCLGKILLQEPDLLLLDEPTNHLDLDTIEWLEDYLNRQDVPMVIIS 321

Query: 107 HDRYFIKQIVNRVVEVKDNNLQDYAGDYNYYL 12
           HDR F+ Q+  ++VE      + + G+Y+ Y+
Sbjct: 322 HDRAFLDQLCTKIVETDMGVSRTFEGNYSQYI 353


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